Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Trim28Q62318 Gm25727-201ENSMUST00000104522 131 ntBASIC4.92□□□□□ -1.62
Trim28Q62318 Gm3940-201ENSMUST00000105087 432 ntBASIC4.92□□□□□ -1.62
Trim28Q62318 Gm14897-201ENSMUST00000118213 207 ntBASIC4.92□□□□□ -1.62
Trim28Q62318 Gm12016-201ENSMUST00000119079 681 ntBASIC4.92□□□□□ -1.62
Trim28Q62318 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC4.92□□□□□ -1.62
Trim28Q62318 Gm14564-201ENSMUST00000122159 294 ntBASIC4.92□□□□□ -1.62
Trim28Q62318 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC4.92□□□□□ -1.62
Trim28Q62318 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC4.92□□□□□ -1.62
Trim28Q62318 Gm24675-201ENSMUST00000158757 259 ntBASIC4.92□□□□□ -1.62
Trim28Q62318 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC4.92□□□□□ -1.62
Trim28Q62318 Gm37617-201ENSMUST00000194309 159 ntBASIC4.92□□□□□ -1.62
Trim28Q62318 Trav5d-2-201ENSMUST00000196107 275 ntBASIC4.92□□□□□ -1.62
Trim28Q62318 Trav5n-2-201ENSMUST00000197136 275 ntBASIC4.92□□□□□ -1.62
Trim28Q62318 Igkv8-31-201ENSMUST00000200040 372 ntBASIC4.92□□□□□ -1.62
Trim28Q62318 Gm43368-201ENSMUST00000200638 409 ntBASIC4.92□□□□□ -1.62
Trim28Q62318 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC4.92□□□□□ -1.62
Trim28Q62318 AC152415.1-201ENSMUST00000213320 440 ntBASIC4.92□□□□□ -1.62
Trim28Q62318 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC4.92□□□□□ -1.62
Trim28Q62318 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Trim28Q62318 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.92□□□□□ -1.62
Trim28Q62318 AC138667.2-201ENSMUST00000224880 598 ntBASIC4.92□□□□□ -1.62
Trim28Q62318 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Trim28Q62318 Gm25205-201ENSMUST00000082841 103 ntBASIC4.92□□□□□ -1.62
Trim28Q62318 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Trim28Q62318 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Trim28Q62318 Gm7709-201ENSMUST00000199391 1858 ntBASIC4.92□□□□□ -1.62
Trim28Q62318 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Trim28Q62318 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Trim28Q62318 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC4.91□□□□□ -1.62
Trim28Q62318 Gm38260-201ENSMUST00000193573 3995 ntBASIC4.91□□□□□ -1.62
Trim28Q62318 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Trim28Q62318 Gm44288-201ENSMUST00000205061 2795 ntBASIC4.91□□□□□ -1.62
Trim28Q62318 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Trim28Q62318 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Trim28Q62318 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Trim28Q62318 Gm14816-201ENSMUST00000117174 294 ntBASIC4.91□□□□□ -1.62
Trim28Q62318 Gm15799-201ENSMUST00000120899 289 ntBASIC4.91□□□□□ -1.62
Trim28Q62318 Mup-ps20-201ENSMUST00000121132 389 ntBASIC4.91□□□□□ -1.62
Trim28Q62318 Gm14821-201ENSMUST00000121975 435 ntBASIC4.91□□□□□ -1.62
Trim28Q62318 Gm25806-201ENSMUST00000122782 122 ntBASIC4.91□□□□□ -1.62
Trim28Q62318 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Trim28Q62318 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Trim28Q62318 Gm27903-201ENSMUST00000175482 126 ntBASIC4.91□□□□□ -1.62
Trim28Q62318 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Trim28Q62318 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Trim28Q62318 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Trim28Q62318 Gm22621-201ENSMUST00000179678 74 ntBASIC4.91□□□□□ -1.62
Trim28Q62318 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Trim28Q62318 Gm19427-201ENSMUST00000183619 208 ntBASIC4.91□□□□□ -1.62
Trim28Q62318 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC4.91□□□□□ -1.62
