Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim47Q8C0E3 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Gm7853-201ENSMUST00000100708 478 ntBASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Gm11490-201ENSMUST00000118128 272 ntBASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Gm11790-201ENSMUST00000119569 455 ntBASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Mup-ps20-201ENSMUST00000121132 389 ntBASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Gm5123-201ENSMUST00000121905 837 ntBASIC5.58□□□□□ -1.52
Trim47Q8C0E3 n-R5s80-201ENSMUST00000122596 111 ntBASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Gm22026-201ENSMUST00000122735 281 ntBASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Gm5755-201ENSMUST00000152394 837 ntBASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Gm26153-201ENSMUST00000157433 127 ntBASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Gm24965-201ENSMUST00000157922 106 ntBASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Gm25486-201ENSMUST00000158726 63 ntBASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Gm8214-201ENSMUST00000172123 351 ntBASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Gm28769-201ENSMUST00000190176 615 ntBASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Gm19126-201ENSMUST00000207896 509 ntBASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Gm45367-201ENSMUST00000210171 347 ntBASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Gm45380-201ENSMUST00000210465 315 ntBASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Supt4b-201ENSMUST00000214434 351 ntBASIC5.58□□□□□ -1.52
Trim47Q8C0E3 AC099578.1-201ENSMUST00000220147 435 ntBASIC5.58□□□□□ -1.52
Trim47Q8C0E3 AC130821.1-201ENSMUST00000221997 293 ntBASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Gm19786-201ENSMUST00000222589 580 ntBASIC5.58□□□□□ -1.52
Trim47Q8C0E3 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.58□□□□□ -1.52
Trim47Q8C0E3 AC124729.1-201ENSMUST00000225327 976 ntBASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Gm25204-201ENSMUST00000082843 106 ntBASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim47Q8C0E3 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Trim47Q8C0E3 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.57□□□□□ -1.52
Trim47Q8C0E3 AC139218.1-201ENSMUST00000228215 4287 ntBASIC5.57□□□□□ -1.52
Trim47Q8C0E3 Gm37606-201ENSMUST00000191816 3116 ntBASIC5.57□□□□□ -1.52
Trim47Q8C0E3 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim47Q8C0E3 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim47Q8C0E3 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim47Q8C0E3 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Trim47Q8C0E3 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
Trim47Q8C0E3 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim47Q8C0E3 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.57□□□□□ -1.52
Trim47Q8C0E3 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim47Q8C0E3 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
Trim47Q8C0E3 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC5.57□□□□□ -1.52
Trim47Q8C0E3 Gm12156-201ENSMUST00000119188 554 ntBASIC5.57□□□□□ -1.52
Trim47Q8C0E3 Gm13213-201ENSMUST00000119668 474 ntBASIC5.57□□□□□ -1.52
Trim47Q8C0E3 Gm12779-201ENSMUST00000121496 143 ntBASIC5.57□□□□□ -1.52
Trim47Q8C0E3 Gm25966-201ENSMUST00000157169 117 ntBASIC5.57□□□□□ -1.52
Trim47Q8C0E3 Gm25624-201ENSMUST00000157222 275 ntBASIC5.57□□□□□ -1.52
Trim47Q8C0E3 Gm26149-201ENSMUST00000157432 108 ntBASIC5.57□□□□□ -1.52
Trim47Q8C0E3 Gm24348-201ENSMUST00000158710 130 ntBASIC5.57□□□□□ -1.52
Trim47Q8C0E3 Gm2962-201ENSMUST00000159266 336 ntBASIC5.57□□□□□ -1.52
Trim47Q8C0E3 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim47Q8C0E3 Gm5777-201ENSMUST00000177265 448 ntBASIC5.57□□□□□ -1.52
Trim47Q8C0E3 Gm19123-201ENSMUST00000190716 651 ntBASIC5.57□□□□□ -1.52
Trim47Q8C0E3 Gm20203-201ENSMUST00000192352 332 ntBASIC5.57□□□□□ -1.52
Trim47Q8C0E3 Trbv11-201ENSMUST00000194354 260 ntBASIC5.57□□□□□ -1.52
Trim47Q8C0E3 Gm37089-201ENSMUST00000195616 129 ntBASIC5.57□□□□□ -1.52
Trim47Q8C0E3 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC5.57□□□□□ -1.52
Trim47Q8C0E3 Gm44076-201ENSMUST00000203072 520 ntBASIC5.57□□□□□ -1.52
Trim47Q8C0E3 Gm44533-201ENSMUST00000207782 268 ntBASIC5.57□□□□□ -1.52
Trim47Q8C0E3 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC5.57□□□□□ -1.52
Trim47Q8C0E3 AC124772.1-201ENSMUST00000221325 151 ntBASIC5.57□□□□□ -1.52
Trim47Q8C0E3 AC125539.2-202ENSMUST00000227983 587 ntBASIC5.57□□□□□ -1.52
Trim47Q8C0E3 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Trim47Q8C0E3 Gm26204-201ENSMUST00000082906 107 ntBASIC5.57□□□□□ -1.52
Trim47Q8C0E3 Gm23138-201ENSMUST00000083365 103 ntBASIC5.57□□□□□ -1.52
Trim47Q8C0E3 Gm23041-201ENSMUST00000083868 106 ntBASIC5.57□□□□□ -1.52
Trim47Q8C0E3 Mir452-201ENSMUST00000093629 85 ntBASIC5.57□□□□□ -1.52
Trim47Q8C0E3 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
Trim47Q8C0E3 Gm38069-201ENSMUST00000195360 2144 ntBASIC5.57□□□□□ -1.52
Trim47Q8C0E3 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Trim47Q8C0E3 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim47Q8C0E3 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Trim47Q8C0E3 Gm5746-201ENSMUST00000183550 2200 ntBASIC5.56□□□□□ -1.52
Trim47Q8C0E3 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
Trim47Q8C0E3 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Trim47Q8C0E3 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.56□□□□□ -1.52
Trim47Q8C0E3 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim47Q8C0E3 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Trim47Q8C0E3 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Trim47Q8C0E3 Gm24423-201ENSMUST00000101982 106 ntBASIC5.56□□□□□ -1.52
Trim47Q8C0E3 Mir680-3-201ENSMUST00000102298 87 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms