Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Gm5917-201ENSMUST00000217638 721 ntBASIC3.82□□□□□ -1.8
Col28a1Q2UY11 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Col28a1Q2UY11 Gm7753-201ENSMUST00000221007 867 ntBASIC3.82□□□□□ -1.8
Col28a1Q2UY11 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Col28a1Q2UY11 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Col28a1Q2UY11 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Col28a1Q2UY11 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Col28a1Q2UY11 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Col28a1Q2UY11 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC3.82□□□□□ -1.8
Col28a1Q2UY11 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Col28a1Q2UY11 Gm45093-201ENSMUST00000206859 2463 ntBASIC3.82□□□□□ -1.8
Col28a1Q2UY11 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Col28a1Q2UY11 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Col28a1Q2UY11 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC3.82□□□□□ -1.8
Col28a1Q2UY11 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
Col28a1Q2UY11 AC164297.6-201ENSMUST00000224643 1568 ntBASIC3.81□□□□□ -1.8
Col28a1Q2UY11 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col28a1Q2UY11 Gm13155-201ENSMUST00000119277 646 ntBASIC3.81□□□□□ -1.8
Col28a1Q2UY11 Gm8178-201ENSMUST00000121570 646 ntBASIC3.81□□□□□ -1.8
Col28a1Q2UY11 Gm9003-201ENSMUST00000121810 482 ntBASIC3.81□□□□□ -1.8
Col28a1Q2UY11 Gm9225-201ENSMUST00000121921 836 ntBASIC3.81□□□□□ -1.8
Col28a1Q2UY11 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC3.81□□□□□ -1.8
Col28a1Q2UY11 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC3.81□□□□□ -1.8
Col28a1Q2UY11 Gm23957-201ENSMUST00000157209 90 ntBASIC3.81□□□□□ -1.8
Col28a1Q2UY11 Gm26460-201ENSMUST00000175061 126 ntBASIC3.81□□□□□ -1.8
Col28a1Q2UY11 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC3.81□□□□□ -1.8
Col28a1Q2UY11 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC3.81□□□□□ -1.8
Col28a1Q2UY11 Gm28141-201ENSMUST00000186676 342 ntBASIC3.81□□□□□ -1.8
Col28a1Q2UY11 Scgb2b6-201ENSMUST00000188132 330 ntBASIC3.81□□□□□ -1.8
Col28a1Q2UY11 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC3.81□□□□□ -1.8
Col28a1Q2UY11 Gm44373-201ENSMUST00000196112 169 ntBASIC3.81□□□□□ -1.8
Col28a1Q2UY11 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC3.81□□□□□ -1.8
Col28a1Q2UY11 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC3.81□□□□□ -1.8
Col28a1Q2UY11 Gm44887-201ENSMUST00000208980 178 ntBASIC3.81□□□□□ -1.8
Col28a1Q2UY11 Gm45539-201ENSMUST00000210313 428 ntBASIC3.81□□□□□ -1.8
Col28a1Q2UY11 Gm45742-201ENSMUST00000212400 433 ntBASIC3.81□□□□□ -1.8
Col28a1Q2UY11 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC3.81□□□□□ -1.8
Col28a1Q2UY11 Gm45710-201ENSMUST00000212847 215 ntBASIC3.81□□□□□ -1.8
Col28a1Q2UY11 Gm46193-201ENSMUST00000219399 364 ntBASIC3.81□□□□□ -1.8
Col28a1Q2UY11 AC132954.1-201ENSMUST00000221017 342 ntBASIC3.81□□□□□ -1.8
Col28a1Q2UY11 AC174082.1-201ENSMUST00000221106 307 ntBASIC3.81□□□□□ -1.8
Col28a1Q2UY11 AC138718.1-201ENSMUST00000225947 1009 ntBASIC3.81□□□□□ -1.8
Col28a1Q2UY11 AC141884.1-201ENSMUST00000226327 636 ntBASIC3.81□□□□□ -1.8
Col28a1Q2UY11 AC113031.5-201ENSMUST00000227116 606 ntBASIC3.81□□□□□ -1.8
Col28a1Q2UY11 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Col28a1Q2UY11 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Col28a1Q2UY11 Gm24928-201ENSMUST00000083399 107 ntBASIC3.81□□□□□ -1.8
Col28a1Q2UY11 Gm23093-201ENSMUST00000083450 102 ntBASIC3.81□□□□□ -1.8
Col28a1Q2UY11 Mir181a-2-201ENSMUST00000083489 76 ntBASIC3.81□□□□□ -1.8