Trim28Q62318 Gm43669-201ENSMUST00000198229 436 ntBASIC4.91□□□□□ -1.62
Trim28Q62318 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC4.91□□□□□ -1.62
Trim28Q62318 Gm2628-201ENSMUST00000218019 426 ntBASIC4.91□□□□□ -1.62
Trim28Q62318 AC100590.2-201ENSMUST00000219028 215 ntBASIC4.91□□□□□ -1.62
Trim28Q62318 Gm8681-201ENSMUST00000219115 618 ntBASIC4.91□□□□□ -1.62
Trim28Q62318 AL606472.1-201ENSMUST00000224628 275 ntBASIC4.91□□□□□ -1.62
Trim28Q62318 CT025536.1-201ENSMUST00000226744 844 ntBASIC4.91□□□□□ -1.62
Trim28Q62318 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC4.91□□□□□ -1.62
Trim28Q62318 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Trim28Q62318 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Trim28Q62318 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Trim28Q62318 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
Trim28Q62318 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Trim28Q62318 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.62
Trim28Q62318 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Trim28Q62318 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
Trim28Q62318 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Trim28Q62318 Gm11408-201ENSMUST00000117889 519 ntBASIC4.9□□□□□ -1.63
Trim28Q62318 Gm12458-201ENSMUST00000119387 495 ntBASIC4.9□□□□□ -1.63
Trim28Q62318 Gm12691-201ENSMUST00000120186 456 ntBASIC4.9□□□□□ -1.63
Trim28Q62318 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC4.9□□□□□ -1.63
Trim28Q62318 Gm11344-201ENSMUST00000122011 335 ntBASIC4.9□□□□□ -1.63
Trim28Q62318 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.9□□□□□ -1.63
Trim28Q62318 Mup-ps2-201ENSMUST00000142602 533 ntBASIC4.9□□□□□ -1.63
Trim28Q62318 Gm24965-201ENSMUST00000157922 106 ntBASIC4.9□□□□□ -1.63
Trim28Q62318 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Trim28Q62318 Mir3070b-201ENSMUST00000175205 89 ntBASIC4.9□□□□□ -1.63
Trim28Q62318 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC4.9□□□□□ -1.63
Trim28Q62318 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC4.9□□□□□ -1.63
Trim28Q62318 Gm27428-201ENSMUST00000184289 110 ntBASIC4.9□□□□□ -1.63
Trim28Q62318 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC4.9□□□□□ -1.63
Trim28Q62318 Gm44274-201ENSMUST00000203417 256 ntBASIC4.9□□□□□ -1.63
Trim28Q62318 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Trim28Q62318 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC4.9□□□□□ -1.63
Trim28Q62318 Gm45200-201ENSMUST00000207434 919 ntBASIC4.9□□□□□ -1.63
Trim28Q62318 Gm19140-201ENSMUST00000209790 421 ntBASIC4.9□□□□□ -1.63
Trim28Q62318 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC4.9□□□□□ -1.63
Trim28Q62318 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC4.9□□□□□ -1.63
Trim28Q62318 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC4.9□□□□□ -1.63
Trim28Q62318 AC116589.7-201ENSMUST00000221061 239 ntBASIC4.9□□□□□ -1.63
Trim28Q62318 AC164117.1-201ENSMUST00000221726 239 ntBASIC4.9□□□□□ -1.63
Trim28Q62318 AC133101.1-201ENSMUST00000226939 1199 ntBASIC4.9□□□□□ -1.63
Trim28Q62318 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Trim28Q62318 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Trim28Q62318 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Trim28Q62318 Mir101b-201ENSMUST00000083622 97 ntBASIC4.9□□□□□ -1.63
Trim28Q62318 Gm37777-201ENSMUST00000195546 3366 ntBASIC4.9□□□□□ -1.63
Trim28Q62318 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Trim28Q62318 Gm43662-201ENSMUST00000198310 2271 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 96.9 ms