Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 AC154548.1-201ENSMUST00000225844 3838 ntBASIC5.39□□□□□ -1.55
Trim11Q99PQ2 AC158142.2-201ENSMUST00000227892 635 ntBASIC5.39□□□□□ -1.55
Trim11Q99PQ2 AC133910.1-201ENSMUST00000228128 624 ntBASIC5.39□□□□□ -1.55
Trim11Q99PQ2 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Trim11Q99PQ2 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Trim11Q99PQ2 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Trim11Q99PQ2 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC5.39□□□□□ -1.55
Trim11Q99PQ2 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Trim11Q99PQ2 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Trim11Q99PQ2 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Trim11Q99PQ2 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Trim11Q99PQ2 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC5.39□□□□□ -1.55
Trim11Q99PQ2 Gm38212-201ENSMUST00000194081 2756 ntBASIC5.38□□□□□ -1.55
Trim11Q99PQ2 Gm37733-201ENSMUST00000195478 2962 ntBASIC5.38□□□□□ -1.55
Trim11Q99PQ2 AC131743.1-201ENSMUST00000222138 4024 ntBASIC5.38□□□□□ -1.55
Trim11Q99PQ2 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Trim11Q99PQ2 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Trim11Q99PQ2 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Trim11Q99PQ2 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Trim11Q99PQ2 Gm36298-201ENSMUST00000223394 1732 ntBASIC5.38□□□□□ -1.55
Trim11Q99PQ2 Gm8145-201ENSMUST00000118220 745 ntBASIC5.38□□□□□ -1.55
Trim11Q99PQ2 Gm11384-201ENSMUST00000121376 303 ntBASIC5.38□□□□□ -1.55
Trim11Q99PQ2 Gm22718-201ENSMUST00000122701 315 ntBASIC5.38□□□□□ -1.55
Trim11Q99PQ2 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC5.38□□□□□ -1.55
Trim11Q99PQ2 Gm25906-201ENSMUST00000158489 126 ntBASIC5.38□□□□□ -1.55
Trim11Q99PQ2 Mir3964-201ENSMUST00000174898 74 ntBASIC5.38□□□□□ -1.55
Trim11Q99PQ2 Gm7656-201ENSMUST00000182468 1004 ntBASIC5.38□□□□□ -1.55
Trim11Q99PQ2 Gm2522-201ENSMUST00000204280 322 ntBASIC5.38□□□□□ -1.55
Trim11Q99PQ2 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim11Q99PQ2 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC5.38□□□□□ -1.55
Trim11Q99PQ2 Gm40692-201ENSMUST00000220411 491 ntBASIC5.38□□□□□ -1.55
Trim11Q99PQ2 CT009718.4-201ENSMUST00000221881 109 ntBASIC5.38□□□□□ -1.55
Trim11Q99PQ2 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim11Q99PQ2 AC154305.1-201ENSMUST00000224443 450 ntBASIC5.38□□□□□ -1.55
Trim11Q99PQ2 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Trim11Q99PQ2 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Trim11Q99PQ2 n-R5s152-201ENSMUST00000093641 119 ntBASIC5.38□□□□□ -1.55
Trim11Q99PQ2 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Trim11Q99PQ2 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Trim11Q99PQ2 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Trim11Q99PQ2 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Trim11Q99PQ2 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Trim11Q99PQ2 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim11Q99PQ2 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim11Q99PQ2 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim11Q99PQ2 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Trim11Q99PQ2 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Trim11Q99PQ2 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC5.37□□□□□ -1.55
Trim11Q99PQ2 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim11Q99PQ2 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Trim11Q99PQ2 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Trim11Q99PQ2 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC5.37□□□□□ -1.55
