Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Gm25451-201ENSMUST00000177832 121 ntBASIC3.2□□□□□ -1.9
Ssbp4Q3U4B1 Spin2g-201ENSMUST00000178425 687 ntBASIC3.2□□□□□ -1.9
Ssbp4Q3U4B1 Gm24897-201ENSMUST00000179033 107 ntBASIC3.2□□□□□ -1.9
Ssbp4Q3U4B1 Gm27189-201ENSMUST00000184119 190 ntBASIC3.2□□□□□ -1.9
Ssbp4Q3U4B1 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC3.2□□□□□ -1.9
Ssbp4Q3U4B1 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.2□□□□□ -1.9
Ssbp4Q3U4B1 Gm43114-201ENSMUST00000198298 343 ntBASIC3.2□□□□□ -1.9
Ssbp4Q3U4B1 Gm43214-201ENSMUST00000199242 352 ntBASIC3.2□□□□□ -1.9
Ssbp4Q3U4B1 Gm19457-201ENSMUST00000200995 448 ntBASIC3.2□□□□□ -1.9
Ssbp4Q3U4B1 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC3.2□□□□□ -1.9
Ssbp4Q3U4B1 Gm44475-201ENSMUST00000204041 424 ntBASIC3.2□□□□□ -1.9
Ssbp4Q3U4B1 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC3.2□□□□□ -1.9
Ssbp4Q3U4B1 AC069561.2-201ENSMUST00000217596 420 ntBASIC3.2□□□□□ -1.9
Ssbp4Q3U4B1 Gm18774-201ENSMUST00000218269 601 ntBASIC3.2□□□□□ -1.9
Ssbp4Q3U4B1 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC3.2□□□□□ -1.9
Ssbp4Q3U4B1 AC144628.1-201ENSMUST00000227943 466 ntBASIC3.2□□□□□ -1.9
Ssbp4Q3U4B1 AC117588.3-201ENSMUST00000228517 325 ntBASIC3.2□□□□□ -1.9
Ssbp4Q3U4B1 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
Ssbp4Q3U4B1 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Ssbp4Q3U4B1 Gm37983-201ENSMUST00000193207 2006 ntBASIC3.2□□□□□ -1.9
Ssbp4Q3U4B1 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Ssbp4Q3U4B1 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Ssbp4Q3U4B1 Gm18913-201ENSMUST00000204311 1789 ntBASIC3.2□□□□□ -1.9
Ssbp4Q3U4B1 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.2□□□□□ -1.9
Ssbp4Q3U4B1 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Ssbp4Q3U4B1 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Ssbp4Q3U4B1 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Gm23691-201ENSMUST00000101878 107 ntBASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Gm22472-201ENSMUST00000104115 134 ntBASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Gm23322-201ENSMUST00000104464 167 ntBASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Gm3940-201ENSMUST00000105087 432 ntBASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Gm24590-201ENSMUST00000116699 119 ntBASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Gm16431-201ENSMUST00000117454 431 ntBASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Gm14793-201ENSMUST00000118739 311 ntBASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Gm14835-201ENSMUST00000119039 315 ntBASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Gm11704-201ENSMUST00000120031 214 ntBASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Gm6591-201ENSMUST00000121063 434 ntBASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Gm14577-201ENSMUST00000121134 256 ntBASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Gm6058-201ENSMUST00000154261 399 ntBASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Gm22236-201ENSMUST00000157093 106 ntBASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Gm25559-201ENSMUST00000157182 74 ntBASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Gm23591-201ENSMUST00000157663 286 ntBASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Gm24014-201ENSMUST00000157728 157 ntBASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Gm5709-201ENSMUST00000177879 1165 ntBASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Gm23648-201ENSMUST00000180301 107 ntBASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Trbv8-201ENSMUST00000194020 285 ntBASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Gm37617-201ENSMUST00000194309 159 ntBASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Gm29754-201ENSMUST00000206269 358 ntBASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Gm45146-201ENSMUST00000207108 221 ntBASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 AC116589.1-201ENSMUST00000220634 327 ntBASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 AC154224.1-201ENSMUST00000224367 403 ntBASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 AC138718.1-201ENSMUST00000225947 1009 ntBASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 AC158981.3-202ENSMUST00000228906 523 ntBASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Gm23506-201ENSMUST00000083077 107 ntBASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Mir323-201ENSMUST00000083683 86 ntBASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Gm10242-201ENSMUST00000090064 330 ntBASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Gm43751-201ENSMUST00000200275 3071 ntBASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
Ssbp4Q3U4B1 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 Gm25727-201ENSMUST00000104522 131 ntBASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 Mir883a-201ENSMUST00000104824 76 ntBASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 Mir669d-2-201ENSMUST00000116854 86 ntBASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 Gm14975-201ENSMUST00000118741 664 ntBASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 Gm14607-201ENSMUST00000119119 491 ntBASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 Gm12458-201ENSMUST00000119387 495 ntBASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 Gm11829-201ENSMUST00000121003 282 ntBASIC3.18□□□□□ -1.9
Ssbp4Q3U4B1 Gm13511-201ENSMUST00000121167 363 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms