Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC2.43□□□□□ -2.02
Trav2Q5R1I9 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC2.43□□□□□ -2.02
Trav2Q5R1I9 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.43□□□□□ -2.02
Trav2Q5R1I9 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trav2Q5R1I9 AC137842.3-201ENSMUST00000228855 2397 ntBASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Gm6207-201ENSMUST00000120075 1386 ntBASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Gm6228-201ENSMUST00000178856 1386 ntBASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Gm23577-201ENSMUST00000103950 110 ntBASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Gm23747-201ENSMUST00000104228 131 ntBASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Gm15161-201ENSMUST00000117340 387 ntBASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Gm11429-201ENSMUST00000119089 144 ntBASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Gm14877-201ENSMUST00000119803 478 ntBASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Gm12095-201ENSMUST00000121962 816 ntBASIC2.42□□□□□ -2.02
Trav2Q5R1I9 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Gm23668-201ENSMUST00000157465 111 ntBASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Gm25883-201ENSMUST00000157781 271 ntBASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Gm25373-201ENSMUST00000158156 115 ntBASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Gm23380-201ENSMUST00000158448 103 ntBASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Mir8103-201ENSMUST00000183945 107 ntBASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Gm18727-201ENSMUST00000185981 553 ntBASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Gm28623-201ENSMUST00000187219 192 ntBASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Igkv9-128-201ENSMUST00000196602 353 ntBASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Gm43368-201ENSMUST00000200638 409 ntBASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Gm7946-201ENSMUST00000203326 958 ntBASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Gm43991-201ENSMUST00000203751 274 ntBASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Gm44061-201ENSMUST00000203962 1195 ntBASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Gm44232-201ENSMUST00000204537 225 ntBASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Gm45247-201ENSMUST00000210757 309 ntBASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Gm17917-201ENSMUST00000218561 953 ntBASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC2.42□□□□□ -2.02
Trav2Q5R1I9 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Trav2Q5R1I9 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Trav2Q5R1I9 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
Trav2Q5R1I9 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Trav2Q5R1I9 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Trav2Q5R1I9 Gm22072-201ENSMUST00000116850 121 ntBASIC2.41□□□□□ -2.02
Trav2Q5R1I9 Gm12268-201ENSMUST00000118398 442 ntBASIC2.41□□□□□ -2.02
Trav2Q5R1I9 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Trav2Q5R1I9 Atp2b4-208ENSMUST00000167348 243 ntBASIC2.41□□□□□ -2.02
Trav2Q5R1I9 Gm18520-201ENSMUST00000174783 658 ntBASIC2.41□□□□□ -2.02
Trav2Q5R1I9 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC2.41□□□□□ -2.02
Trav2Q5R1I9 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Trav2Q5R1I9 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Trav2Q5R1I9 Gm25412-201ENSMUST00000180258 107 ntBASIC2.41□□□□□ -2.02
Trav2Q5R1I9 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC2.41□□□□□ -2.02
Trav2Q5R1I9 Mir7k-201ENSMUST00000184115 110 ntBASIC2.41□□□□□ -2.02
Trav2Q5R1I9 Gm28113-201ENSMUST00000188280 229 ntBASIC2.41□□□□□ -2.02
Trav2Q5R1I9 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Trav2Q5R1I9 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Trav2Q5R1I9 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC2.41□□□□□ -2.02
Trav2Q5R1I9 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC2.41□□□□□ -2.02
Trav2Q5R1I9 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC2.41□□□□□ -2.02
Trav2Q5R1I9 Gm6991-201ENSMUST00000218475 1178 ntBASIC2.41□□□□□ -2.02
Trav2Q5R1I9 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Trav2Q5R1I9 Gm19540-201ENSMUST00000221843 810 ntBASIC2.41□□□□□ -2.02
Trav2Q5R1I9 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC2.41□□□□□ -2.02
Trav2Q5R1I9 AC154730.1-201ENSMUST00000227874 816 ntBASIC2.41□□□□□ -2.02
Trav2Q5R1I9 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Trav2Q5R1I9 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Trav2Q5R1I9 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Trav2Q5R1I9 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Trav2Q5R1I9 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
Trav2Q5R1I9 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
Trav2Q5R1I9 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Trav2Q5R1I9 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Trav2Q5R1I9 Gm22658-201ENSMUST00000104196 155 ntBASIC2.4□□□□□ -2.03
Trav2Q5R1I9 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
Trav2Q5R1I9 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Trav2Q5R1I9 Gm15488-201ENSMUST00000121682 670 ntBASIC2.4□□□□□ -2.03
Trav2Q5R1I9 Gm11229-201ENSMUST00000121993 437 ntBASIC2.4□□□□□ -2.03
Trav2Q5R1I9 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC2.4□□□□□ -2.03
Trav2Q5R1I9 Gm9785-202ENSMUST00000144563 593 ntBASIC2.4□□□□□ -2.03
Trav2Q5R1I9 Gm24060-201ENSMUST00000157494 95 ntBASIC2.4□□□□□ -2.03
Trav2Q5R1I9 Nron-204ENSMUST00000158971 370 ntBASIC2.4□□□□□ -2.03
Trav2Q5R1I9 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Trav2Q5R1I9 Gm27999-201ENSMUST00000183539 193 ntBASIC2.4□□□□□ -2.03
Trav2Q5R1I9 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.4□□□□□ -2.03
Trav2Q5R1I9 Gm43954-201ENSMUST00000204634 544 ntBASIC2.4□□□□□ -2.03
Trav2Q5R1I9 Gm44520-201ENSMUST00000205447 802 ntBASIC2.4□□□□□ -2.03
Trav2Q5R1I9 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC2.4□□□□□ -2.03
Trav2Q5R1I9 AC167977.1-201ENSMUST00000221384 234 ntBASIC2.4□□□□□ -2.03
Trav2Q5R1I9 AC160958.1-201ENSMUST00000224833 368 ntBASIC2.4□□□□□ -2.03
Trav2Q5R1I9 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.4□□□□□ -2.03
Trav2Q5R1I9 AC129541.1-201ENSMUST00000226940 523 ntBASIC2.4□□□□□ -2.03
Trav2Q5R1I9 AC139294.2-201ENSMUST00000227159 285 ntBASIC2.4□□□□□ -2.03
Trav2Q5R1I9 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 118.9 ms