Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Ccdc88bQ4QRL3 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC3.73□□□□□ -1.81
Ccdc88bQ4QRL3 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Ccdc88bQ4QRL3 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc88bQ4QRL3 Gm45558-201ENSMUST00000209384 1895 ntBASIC3.72□□□□□ -1.81
Ccdc88bQ4QRL3 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ccdc88bQ4QRL3 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ccdc88bQ4QRL3 Gm23942-201ENSMUST00000101956 107 ntBASIC3.72□□□□□ -1.81
Ccdc88bQ4QRL3 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Ccdc88bQ4QRL3 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
Ccdc88bQ4QRL3 Gm14804-201ENSMUST00000122322 508 ntBASIC3.72□□□□□ -1.81
Ccdc88bQ4QRL3 Gm25488-201ENSMUST00000158728 118 ntBASIC3.72□□□□□ -1.81
Ccdc88bQ4QRL3 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Ccdc88bQ4QRL3 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC3.72□□□□□ -1.81
Ccdc88bQ4QRL3 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc88bQ4QRL3 Gm45078-201ENSMUST00000205343 546 ntBASIC3.72□□□□□ -1.81
Ccdc88bQ4QRL3 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC3.72□□□□□ -1.81
Ccdc88bQ4QRL3 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
Ccdc88bQ4QRL3 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC3.72□□□□□ -1.81
Ccdc88bQ4QRL3 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ccdc88bQ4QRL3 Gm45652-201ENSMUST00000210926 3831 ntBASIC3.71□□□□□ -1.81
Ccdc88bQ4QRL3 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Ccdc88bQ4QRL3 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
Ccdc88bQ4QRL3 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
Ccdc88bQ4QRL3 Trav20-201ENSMUST00000142754 347 ntBASIC3.71□□□□□ -1.82
Ccdc88bQ4QRL3 Mup-ps4-201ENSMUST00000151005 539 ntBASIC3.71□□□□□ -1.82
Ccdc88bQ4QRL3 Gm23223-201ENSMUST00000158119 127 ntBASIC3.71□□□□□ -1.82
Ccdc88bQ4QRL3 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC3.71□□□□□ -1.82
Ccdc88bQ4QRL3 AC122464.1-201ENSMUST00000202789 770 ntBASIC3.71□□□□□ -1.82
Ccdc88bQ4QRL3 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC3.71□□□□□ -1.82
Ccdc88bQ4QRL3 Gm5655-201ENSMUST00000221078 901 ntBASIC3.71□□□□□ -1.82
Ccdc88bQ4QRL3 AC126440.1-201ENSMUST00000227098 349 ntBASIC3.71□□□□□ -1.82
Ccdc88bQ4QRL3 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC3.71□□□□□ -1.82
Ccdc88bQ4QRL3 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Ccdc88bQ4QRL3 Gm15303-201ENSMUST00000118676 2624 ntBASIC3.71□□□□□ -1.82
Ccdc88bQ4QRL3 Gm14912-201ENSMUST00000120166 1773 ntBASIC3.71□□□□□ -1.82
Ccdc88bQ4QRL3 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Ccdc88bQ4QRL3 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Ccdc88bQ4QRL3 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Ccdc88bQ4QRL3 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC3.7□□□□□ -1.82
Ccdc88bQ4QRL3 Gm23043-201ENSMUST00000157890 109 ntBASIC3.7□□□□□ -1.82
Ccdc88bQ4QRL3 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Ccdc88bQ4QRL3 Gm37543-201ENSMUST00000192443 1031 ntBASIC3.7□□□□□ -1.82
Ccdc88bQ4QRL3 AC105407.3-201ENSMUST00000224161 648 ntBASIC3.7□□□□□ -1.82
Ccdc88bQ4QRL3 Gm6185-201ENSMUST00000193379 3553 ntBASIC3.7□□□□□ -1.82
Ccdc88bQ4QRL3 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Ccdc88bQ4QRL3 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Ccdc88bQ4QRL3 Gm9850-201ENSMUST00000117916 227 ntBASIC3.69□□□□□ -1.82
Ccdc88bQ4QRL3 Gm23885-201ENSMUST00000122682 294 ntBASIC3.69□□□□□ -1.82
Ccdc88bQ4QRL3 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC3.69□□□□□ -1.82