Trim11Q99PQ2 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim11Q99PQ2 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Trim11Q99PQ2 Gm2123-201ENSMUST00000221476 2836 ntBASIC5.37□□□□□ -1.55
Trim11Q99PQ2 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC5.37□□□□□ -1.55
Trim11Q99PQ2 Gm14577-201ENSMUST00000121134 256 ntBASIC5.37□□□□□ -1.55
Trim11Q99PQ2 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Trim11Q99PQ2 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Trim11Q99PQ2 Gm26153-201ENSMUST00000157433 127 ntBASIC5.37□□□□□ -1.55
Trim11Q99PQ2 Gm23078-201ENSMUST00000157848 148 ntBASIC5.37□□□□□ -1.55
Trim11Q99PQ2 Gm26400-201ENSMUST00000175012 85 ntBASIC5.37□□□□□ -1.55
Trim11Q99PQ2 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC5.37□□□□□ -1.55
Trim11Q99PQ2 Gm42566-201ENSMUST00000197120 643 ntBASIC5.37□□□□□ -1.55
Trim11Q99PQ2 Gm43651-201ENSMUST00000199796 439 ntBASIC5.37□□□□□ -1.55
Trim11Q99PQ2 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC5.37□□□□□ -1.55
Trim11Q99PQ2 AC157570.3-201ENSMUST00000219281 205 ntBASIC5.37□□□□□ -1.55
Trim11Q99PQ2 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC5.37□□□□□ -1.55
Trim11Q99PQ2 Gm6988-201ENSMUST00000222676 375 ntBASIC5.37□□□□□ -1.55
Trim11Q99PQ2 AC159252.1-201ENSMUST00000224450 553 ntBASIC5.37□□□□□ -1.55
Trim11Q99PQ2 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Trim11Q99PQ2 AC165284.1-201ENSMUST00000228614 458 ntBASIC5.37□□□□□ -1.55
Trim11Q99PQ2 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Trim11Q99PQ2 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim11Q99PQ2 Gm25140-201ENSMUST00000083254 140 ntBASIC5.37□□□□□ -1.55
Trim11Q99PQ2 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim11Q99PQ2 Gm43654-201ENSMUST00000200664 3417 ntBASIC5.37□□□□□ -1.55
Trim11Q99PQ2 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Trim11Q99PQ2 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Trim11Q99PQ2 Gm38091-201ENSMUST00000192418 3871 ntBASIC5.37□□□□□ -1.55
Trim11Q99PQ2 Gm42704-201ENSMUST00000196875 1778 ntBASIC5.37□□□□□ -1.55
Trim11Q99PQ2 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Trim11Q99PQ2 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Trim11Q99PQ2 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Trim11Q99PQ2 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
Trim11Q99PQ2 AC155805.1-201ENSMUST00000222419 3808 ntBASIC5.36□□□□□ -1.55
Trim11Q99PQ2 Gm43888-201ENSMUST00000204405 2587 ntBASIC5.36□□□□□ -1.55
Trim11Q99PQ2 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trim11Q99PQ2 Gm25919-201ENSMUST00000104271 132 ntBASIC5.36□□□□□ -1.55
Trim11Q99PQ2 Gm14823-201ENSMUST00000117698 238 ntBASIC5.36□□□□□ -1.55
Trim11Q99PQ2 Gm25106-201ENSMUST00000122672 134 ntBASIC5.36□□□□□ -1.55
Trim11Q99PQ2 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Trim11Q99PQ2 Gm23829-201ENSMUST00000157392 270 ntBASIC5.36□□□□□ -1.55
Trim11Q99PQ2 Gm24240-201ENSMUST00000157785 135 ntBASIC5.36□□□□□ -1.55
Trim11Q99PQ2 Gm24409-201ENSMUST00000157881 152 ntBASIC5.36□□□□□ -1.55
Trim11Q99PQ2 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC5.36□□□□□ -1.55
Trim11Q99PQ2 Gm23402-201ENSMUST00000178130 107 ntBASIC5.36□□□□□ -1.55
Trim11Q99PQ2 Gm22633-201ENSMUST00000179834 107 ntBASIC5.36□□□□□ -1.55
Trim11Q99PQ2 Gm26189-201ENSMUST00000179879 107 ntBASIC5.36□□□□□ -1.55
Trim11Q99PQ2 Gm27543-201ENSMUST00000183562 177 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 131.9 ms