Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Trim35Q8C006 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC6.42□□□□□ -1.38
Trim35Q8C006 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC6.42□□□□□ -1.38
Trim35Q8C006 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Trim35Q8C006 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.42□□□□□ -1.38
Trim35Q8C006 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Trim35Q8C006 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Trim35Q8C006 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Trim35Q8C006 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Trim35Q8C006 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trim35Q8C006 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC6.41□□□□□ -1.38
Trim35Q8C006 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trim35Q8C006 Gm45297-201ENSMUST00000209893 3483 ntBASIC6.41□□□□□ -1.38
Trim35Q8C006 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trim35Q8C006 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trim35Q8C006 Xpo7-203ENSMUST00000226448 3663 ntBASIC6.41□□□□□ -1.38
Trim35Q8C006 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trim35Q8C006 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC6.41□□□□□ -1.38
Trim35Q8C006 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trim35Q8C006 Gm26422-201ENSMUST00000104276 132 ntBASIC6.41□□□□□ -1.38
Trim35Q8C006 Gm24888-201ENSMUST00000104387 130 ntBASIC6.41□□□□□ -1.38
Trim35Q8C006 Gm14733-201ENSMUST00000117680 133 ntBASIC6.41□□□□□ -1.38
Trim35Q8C006 Gm15621-201ENSMUST00000119162 364 ntBASIC6.41□□□□□ -1.38
Trim35Q8C006 Gm12890-201ENSMUST00000120885 373 ntBASIC6.41□□□□□ -1.38
Trim35Q8C006 Gm12071-201ENSMUST00000121968 469 ntBASIC6.41□□□□□ -1.38
Trim35Q8C006 Gm25269-201ENSMUST00000122601 104 ntBASIC6.41□□□□□ -1.38
Trim35Q8C006 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trim35Q8C006 Gm24441-201ENSMUST00000157235 281 ntBASIC6.41□□□□□ -1.38
Trim35Q8C006 Gm23513-201ENSMUST00000158181 133 ntBASIC6.41□□□□□ -1.38
Trim35Q8C006 Gm27960-201ENSMUST00000183445 184 ntBASIC6.41□□□□□ -1.38
Trim35Q8C006 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC6.41□□□□□ -1.38
Trim35Q8C006 Gm18447-201ENSMUST00000187501 307 ntBASIC6.41□□□□□ -1.38
Trim35Q8C006 Gm28830-201ENSMUST00000188192 213 ntBASIC6.41□□□□□ -1.38
Trim35Q8C006 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC6.41□□□□□ -1.38
Trim35Q8C006 Gm40810-201ENSMUST00000219149 253 ntBASIC6.41□□□□□ -1.38
Trim35Q8C006 AC123618.1-201ENSMUST00000220174 360 ntBASIC6.41□□□□□ -1.38
Trim35Q8C006 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC6.41□□□□□ -1.38
Trim35Q8C006 Gm18441-201ENSMUST00000223539 617 ntBASIC6.41□□□□□ -1.38
Trim35Q8C006 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Trim35Q8C006 AC168062.1-201ENSMUST00000228048 769 ntBASIC6.41□□□□□ -1.38
Trim35Q8C006 Mir138-1-201ENSMUST00000083480 99 ntBASIC6.41□□□□□ -1.38
Trim35Q8C006 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Trim35Q8C006 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trim35Q8C006 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trim35Q8C006 Gm45493-201ENSMUST00000209494 3948 ntBASIC6.41□□□□□ -1.38
Trim35Q8C006 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trim35Q8C006 Gm20789-201ENSMUST00000221002 4195 ntBASIC6.41□□□□□ -1.38
Trim35Q8C006 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC6.41□□□□□ -1.38
Trim35Q8C006 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trim35Q8C006 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
Trim35Q8C006 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Trim35Q8C006 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Trim35Q8C006 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
Trim35Q8C006 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Trim35Q8C006 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trim35Q8C006 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Trim35Q8C006 Gm9157-201ENSMUST00000117673 225 ntBASIC6.4□□□□□ -1.38
Trim35Q8C006 Gm11448-201ENSMUST00000120427 450 ntBASIC6.4□□□□□ -1.38
Trim35Q8C006 Gm17014-201ENSMUST00000120765 168 ntBASIC6.4□□□□□ -1.38
Trim35Q8C006 Gm13669-201ENSMUST00000122366 457 ntBASIC6.4□□□□□ -1.38
Trim35Q8C006 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Trim35Q8C006 Gm17161-201ENSMUST00000169187 524 ntBASIC6.4□□□□□ -1.38
Trim35Q8C006 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC6.4□□□□□ -1.38
Trim35Q8C006 Gm18618-201ENSMUST00000222211 473 ntBASIC6.4□□□□□ -1.38
Trim35Q8C006 CT033785.1-201ENSMUST00000224872 272 ntBASIC6.4□□□□□ -1.38
Trim35Q8C006 mt-Ta-201ENSMUST00000082398 69 ntBASIC6.4□□□□□ -1.38
Trim35Q8C006 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Trim35Q8C006 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
Trim35Q8C006 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
Trim35Q8C006 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
Trim35Q8C006 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Trim35Q8C006 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Trim35Q8C006 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Trim35Q8C006 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Trim35Q8C006 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC6.4□□□□□ -1.39
Trim35Q8C006 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Trim35Q8C006 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC6.4□□□□□ -1.39
Trim35Q8C006 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
Trim35Q8C006 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
Trim35Q8C006 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Trim35Q8C006 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC6.4□□□□□ -1.39
Trim35Q8C006 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Trim35Q8C006 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Trim35Q8C006 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim35Q8C006 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Trim35Q8C006 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Trim35Q8C006 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC6.39□□□□□ -1.39
Trim35Q8C006 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
Trim35Q8C006 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim35Q8C006 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim35Q8C006 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Trim35Q8C006 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim35Q8C006 Gm26079-201ENSMUST00000104066 133 ntBASIC6.39□□□□□ -1.39
Trim35Q8C006 Gm14560-201ENSMUST00000118672 375 ntBASIC6.39□□□□□ -1.39
Trim35Q8C006 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC6.39□□□□□ -1.39
Trim35Q8C006 Gm26023-201ENSMUST00000122722 313 ntBASIC6.39□□□□□ -1.39
Trim35Q8C006 Gm25660-201ENSMUST00000158470 104 ntBASIC6.39□□□□□ -1.39
Trim35Q8C006 Gm25904-201ENSMUST00000158491 143 ntBASIC6.39□□□□□ -1.39
Trim35Q8C006 Gm9687-201ENSMUST00000189312 602 ntBASIC6.39□□□□□ -1.39
Trim35Q8C006 Gm44352-201ENSMUST00000196358 110 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms