Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC4.06□□□□□ -1.76
CtcfQ61164 Gm23577-201ENSMUST00000103950 110 ntBASIC4.06□□□□□ -1.76
CtcfQ61164 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC4.06□□□□□ -1.76
CtcfQ61164 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CtcfQ61164 Mir467h-201ENSMUST00000116759 121 ntBASIC4.06□□□□□ -1.76
CtcfQ61164 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC4.06□□□□□ -1.76
CtcfQ61164 Gm12486-201ENSMUST00000120887 541 ntBASIC4.06□□□□□ -1.76
CtcfQ61164 Gm11982-201ENSMUST00000121480 314 ntBASIC4.06□□□□□ -1.76
CtcfQ61164 Gm14411-201ENSMUST00000121798 914 ntBASIC4.06□□□□□ -1.76
CtcfQ61164 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CtcfQ61164 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC4.06□□□□□ -1.76
CtcfQ61164 Gm24060-201ENSMUST00000157494 95 ntBASIC4.06□□□□□ -1.76
CtcfQ61164 Gm23352-201ENSMUST00000158428 64 ntBASIC4.06□□□□□ -1.76
CtcfQ61164 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC4.06□□□□□ -1.76
CtcfQ61164 Gm20399-201ENSMUST00000174652 132 ntBASIC4.06□□□□□ -1.76
CtcfQ61164 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC4.06□□□□□ -1.76
CtcfQ61164 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC4.06□□□□□ -1.76
CtcfQ61164 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC4.06□□□□□ -1.76
CtcfQ61164 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC4.06□□□□□ -1.76
CtcfQ61164 Gm7909-201ENSMUST00000182688 614 ntBASIC4.06□□□□□ -1.76
CtcfQ61164 Gm27342-201ENSMUST00000183530 109 ntBASIC4.06□□□□□ -1.76
CtcfQ61164 Gm27535-201ENSMUST00000183814 157 ntBASIC4.06□□□□□ -1.76
CtcfQ61164 Gm27539-201ENSMUST00000184971 224 ntBASIC4.06□□□□□ -1.76
CtcfQ61164 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CtcfQ61164 Gm29045-201ENSMUST00000187278 698 ntBASIC4.06□□□□□ -1.76
CtcfQ61164 Gm20811-201ENSMUST00000190500 553 ntBASIC4.06□□□□□ -1.76
CtcfQ61164 Gm19774-201ENSMUST00000190667 114 ntBASIC4.06□□□□□ -1.76
CtcfQ61164 Gm42465-201ENSMUST00000197036 492 ntBASIC4.06□□□□□ -1.76
CtcfQ61164 Gm43814-201ENSMUST00000197851 413 ntBASIC4.06□□□□□ -1.76
CtcfQ61164 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CtcfQ61164 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC4.06□□□□□ -1.76
CtcfQ61164 Gm18194-201ENSMUST00000210455 481 ntBASIC4.06□□□□□ -1.76
CtcfQ61164 AC152951.1-201ENSMUST00000218907 266 ntBASIC4.06□□□□□ -1.76
CtcfQ61164 Gm8785-201ENSMUST00000220259 487 ntBASIC4.06□□□□□ -1.76
CtcfQ61164 AC134254.5-201ENSMUST00000223436 400 ntBASIC4.06□□□□□ -1.76
CtcfQ61164 Gm30155-201ENSMUST00000223458 339 ntBASIC4.06□□□□□ -1.76
CtcfQ61164 Gm23518-201ENSMUST00000082835 153 ntBASIC4.06□□□□□ -1.76
CtcfQ61164 Mir421-201ENSMUST00000083575 76 ntBASIC4.06□□□□□ -1.76
CtcfQ61164 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CtcfQ61164 Gm37064-201ENSMUST00000193851 2231 ntBASIC4.06□□□□□ -1.76
CtcfQ61164 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC4.06□□□□□ -1.76
CtcfQ61164 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CtcfQ61164 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CtcfQ61164 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CtcfQ61164 Gm37298-201ENSMUST00000193770 3868 ntBASIC4.05□□□□□ -1.76
CtcfQ61164 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CtcfQ61164 Gm12102-201ENSMUST00000118251 604 ntBASIC4.05□□□□□ -1.76
CtcfQ61164 Gm11869-201ENSMUST00000118701 329 ntBASIC4.05□□□□□ -1.76
CtcfQ61164 Gm14517-201ENSMUST00000119040 337 ntBASIC4.05□□□□□ -1.76
CtcfQ61164 Gm11429-201ENSMUST00000119089 144 ntBASIC4.05□□□□□ -1.76