Col28a1Q2UY11 Gm25897-201ENSMUST00000083709 107 ntBASIC3.81□□□□□ -1.8
Col28a1Q2UY11 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col28a1Q2UY11 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.81□□□□□ -1.8
Col28a1Q2UY11 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Col28a1Q2UY11 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
Col28a1Q2UY11 Gm37143-201ENSMUST00000195180 3259 ntBASIC3.81□□□□□ -1.8
Col28a1Q2UY11 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Col28a1Q2UY11 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
Col28a1Q2UY11 Gm43886-201ENSMUST00000205039 2386 ntBASIC3.8□□□□□ -1.8
Col28a1Q2UY11 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Col28a1Q2UY11 Mir759-201ENSMUST00000103254 98 ntBASIC3.8□□□□□ -1.8
Col28a1Q2UY11 Gm15010-201ENSMUST00000117153 407 ntBASIC3.8□□□□□ -1.8
Col28a1Q2UY11 Gm14163-201ENSMUST00000117342 217 ntBASIC3.8□□□□□ -1.8
Col28a1Q2UY11 Gm12935-201ENSMUST00000119352 246 ntBASIC3.8□□□□□ -1.8
Col28a1Q2UY11 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC3.8□□□□□ -1.8
Col28a1Q2UY11 Gm22453-201ENSMUST00000122801 318 ntBASIC3.8□□□□□ -1.8
Col28a1Q2UY11 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Col28a1Q2UY11 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC3.8□□□□□ -1.8
Col28a1Q2UY11 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC3.8□□□□□ -1.8
Col28a1Q2UY11 Gm24847-201ENSMUST00000158032 108 ntBASIC3.8□□□□□ -1.8
Col28a1Q2UY11 Gm26352-201ENSMUST00000158223 125 ntBASIC3.8□□□□□ -1.8
Col28a1Q2UY11 Gm24503-201ENSMUST00000158454 135 ntBASIC3.8□□□□□ -1.8
Col28a1Q2UY11 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Col28a1Q2UY11 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC3.8□□□□□ -1.8
Col28a1Q2UY11 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC3.8□□□□□ -1.8
Col28a1Q2UY11 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC3.8□□□□□ -1.8
Col28a1Q2UY11 Gm29105-201ENSMUST00000187256 450 ntBASIC3.8□□□□□ -1.8
Col28a1Q2UY11 Gm29428-201ENSMUST00000190086 409 ntBASIC3.8□□□□□ -1.8
Col28a1Q2UY11 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Col28a1Q2UY11 Gm33354-201ENSMUST00000195448 906 ntBASIC3.8□□□□□ -1.8
Col28a1Q2UY11 Gm5551-201ENSMUST00000199720 690 ntBASIC3.8□□□□□ -1.8
Col28a1Q2UY11 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Col28a1Q2UY11 Gm44142-201ENSMUST00000203358 311 ntBASIC3.8□□□□□ -1.8
Col28a1Q2UY11 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC3.8□□□□□ -1.8
Col28a1Q2UY11 Gm44718-201ENSMUST00000206886 359 ntBASIC3.8□□□□□ -1.8
Col28a1Q2UY11 Gm45530-201ENSMUST00000211658 225 ntBASIC3.8□□□□□ -1.8
Col28a1Q2UY11 AC162931.1-201ENSMUST00000214184 267 ntBASIC3.8□□□□□ -1.8
Col28a1Q2UY11 CT030242.2-201ENSMUST00000221588 148 ntBASIC3.8□□□□□ -1.8
Col28a1Q2UY11 AC161758.1-201ENSMUST00000226123 310 ntBASIC3.8□□□□□ -1.8
Col28a1Q2UY11 AC102291.2-201ENSMUST00000228083 367 ntBASIC3.8□□□□□ -1.8
Col28a1Q2UY11 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Col28a1Q2UY11 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Col28a1Q2UY11 Snora31-201ENSMUST00000083213 130 ntBASIC3.8□□□□□ -1.8
Col28a1Q2UY11 Gm44708-201ENSMUST00000205580 2237 ntBASIC3.8□□□□□ -1.8
Col28a1Q2UY11 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Col28a1Q2UY11 AC122887.2-201ENSMUST00000219465 1603 ntBASIC3.8□□□□□ -1.8
Col28a1Q2UY11 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Col28a1Q2UY11 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Col28a1Q2UY11 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Col28a1Q2UY11 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Col28a1Q2UY11 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms