Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm12578-201ENSMUST00000121244 417 ntBASIC4.5□□□□□ -1.69
Ccdc9Q8VC31 Gm25808-201ENSMUST00000122784 284 ntBASIC4.5□□□□□ -1.69
Ccdc9Q8VC31 Mup-ps12-201ENSMUST00000126217 549 ntBASIC4.5□□□□□ -1.69
Ccdc9Q8VC31 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC4.5□□□□□ -1.69
Ccdc9Q8VC31 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC4.5□□□□□ -1.69
Ccdc9Q8VC31 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC4.5□□□□□ -1.69
Ccdc9Q8VC31 Gm24734-201ENSMUST00000158860 262 ntBASIC4.5□□□□□ -1.69
Ccdc9Q8VC31 Gm16101-201ENSMUST00000160695 430 ntBASIC4.5□□□□□ -1.69
Ccdc9Q8VC31 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Ccdc9Q8VC31 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC4.5□□□□□ -1.69
Ccdc9Q8VC31 Gm27899-201ENSMUST00000184715 64 ntBASIC4.5□□□□□ -1.69
Ccdc9Q8VC31 Mir6914-201ENSMUST00000184999 69 ntBASIC4.5□□□□□ -1.69
Ccdc9Q8VC31 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC4.5□□□□□ -1.69
Ccdc9Q8VC31 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC4.5□□□□□ -1.69
Ccdc9Q8VC31 Gm28148-201ENSMUST00000186924 697 ntBASIC4.5□□□□□ -1.69
Ccdc9Q8VC31 Gm37670-201ENSMUST00000193622 229 ntBASIC4.5□□□□□ -1.69
Ccdc9Q8VC31 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Ccdc9Q8VC31 Gm17893-201ENSMUST00000203017 770 ntBASIC4.5□□□□□ -1.69
Ccdc9Q8VC31 Gm45228-201ENSMUST00000206585 352 ntBASIC4.5□□□□□ -1.69
Ccdc9Q8VC31 Gm44650-201ENSMUST00000206929 194 ntBASIC4.5□□□□□ -1.69
Ccdc9Q8VC31 AC116460.1-201ENSMUST00000219040 313 ntBASIC4.5□□□□□ -1.69
Ccdc9Q8VC31 AC090496.1-201ENSMUST00000226020 260 ntBASIC4.5□□□□□ -1.69
Ccdc9Q8VC31 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Ccdc9Q8VC31 Gm5185-201ENSMUST00000080271 619 ntBASIC4.5□□□□□ -1.69
Ccdc9Q8VC31 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
Ccdc9Q8VC31 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Ccdc9Q8VC31 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC4.5□□□□□ -1.69
Ccdc9Q8VC31 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
Ccdc9Q8VC31 AC154511.1-201ENSMUST00000222578 1587 ntBASIC4.49□□□□□ -1.69
Ccdc9Q8VC31 Gm26273-201ENSMUST00000104180 131 ntBASIC4.49□□□□□ -1.69
Ccdc9Q8VC31 Gm22072-201ENSMUST00000116850 121 ntBASIC4.49□□□□□ -1.69
Ccdc9Q8VC31 Gm13733-201ENSMUST00000117290 535 ntBASIC4.49□□□□□ -1.69
Ccdc9Q8VC31 Gm7916-201ENSMUST00000120325 456 ntBASIC4.49□□□□□ -1.69
Ccdc9Q8VC31 Gm26024-201ENSMUST00000158657 322 ntBASIC4.49□□□□□ -1.69
Ccdc9Q8VC31 Gm18604-201ENSMUST00000172535 558 ntBASIC4.49□□□□□ -1.69
Ccdc9Q8VC31 Gm17919-201ENSMUST00000173344 312 ntBASIC4.49□□□□□ -1.69
Ccdc9Q8VC31 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC4.49□□□□□ -1.69
Ccdc9Q8VC31 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC4.49□□□□□ -1.69
Ccdc9Q8VC31 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Ccdc9Q8VC31 Mir6414-201ENSMUST00000183685 82 ntBASIC4.49□□□□□ -1.69
Ccdc9Q8VC31 Gm37836-201ENSMUST00000195875 175 ntBASIC4.49□□□□□ -1.69
Ccdc9Q8VC31 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC4.49□□□□□ -1.69
Ccdc9Q8VC31 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.49□□□□□ -1.69
Ccdc9Q8VC31 Gm42453-201ENSMUST00000200477 409 ntBASIC4.49□□□□□ -1.69
Ccdc9Q8VC31 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC4.49□□□□□ -1.69
Ccdc9Q8VC31 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC4.49□□□□□ -1.69
Ccdc9Q8VC31 Gm44910-201ENSMUST00000208451 396 ntBASIC4.49□□□□□ -1.69
Ccdc9Q8VC31 Gm18320-201ENSMUST00000211304 595 ntBASIC4.49□□□□□ -1.69