CtcfQ61164 Gm15263-201ENSMUST00000121556 642 ntBASIC4.05□□□□□ -1.76
CtcfQ61164 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC4.05□□□□□ -1.76
CtcfQ61164 Gm26173-201ENSMUST00000158416 136 ntBASIC4.05□□□□□ -1.76
CtcfQ61164 Gm22531-201ENSMUST00000158819 140 ntBASIC4.05□□□□□ -1.76
CtcfQ61164 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CtcfQ61164 Mir5710-201ENSMUST00000176884 69 ntBASIC4.05□□□□□ -1.76
CtcfQ61164 Gm23860-201ENSMUST00000179446 132 ntBASIC4.05□□□□□ -1.76
CtcfQ61164 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CtcfQ61164 Gm7870-201ENSMUST00000184467 616 ntBASIC4.05□□□□□ -1.76
CtcfQ61164 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC4.05□□□□□ -1.76
CtcfQ61164 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CtcfQ61164 Gm29196-201ENSMUST00000189239 618 ntBASIC4.05□□□□□ -1.76
CtcfQ61164 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CtcfQ61164 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC4.05□□□□□ -1.76
CtcfQ61164 Gm44343-201ENSMUST00000196702 90 ntBASIC4.05□□□□□ -1.76
CtcfQ61164 Gm43070-201ENSMUST00000196938 415 ntBASIC4.05□□□□□ -1.76
CtcfQ61164 Gm31230-201ENSMUST00000199725 785 ntBASIC4.05□□□□□ -1.76
CtcfQ61164 Gm43407-201ENSMUST00000199816 317 ntBASIC4.05□□□□□ -1.76
CtcfQ61164 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC4.05□□□□□ -1.76
CtcfQ61164 Gm44254-201ENSMUST00000204184 322 ntBASIC4.05□□□□□ -1.76
CtcfQ61164 Gm45553-201ENSMUST00000209929 507 ntBASIC4.05□□□□□ -1.76
CtcfQ61164 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC4.05□□□□□ -1.76
CtcfQ61164 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC4.05□□□□□ -1.76
CtcfQ61164 Gm46194-201ENSMUST00000218136 320 ntBASIC4.05□□□□□ -1.76
CtcfQ61164 Gm18774-201ENSMUST00000218269 601 ntBASIC4.05□□□□□ -1.76
CtcfQ61164 AC100590.2-201ENSMUST00000219028 215 ntBASIC4.05□□□□□ -1.76
CtcfQ61164 AC123618.1-201ENSMUST00000220174 360 ntBASIC4.05□□□□□ -1.76
CtcfQ61164 Gm46312-201ENSMUST00000220961 420 ntBASIC4.05□□□□□ -1.76
CtcfQ61164 CT573085.1-201ENSMUST00000224279 1197 ntBASIC4.05□□□□□ -1.76
CtcfQ61164 AC144798.1-201ENSMUST00000228120 391 ntBASIC4.05□□□□□ -1.76
CtcfQ61164 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CtcfQ61164 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CtcfQ61164 mt-Tr-201ENSMUST00000082412 68 ntBASIC4.05□□□□□ -1.76
CtcfQ61164 Gm24623-201ENSMUST00000082616 194 ntBASIC4.05□□□□□ -1.76
CtcfQ61164 n-R5s50-201ENSMUST00000083168 111 ntBASIC4.05□□□□□ -1.76
CtcfQ61164 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CtcfQ61164 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CtcfQ61164 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CtcfQ61164 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CtcfQ61164 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CtcfQ61164 Gm26384-201ENSMUST00000102183 110 ntBASIC4.04□□□□□ -1.76
CtcfQ61164 Mir667-201ENSMUST00000102441 92 ntBASIC4.04□□□□□ -1.76
CtcfQ61164 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CtcfQ61164 Gm42606-201ENSMUST00000114209 239 ntBASIC4.04□□□□□ -1.76
CtcfQ61164 Gm12509-201ENSMUST00000118033 609 ntBASIC4.04□□□□□ -1.76
CtcfQ61164 Gm14293-201ENSMUST00000118528 577 ntBASIC4.04□□□□□ -1.76
CtcfQ61164 Gm15312-201ENSMUST00000118827 271 ntBASIC4.04□□□□□ -1.76
CtcfQ61164 Gm15309-201ENSMUST00000121644 240 ntBASIC4.04□□□□□ -1.76
CtcfQ61164 Gm23167-201ENSMUST00000157155 103 ntBASIC4.04□□□□□ -1.76
CtcfQ61164 Gm22836-201ENSMUST00000158441 61 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms