Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm45493-201ENSMUST00000209494 3948 ntBASIC5.61□□□□□ -1.51
Col9a1Q05722 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col9a1Q05722 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col9a1Q05722 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col9a1Q05722 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC5.61□□□□□ -1.51
Col9a1Q05722 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col9a1Q05722 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC5.61□□□□□ -1.51
Col9a1Q05722 Gm28874-201ENSMUST00000190917 3134 ntBASIC5.61□□□□□ -1.51
Col9a1Q05722 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col9a1Q05722 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Col9a1Q05722 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Col9a1Q05722 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Col9a1Q05722 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col9a1Q05722 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col9a1Q05722 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col9a1Q05722 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col9a1Q05722 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col9a1Q05722 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Col9a1Q05722 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
Col9a1Q05722 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col9a1Q05722 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col9a1Q05722 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col9a1Q05722 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC5.6□□□□□ -1.51
Col9a1Q05722 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col9a1Q05722 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col9a1Q05722 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col9a1Q05722 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col9a1Q05722 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col9a1Q05722 Gm11367-201ENSMUST00000117802 120 ntBASIC5.6□□□□□ -1.51
Col9a1Q05722 Gm15357-201ENSMUST00000119160 285 ntBASIC5.6□□□□□ -1.51
Col9a1Q05722 Gm14688-201ENSMUST00000119169 303 ntBASIC5.6□□□□□ -1.51
Col9a1Q05722 Gm24839-201ENSMUST00000122602 107 ntBASIC5.6□□□□□ -1.51
Col9a1Q05722 Gm25430-201ENSMUST00000157614 289 ntBASIC5.6□□□□□ -1.51
Col9a1Q05722 Gm24188-201ENSMUST00000157980 108 ntBASIC5.6□□□□□ -1.51
Col9a1Q05722 Gm27761-201ENSMUST00000184091 131 ntBASIC5.6□□□□□ -1.51
Col9a1Q05722 Gm42647-201ENSMUST00000195939 459 ntBASIC5.6□□□□□ -1.51
Col9a1Q05722 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC5.6□□□□□ -1.51
Col9a1Q05722 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.6□□□□□ -1.51
Col9a1Q05722 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Col9a1Q05722 Gm37101-201ENSMUST00000191656 3660 ntBASIC5.6□□□□□ -1.51
Col9a1Q05722 Gm38073-201ENSMUST00000195141 3665 ntBASIC5.6□□□□□ -1.51
Col9a1Q05722 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Col9a1Q05722 Gm19368-201ENSMUST00000221258 4424 ntBASIC5.6□□□□□ -1.51
Col9a1Q05722 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col9a1Q05722 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Col9a1Q05722 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Col9a1Q05722 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col9a1Q05722 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Col9a1Q05722 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Col9a1Q05722 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col9a1Q05722 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col9a1Q05722 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Col9a1Q05722 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Col9a1Q05722 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col9a1Q05722 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col9a1Q05722 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col9a1Q05722 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col9a1Q05722 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Col9a1Q05722 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Col9a1Q05722 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Col9a1Q05722 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Col9a1Q05722 Gm15148-201ENSMUST00000117602 156 ntBASIC5.59□□□□□ -1.51
Col9a1Q05722 Gm25283-201ENSMUST00000157272 77 ntBASIC5.59□□□□□ -1.51
Col9a1Q05722 Gm23644-201ENSMUST00000157856 77 ntBASIC5.59□□□□□ -1.51
Col9a1Q05722 Gm29218-205ENSMUST00000190846 615 ntBASIC5.59□□□□□ -1.51
Col9a1Q05722 Gm37882-201ENSMUST00000195254 196 ntBASIC5.59□□□□□ -1.51
Col9a1Q05722 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC5.59□□□□□ -1.51
Col9a1Q05722 Gm18502-201ENSMUST00000218679 199 ntBASIC5.59□□□□□ -1.51
Col9a1Q05722 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col9a1Q05722 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Col9a1Q05722 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col9a1Q05722 AL591843.1-201ENSMUST00000223686 3082 ntBASIC5.59□□□□□ -1.51
Col9a1Q05722 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col9a1Q05722 Gm43285-201ENSMUST00000196563 3592 ntBASIC5.59□□□□□ -1.51
Col9a1Q05722 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col9a1Q05722 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col9a1Q05722 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Col9a1Q05722 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.59□□□□□ -1.52
Col9a1Q05722 Gm37053-201ENSMUST00000192399 2087 ntBASIC5.59□□□□□ -1.52
Col9a1Q05722 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Col9a1Q05722 Gm37347-201ENSMUST00000193969 3071 ntBASIC5.59□□□□□ -1.52
Col9a1Q05722 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col9a1Q05722 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC5.58□□□□□ -1.52
Col9a1Q05722 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col9a1Q05722 Gm28379-202ENSMUST00000187676 2896 ntBASIC5.58□□□□□ -1.52
Col9a1Q05722 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col9a1Q05722 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Col9a1Q05722 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col9a1Q05722 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC5.58□□□□□ -1.52
Col9a1Q05722 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col9a1Q05722 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
Col9a1Q05722 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col9a1Q05722 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Col9a1Q05722 Gm15282-201ENSMUST00000117707 300 ntBASIC5.58□□□□□ -1.52
Col9a1Q05722 Gm12793-201ENSMUST00000119268 292 ntBASIC5.58□□□□□ -1.52
Col9a1Q05722 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col9a1Q05722 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC5.58□□□□□ -1.52
Col9a1Q05722 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC5.58□□□□□ -1.52
Col9a1Q05722 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC5.58□□□□□ -1.52
Col9a1Q05722 Gm16218-201ENSMUST00000155424 388 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 100.3 ms