Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Gm24951-201ENSMUST00000102182 109 ntBASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Mir19b-1-201ENSMUST00000102301 87 ntBASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Gm24067-201ENSMUST00000104514 85 ntBASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Gm25104-201ENSMUST00000122476 163 ntBASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Gm25784-201ENSMUST00000122524 81 ntBASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Gm22314-201ENSMUST00000158007 281 ntBASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Gm24898-201ENSMUST00000158133 106 ntBASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Gm22135-201ENSMUST00000158752 108 ntBASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Gm25365-201ENSMUST00000158852 121 ntBASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Gm23473-201ENSMUST00000158883 116 ntBASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Gm9071-201ENSMUST00000165915 474 ntBASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Gm17919-201ENSMUST00000173344 312 ntBASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Gm21815-201ENSMUST00000178213 664 ntBASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Gm27190-201ENSMUST00000184890 542 ntBASIC4.63□□□□□ -1.67
Ushbp1Q8R370 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Gm28740-201ENSMUST00000186142 215 ntBASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Gm29428-201ENSMUST00000190086 409 ntBASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Igkv2-105-201ENSMUST00000196931 377 ntBASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Gm17887-201ENSMUST00000200194 547 ntBASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.63□□□□□ -1.67
Ushbp1Q8R370 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Gm45427-201ENSMUST00000209572 1253 ntBASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC4.63□□□□□ -1.67
Ushbp1Q8R370 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Gm26206-201ENSMUST00000082908 110 ntBASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Ushbp1Q8R370 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Ushbp1Q8R370 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.62□□□□□ -1.67
Ushbp1Q8R370 Gm37887-201ENSMUST00000192752 2716 ntBASIC4.62□□□□□ -1.67
Ushbp1Q8R370 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Ushbp1Q8R370 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Ushbp1Q8R370 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Ushbp1Q8R370 Gm23322-201ENSMUST00000104464 167 ntBASIC4.62□□□□□ -1.67
Ushbp1Q8R370 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC4.62□□□□□ -1.67
Ushbp1Q8R370 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Ushbp1Q8R370 Gm4222-201ENSMUST00000165784 470 ntBASIC4.62□□□□□ -1.67
Ushbp1Q8R370 Ang-ps2-201ENSMUST00000178173 433 ntBASIC4.62□□□□□ -1.67
Ushbp1Q8R370 Gm23816-201ENSMUST00000179617 132 ntBASIC4.62□□□□□ -1.67
Ushbp1Q8R370 Gm27695-201ENSMUST00000184301 91 ntBASIC4.62□□□□□ -1.67
Ushbp1Q8R370 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC4.62□□□□□ -1.67
Ushbp1Q8R370 Gm44349-201ENSMUST00000197048 123 ntBASIC4.62□□□□□ -1.67
Ushbp1Q8R370 Gm35702-201ENSMUST00000198653 511 ntBASIC4.62□□□□□ -1.67
Ushbp1Q8R370 Gm35558-203ENSMUST00000222264 204 ntBASIC4.62□□□□□ -1.67
Ushbp1Q8R370 AC124562.1-201ENSMUST00000224673 337 ntBASIC4.62□□□□□ -1.67
Ushbp1Q8R370 AC102575.1-201ENSMUST00000225348 547 ntBASIC4.62□□□□□ -1.67
Ushbp1Q8R370 AC139350.4-201ENSMUST00000228483 798 ntBASIC4.62□□□□□ -1.67
Ushbp1Q8R370 Mir132-201ENSMUST00000083603 66 ntBASIC4.62□□□□□ -1.67
Ushbp1Q8R370 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.62□□□□□ -1.67
Ushbp1Q8R370 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Ushbp1Q8R370 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Ushbp1Q8R370 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Ushbp1Q8R370 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Ushbp1Q8R370 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC4.62□□□□□ -1.67
Ushbp1Q8R370 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Ushbp1Q8R370 Gm43923-201ENSMUST00000203992 2911 ntBASIC4.62□□□□□ -1.67
Ushbp1Q8R370 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Ushbp1Q8R370 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
Ushbp1Q8R370 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Ushbp1Q8R370 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Ushbp1Q8R370 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
Ushbp1Q8R370 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
Ushbp1Q8R370 Gm14670-201ENSMUST00000117327 337 ntBASIC4.61□□□□□ -1.67
Ushbp1Q8R370 Gm14307-201ENSMUST00000118930 291 ntBASIC4.61□□□□□ -1.67
Ushbp1Q8R370 Gm15364-201ENSMUST00000119618 585 ntBASIC4.61□□□□□ -1.67
Ushbp1Q8R370 Gm13239-201ENSMUST00000119920 637 ntBASIC4.61□□□□□ -1.67
Ushbp1Q8R370 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.61□□□□□ -1.67
Ushbp1Q8R370 Gm14297-201ENSMUST00000129110 291 ntBASIC4.61□□□□□ -1.67
Ushbp1Q8R370 Gm12226-201ENSMUST00000144172 876 ntBASIC4.61□□□□□ -1.67
Ushbp1Q8R370 Gm25970-201ENSMUST00000157165 86 ntBASIC4.61□□□□□ -1.67
Ushbp1Q8R370 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Ushbp1Q8R370 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC4.61□□□□□ -1.67
Ushbp1Q8R370 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Ushbp1Q8R370 Gm27599-201ENSMUST00000183758 174 ntBASIC4.61□□□□□ -1.67
Ushbp1Q8R370 Gm27161-201ENSMUST00000183960 562 ntBASIC4.61□□□□□ -1.67
Ushbp1Q8R370 Gm8296-201ENSMUST00000185597 524 ntBASIC4.61□□□□□ -1.67
Ushbp1Q8R370 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Ushbp1Q8R370 Gm37300-201ENSMUST00000193327 280 ntBASIC4.61□□□□□ -1.67
Ushbp1Q8R370 Gm44720-201ENSMUST00000206076 260 ntBASIC4.61□□□□□ -1.67
Ushbp1Q8R370 Gm45023-201ENSMUST00000207951 379 ntBASIC4.61□□□□□ -1.67
Ushbp1Q8R370 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Ushbp1Q8R370 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC4.61□□□□□ -1.67
Ushbp1Q8R370 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC4.61□□□□□ -1.67
Ushbp1Q8R370 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC4.61□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 96.8 ms