Ccdc9Q8VC31 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Ccdc9Q8VC31 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Ccdc9Q8VC31 Gm22444-201ENSMUST00000093693 108 ntBASIC4.49□□□□□ -1.69
Ccdc9Q8VC31 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Ccdc9Q8VC31 Gm44842-201ENSMUST00000209173 3372 ntBASIC4.49□□□□□ -1.69
Ccdc9Q8VC31 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC4.49□□□□□ -1.69
Ccdc9Q8VC31 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC4.49□□□□□ -1.69
Ccdc9Q8VC31 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Ccdc9Q8VC31 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Ccdc9Q8VC31 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Ccdc9Q8VC31 Mir669i-201ENSMUST00000117007 127 ntBASIC4.48□□□□□ -1.69
Ccdc9Q8VC31 Gm22199-201ENSMUST00000122660 126 ntBASIC4.48□□□□□ -1.69
Ccdc9Q8VC31 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Ccdc9Q8VC31 Gm25913-201ENSMUST00000157617 135 ntBASIC4.48□□□□□ -1.69
Ccdc9Q8VC31 Gm24438-201ENSMUST00000157893 115 ntBASIC4.48□□□□□ -1.69
Ccdc9Q8VC31 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Ccdc9Q8VC31 Gm3111-201ENSMUST00000167426 490 ntBASIC4.48□□□□□ -1.69
Ccdc9Q8VC31 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Ccdc9Q8VC31 Gm13249-201ENSMUST00000177803 345 ntBASIC4.48□□□□□ -1.69
Ccdc9Q8VC31 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC4.48□□□□□ -1.69
Ccdc9Q8VC31 Gm6802-202ENSMUST00000186566 126 ntBASIC4.48□□□□□ -1.69
Ccdc9Q8VC31 Gm29105-201ENSMUST00000187256 450 ntBASIC4.48□□□□□ -1.69
Ccdc9Q8VC31 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC4.48□□□□□ -1.69
Ccdc9Q8VC31 Gm34091-201ENSMUST00000200875 604 ntBASIC4.48□□□□□ -1.69
Ccdc9Q8VC31 Gm35876-201ENSMUST00000205044 459 ntBASIC4.48□□□□□ -1.69
Ccdc9Q8VC31 Gm45427-201ENSMUST00000209572 1253 ntBASIC4.48□□□□□ -1.69
Ccdc9Q8VC31 AC109212.1-201ENSMUST00000215561 427 ntBASIC4.48□□□□□ -1.69
Ccdc9Q8VC31 Gm19219-201ENSMUST00000215863 724 ntBASIC4.48□□□□□ -1.69
Ccdc9Q8VC31 AC151843.1-201ENSMUST00000215960 691 ntBASIC4.48□□□□□ -1.69
Ccdc9Q8VC31 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC4.48□□□□□ -1.69
Ccdc9Q8VC31 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Ccdc9Q8VC31 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Ccdc9Q8VC31 Gm43751-201ENSMUST00000200275 3071 ntBASIC4.47□□□□□ -1.69
Ccdc9Q8VC31 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Ccdc9Q8VC31 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Ccdc9Q8VC31 Gm26384-201ENSMUST00000102183 110 ntBASIC4.47□□□□□ -1.69
Ccdc9Q8VC31 Igkv13-87-201ENSMUST00000114214 286 ntBASIC4.47□□□□□ -1.69
Ccdc9Q8VC31 Gm12852-201ENSMUST00000119478 719 ntBASIC4.47□□□□□ -1.69
Ccdc9Q8VC31 Gm14574-201ENSMUST00000120644 279 ntBASIC4.47□□□□□ -1.69
Ccdc9Q8VC31 Gm15111-201ENSMUST00000122142 878 ntBASIC4.47□□□□□ -1.69
Ccdc9Q8VC31 Gm22452-201ENSMUST00000122804 104 ntBASIC4.47□□□□□ -1.69
Ccdc9Q8VC31 Gm23465-201ENSMUST00000157134 262 ntBASIC4.47□□□□□ -1.69
Ccdc9Q8VC31 Gm23435-201ENSMUST00000157183 156 ntBASIC4.47□□□□□ -1.69
Ccdc9Q8VC31 Gm25427-201ENSMUST00000157605 103 ntBASIC4.47□□□□□ -1.69
Ccdc9Q8VC31 Gm22101-201ENSMUST00000157928 103 ntBASIC4.47□□□□□ -1.69
Ccdc9Q8VC31 Gm22314-201ENSMUST00000158007 281 ntBASIC4.47□□□□□ -1.69
Ccdc9Q8VC31 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
Ccdc9Q8VC31 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Ccdc9Q8VC31 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Ccdc9Q8VC31 Mir6341-201ENSMUST00000183490 121 ntBASIC4.47□□□□□ -1.69
Ccdc9Q8VC31 Mir6899-201ENSMUST00000184798 64 ntBASIC4.47□□□□□ -1.69
Ccdc9Q8VC31 Gm8392-201ENSMUST00000185647 835 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms