Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Gm21379-201ENSMUST00000179772 1955 ntBASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 Gm13614-201ENSMUST00000117306 503 ntBASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 Gm15087-201ENSMUST00000117465 1172 ntBASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 Gm11718-201ENSMUST00000119942 537 ntBASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 Gm16428-201ENSMUST00000121193 723 ntBASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 Gm22199-201ENSMUST00000122660 126 ntBASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 Gm25559-201ENSMUST00000157182 74 ntBASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 Gm25427-201ENSMUST00000157605 103 ntBASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 Gm25386-201ENSMUST00000157814 288 ntBASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 Gm22166-201ENSMUST00000178419 121 ntBASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 Gm23288-201ENSMUST00000179213 121 ntBASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 Gm27695-201ENSMUST00000184301 91 ntBASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 Gm27190-201ENSMUST00000184890 542 ntBASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 Zfp-ps-201ENSMUST00000185025 478 ntBASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 Gm19503-201ENSMUST00000187109 241 ntBASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 Gm43007-201ENSMUST00000197618 291 ntBASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 Gm5551-201ENSMUST00000199720 690 ntBASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 Gm44650-201ENSMUST00000206929 194 ntBASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 Gm45049-201ENSMUST00000207586 591 ntBASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 AL669916.5-201ENSMUST00000214874 361 ntBASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 Gm18703-201ENSMUST00000215318 333 ntBASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 Gm3442-201ENSMUST00000216808 710 ntBASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 AC119573.1-201ENSMUST00000227960 757 ntBASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 CT030238.4-201ENSMUST00000228579 801 ntBASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 Gm10038-201ENSMUST00000077233 441 ntBASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 Gm26206-201ENSMUST00000082908 110 ntBASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
Trerf1Q8BXJ2 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
Trerf1Q8BXJ2 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Trerf1Q8BXJ2 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Trerf1Q8BXJ2 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Trerf1Q8BXJ2 Gm12739-201ENSMUST00000119769 382 ntBASIC4.21□□□□□ -1.74
Trerf1Q8BXJ2 Gm23981-201ENSMUST00000157136 106 ntBASIC4.21□□□□□ -1.74
Trerf1Q8BXJ2 Gm23538-201ENSMUST00000157535 101 ntBASIC4.21□□□□□ -1.74
Trerf1Q8BXJ2 Gm15946-201ENSMUST00000160654 423 ntBASIC4.21□□□□□ -1.74
Trerf1Q8BXJ2 Gm20612-201ENSMUST00000176318 236 ntBASIC4.21□□□□□ -1.74
Trerf1Q8BXJ2 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Trerf1Q8BXJ2 Gm26092-201ENSMUST00000179798 97 ntBASIC4.21□□□□□ -1.74
Trerf1Q8BXJ2 Mir669a-1-201ENSMUST00000180238 97 ntBASIC4.21□□□□□ -1.74
Trerf1Q8BXJ2 Gm27957-201ENSMUST00000184054 127 ntBASIC4.21□□□□□ -1.74
Trerf1Q8BXJ2 Gm28740-201ENSMUST00000186142 215 ntBASIC4.21□□□□□ -1.74
Trerf1Q8BXJ2 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC4.21□□□□□ -1.74
Trerf1Q8BXJ2 Gm43814-201ENSMUST00000197851 413 ntBASIC4.21□□□□□ -1.74
Trerf1Q8BXJ2 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC4.21□□□□□ -1.74
Trerf1Q8BXJ2 Gm8125-201ENSMUST00000216602 738 ntBASIC4.21□□□□□ -1.74
Trerf1Q8BXJ2 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC4.21□□□□□ -1.74
Trerf1Q8BXJ2 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC4.21□□□□□ -1.74
Trerf1Q8BXJ2 AC152946.2-201ENSMUST00000219071 337 ntBASIC4.21□□□□□ -1.74
Trerf1Q8BXJ2 Gm18113-201ENSMUST00000220630 303 ntBASIC4.21□□□□□ -1.74
Trerf1Q8BXJ2 AC116589.1-201ENSMUST00000220634 327 ntBASIC4.21□□□□□ -1.74
Trerf1Q8BXJ2 Gm7753-201ENSMUST00000221007 867 ntBASIC4.21□□□□□ -1.74
Trerf1Q8BXJ2 AC159619.2-201ENSMUST00000222924 401 ntBASIC4.21□□□□□ -1.74
Trerf1Q8BXJ2 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.21□□□□□ -1.74
Trerf1Q8BXJ2 Gm18441-201ENSMUST00000223539 617 ntBASIC4.21□□□□□ -1.74
Trerf1Q8BXJ2 AC122448.1-201ENSMUST00000226317 772 ntBASIC4.21□□□□□ -1.74
Trerf1Q8BXJ2 AC144819.1-201ENSMUST00000227015 620 ntBASIC4.21□□□□□ -1.74
Trerf1Q8BXJ2 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Trerf1Q8BXJ2 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Trerf1Q8BXJ2 Gm7381-201ENSMUST00000098958 300 ntBASIC4.21□□□□□ -1.74
Trerf1Q8BXJ2 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
Trerf1Q8BXJ2 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Trerf1Q8BXJ2 CT009510.2-203ENSMUST00000226704 2136 ntBASIC4.21□□□□□ -1.74
Trerf1Q8BXJ2 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Trerf1Q8BXJ2 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Trerf1Q8BXJ2 Gm25088-201ENSMUST00000101803 79 ntBASIC4.2□□□□□ -1.74
Trerf1Q8BXJ2 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC4.2□□□□□ -1.74
Trerf1Q8BXJ2 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC4.2□□□□□ -1.74
Trerf1Q8BXJ2 Gm14292-201ENSMUST00000118761 456 ntBASIC4.2□□□□□ -1.74
Trerf1Q8BXJ2 Gm11625-201ENSMUST00000119535 296 ntBASIC4.2□□□□□ -1.74
Trerf1Q8BXJ2 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC4.2□□□□□ -1.74
Trerf1Q8BXJ2 Gm23591-201ENSMUST00000157663 286 ntBASIC4.2□□□□□ -1.74
Trerf1Q8BXJ2 Gm25365-201ENSMUST00000158852 121 ntBASIC4.2□□□□□ -1.74
Trerf1Q8BXJ2 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Trerf1Q8BXJ2 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Trerf1Q8BXJ2 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC4.2□□□□□ -1.74
Trerf1Q8BXJ2 Mir6541-201ENSMUST00000183649 110 ntBASIC4.2□□□□□ -1.74
Trerf1Q8BXJ2 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.2□□□□□ -1.74
Trerf1Q8BXJ2 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Trerf1Q8BXJ2 Gm8790-201ENSMUST00000194108 322 ntBASIC4.2□□□□□ -1.74
Trerf1Q8BXJ2 Gm36259-201ENSMUST00000197340 392 ntBASIC4.2□□□□□ -1.74
Trerf1Q8BXJ2 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC4.2□□□□□ -1.74
Trerf1Q8BXJ2 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Trerf1Q8BXJ2 Gm43505-201ENSMUST00000200579 139 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms