Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm26129-201ENSMUST00000082719 107 ntBASIC5.75□□□□□ -1.49
Col17a1Q07563 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Col17a1Q07563 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Col17a1Q07563 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col17a1Q07563 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col17a1Q07563 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Col17a1Q07563 Gm7739-201ENSMUST00000221131 1560 ntBASIC5.75□□□□□ -1.49
Col17a1Q07563 Zfp640-202ENSMUST00000224116 1562 ntBASIC5.75□□□□□ -1.49
Col17a1Q07563 Hm629797-201ENSMUST00000183645 2398 ntBASIC5.74□□□□□ -1.49
Col17a1Q07563 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col17a1Q07563 Gm43648-201ENSMUST00000197775 2485 ntBASIC5.74□□□□□ -1.49
Col17a1Q07563 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col17a1Q07563 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col17a1Q07563 Gm42534-201ENSMUST00000196063 1754 ntBASIC5.74□□□□□ -1.49
Col17a1Q07563 Gm42639-201ENSMUST00000197061 1871 ntBASIC5.74□□□□□ -1.49
Col17a1Q07563 Gm24592-201ENSMUST00000122505 106 ntBASIC5.74□□□□□ -1.49
Col17a1Q07563 Gm23791-201ENSMUST00000122553 293 ntBASIC5.74□□□□□ -1.49
Col17a1Q07563 Gm23885-201ENSMUST00000122682 294 ntBASIC5.74□□□□□ -1.49
Col17a1Q07563 Mir3075-201ENSMUST00000175340 85 ntBASIC5.74□□□□□ -1.49
Col17a1Q07563 Gm27783-201ENSMUST00000183534 105 ntBASIC5.74□□□□□ -1.49
Col17a1Q07563 Mir6398-201ENSMUST00000184541 102 ntBASIC5.74□□□□□ -1.49
Col17a1Q07563 Gm29460-201ENSMUST00000188607 714 ntBASIC5.74□□□□□ -1.49
Col17a1Q07563 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col17a1Q07563 Gm19418-201ENSMUST00000197436 580 ntBASIC5.74□□□□□ -1.49
Col17a1Q07563 Gm42666-201ENSMUST00000201954 152 ntBASIC5.74□□□□□ -1.49
Col17a1Q07563 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC5.74□□□□□ -1.49
Col17a1Q07563 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC5.74□□□□□ -1.49
Col17a1Q07563 AC153662.1-201ENSMUST00000222220 270 ntBASIC5.74□□□□□ -1.49
Col17a1Q07563 AC104832.1-201ENSMUST00000222938 550 ntBASIC5.74□□□□□ -1.49
Col17a1Q07563 AC173481.1-201ENSMUST00000223351 270 ntBASIC5.74□□□□□ -1.49
Col17a1Q07563 Gm18441-201ENSMUST00000223539 617 ntBASIC5.74□□□□□ -1.49
Col17a1Q07563 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col17a1Q07563 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col17a1Q07563 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col17a1Q07563 Gm43662-201ENSMUST00000198310 2271 ntBASIC5.74□□□□□ -1.49
Col17a1Q07563 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Col17a1Q07563 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col17a1Q07563 Gm37645-201ENSMUST00000194285 3556 ntBASIC5.73□□□□□ -1.49
Col17a1Q07563 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Col17a1Q07563 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
Col17a1Q07563 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.73□□□□□ -1.49
Col17a1Q07563 Gm26384-201ENSMUST00000102183 110 ntBASIC5.73□□□□□ -1.49
Col17a1Q07563 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col17a1Q07563 Gm6762-201ENSMUST00000121769 289 ntBASIC5.73□□□□□ -1.49
Col17a1Q07563 Gm11281-201ENSMUST00000141391 576 ntBASIC5.73□□□□□ -1.49
Col17a1Q07563 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC5.73□□□□□ -1.49
Col17a1Q07563 Gm24080-201ENSMUST00000175178 232 ntBASIC5.73□□□□□ -1.49
Col17a1Q07563 Gm26426-201ENSMUST00000177866 123 ntBASIC5.73□□□□□ -1.49
Col17a1Q07563 Gm26060-201ENSMUST00000180094 123 ntBASIC5.73□□□□□ -1.49
Col17a1Q07563 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC5.73□□□□□ -1.49
Col17a1Q07563 Gm27315-201ENSMUST00000183977 154 ntBASIC5.73□□□□□ -1.49
Col17a1Q07563 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC5.73□□□□□ -1.49
Col17a1Q07563 Gm17893-201ENSMUST00000203017 770 ntBASIC5.73□□□□□ -1.49
Col17a1Q07563 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC5.73□□□□□ -1.49
Col17a1Q07563 AC173115.1-201ENSMUST00000220835 211 ntBASIC5.73□□□□□ -1.49
Col17a1Q07563 AC116589.7-201ENSMUST00000221061 239 ntBASIC5.73□□□□□ -1.49
Col17a1Q07563 AC164117.1-201ENSMUST00000221726 239 ntBASIC5.73□□□□□ -1.49
Col17a1Q07563 AC122397.2-201ENSMUST00000227422 686 ntBASIC5.73□□□□□ -1.49
Col17a1Q07563 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col17a1Q07563 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col17a1Q07563 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
Col17a1Q07563 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
Col17a1Q07563 Gm44675-201ENSMUST00000208188 2927 ntBASIC5.73□□□□□ -1.49
Col17a1Q07563 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col17a1Q07563 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col17a1Q07563 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Col17a1Q07563 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col17a1Q07563 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col17a1Q07563 Gm2987-201ENSMUST00000187673 1693 ntBASIC5.72□□□□□ -1.49
Col17a1Q07563 Gm45066-201ENSMUST00000207528 2551 ntBASIC5.72□□□□□ -1.49
Col17a1Q07563 Gm12571-201ENSMUST00000118132 243 ntBASIC5.72□□□□□ -1.49
Col17a1Q07563 Gm14001-201ENSMUST00000118847 247 ntBASIC5.72□□□□□ -1.49
Col17a1Q07563 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC5.72□□□□□ -1.49
Col17a1Q07563 Gm12543-201ENSMUST00000120410 543 ntBASIC5.72□□□□□ -1.49
Col17a1Q07563 Gm13677-201ENSMUST00000120739 595 ntBASIC5.72□□□□□ -1.49
Col17a1Q07563 Gm15190-201ENSMUST00000120855 276 ntBASIC5.72□□□□□ -1.49
Col17a1Q07563 Gm14389-201ENSMUST00000140453 241 ntBASIC5.72□□□□□ -1.49
Col17a1Q07563 Gm16331-201ENSMUST00000144274 498 ntBASIC5.72□□□□□ -1.49
Col17a1Q07563 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col17a1Q07563 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC5.72□□□□□ -1.49
Col17a1Q07563 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col17a1Q07563 Gm44300-201ENSMUST00000196792 121 ntBASIC5.72□□□□□ -1.49
Col17a1Q07563 Gm19252-201ENSMUST00000204705 305 ntBASIC5.72□□□□□ -1.49
Col17a1Q07563 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC5.72□□□□□ -1.49
Col17a1Q07563 Gm18729-201ENSMUST00000217230 621 ntBASIC5.72□□□□□ -1.49
Col17a1Q07563 CT009711.3-201ENSMUST00000225882 250 ntBASIC5.72□□□□□ -1.49
Col17a1Q07563 Gm23614-201ENSMUST00000082598 107 ntBASIC5.72□□□□□ -1.49
Col17a1Q07563 Snord35b-201ENSMUST00000082833 87 ntBASIC5.72□□□□□ -1.49
Col17a1Q07563 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col17a1Q07563 Gm37096-201ENSMUST00000192317 2058 ntBASIC5.72□□□□□ -1.49
Col17a1Q07563 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC5.72□□□□□ -1.49
Col17a1Q07563 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Col17a1Q07563 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC5.72□□□□□ -1.49
Col17a1Q07563 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col17a1Q07563 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col17a1Q07563 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col17a1Q07563 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Col17a1Q07563 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col17a1Q07563 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Col17a1Q07563 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 101 ms