Ccdc88bQ4QRL3 Gm24010-201ENSMUST00000157731 282 ntBASIC3.69□□□□□ -1.82
Ccdc88bQ4QRL3 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Ccdc88bQ4QRL3 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC3.69□□□□□ -1.82
Ccdc88bQ4QRL3 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC3.69□□□□□ -1.82
Ccdc88bQ4QRL3 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC3.69□□□□□ -1.82
Ccdc88bQ4QRL3 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC3.69□□□□□ -1.82
Ccdc88bQ4QRL3 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Ccdc88bQ4QRL3 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.69□□□□□ -1.82
Ccdc88bQ4QRL3 BC022960-201ENSMUST00000119987 1815 ntBASIC3.69□□□□□ -1.82
Ccdc88bQ4QRL3 Gm14794-201ENSMUST00000118181 192 ntBASIC3.68□□□□□ -1.82
Ccdc88bQ4QRL3 Gm14469-201ENSMUST00000118363 202 ntBASIC3.68□□□□□ -1.82
Ccdc88bQ4QRL3 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC3.68□□□□□ -1.82
Ccdc88bQ4QRL3 Gm27443-201ENSMUST00000184660 98 ntBASIC3.68□□□□□ -1.82
Ccdc88bQ4QRL3 Gm8249-201ENSMUST00000219225 465 ntBASIC3.68□□□□□ -1.82
Ccdc88bQ4QRL3 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
Ccdc88bQ4QRL3 Gm42659-201ENSMUST00000196955 1754 ntBASIC3.68□□□□□ -1.82
Ccdc88bQ4QRL3 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Ccdc88bQ4QRL3 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Ccdc88bQ4QRL3 Gm22713-201ENSMUST00000116895 130 ntBASIC3.67□□□□□ -1.82
Ccdc88bQ4QRL3 Gm15183-201ENSMUST00000118933 348 ntBASIC3.67□□□□□ -1.82
Ccdc88bQ4QRL3 Gm16561-201ENSMUST00000163001 192 ntBASIC3.67□□□□□ -1.82
Ccdc88bQ4QRL3 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ccdc88bQ4QRL3 Gm27535-201ENSMUST00000183814 157 ntBASIC3.67□□□□□ -1.82
Ccdc88bQ4QRL3 AC109172.2-201ENSMUST00000228792 381 ntBASIC3.67□□□□□ -1.82
Ccdc88bQ4QRL3 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ccdc88bQ4QRL3 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Ccdc88bQ4QRL3 Gm43663-201ENSMUST00000198643 1505 ntBASIC3.67□□□□□ -1.82
Ccdc88bQ4QRL3 Gm6207-201ENSMUST00000120075 1386 ntBASIC3.67□□□□□ -1.82
Ccdc88bQ4QRL3 Gm6228-201ENSMUST00000178856 1386 ntBASIC3.67□□□□□ -1.82
Ccdc88bQ4QRL3 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Ccdc88bQ4QRL3 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC3.67□□□□□ -1.82
Ccdc88bQ4QRL3 Gm12607-201ENSMUST00000120724 493 ntBASIC3.67□□□□□ -1.82
Ccdc88bQ4QRL3 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC3.67□□□□□ -1.82
Ccdc88bQ4QRL3 Gm25460-201ENSMUST00000157954 127 ntBASIC3.67□□□□□ -1.82
Ccdc88bQ4QRL3 Gm43967-201ENSMUST00000203787 301 ntBASIC3.67□□□□□ -1.82
Ccdc88bQ4QRL3 AC155715.1-201ENSMUST00000213575 463 ntBASIC3.67□□□□□ -1.82
Ccdc88bQ4QRL3 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Ccdc88bQ4QRL3 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Ccdc88bQ4QRL3 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc88bQ4QRL3 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.66□□□□□ -1.82
Ccdc88bQ4QRL3 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Ccdc88bQ4QRL3 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Ccdc88bQ4QRL3 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.66□□□□□ -1.82
Ccdc88bQ4QRL3 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Ccdc88bQ4QRL3 Gm43373-201ENSMUST00000202552 2870 ntBASIC3.66□□□□□ -1.82
Ccdc88bQ4QRL3 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC3.66□□□□□ -1.82
Ccdc88bQ4QRL3 Gm13024-201ENSMUST00000121756 718 ntBASIC3.66□□□□□ -1.82
Ccdc88bQ4QRL3 Gm13471-201ENSMUST00000122057 433 ntBASIC3.66□□□□□ -1.82
Ccdc88bQ4QRL3 Gm24076-201ENSMUST00000158179 94 ntBASIC3.66□□□□□ -1.82
Ccdc88bQ4QRL3 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms