Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm15263-201ENSMUST00000121556 642 ntBASIC5.14□□□□□ -1.59
Col6a1Q04857 Gm24371-201ENSMUST00000122662 267 ntBASIC5.14□□□□□ -1.59
Col6a1Q04857 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC5.14□□□□□ -1.59
Col6a1Q04857 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC5.14□□□□□ -1.59
Col6a1Q04857 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a1Q04857 Gm24507-201ENSMUST00000157683 134 ntBASIC5.14□□□□□ -1.59
Col6a1Q04857 Gm19427-201ENSMUST00000183619 208 ntBASIC5.14□□□□□ -1.59
Col6a1Q04857 Gm37817-201ENSMUST00000195276 434 ntBASIC5.14□□□□□ -1.59
Col6a1Q04857 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC5.14□□□□□ -1.59
Col6a1Q04857 Gm43925-201ENSMUST00000203498 206 ntBASIC5.14□□□□□ -1.59
Col6a1Q04857 Gm35876-201ENSMUST00000205044 459 ntBASIC5.14□□□□□ -1.59
Col6a1Q04857 Gm44816-201ENSMUST00000206666 477 ntBASIC5.14□□□□□ -1.59
Col6a1Q04857 Gm45539-201ENSMUST00000210313 428 ntBASIC5.14□□□□□ -1.59
Col6a1Q04857 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Col6a1Q04857 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Col6a1Q04857 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC5.14□□□□□ -1.59
Col6a1Q04857 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a1Q04857 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Col6a1Q04857 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Col6a1Q04857 Gm44518-201ENSMUST00000208080 4370 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm37999-201ENSMUST00000195178 1809 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm13961-201ENSMUST00000119282 4772 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm36931-201ENSMUST00000192997 4801 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a1Q04857 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm44822-201ENSMUST00000208559 6389 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a1Q04857 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm26075-201ENSMUST00000104062 121 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm14469-201ENSMUST00000118363 202 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm14619-201ENSMUST00000120480 168 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm14765-201ENSMUST00000121954 326 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm2182-201ENSMUST00000145243 663 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm24784-201ENSMUST00000157640 62 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm17062-201ENSMUST00000166987 461 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm22263-201ENSMUST00000180060 104 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm29512-201ENSMUST00000185544 315 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm28110-201ENSMUST00000185782 315 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm28304-201ENSMUST00000185977 312 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm28838-201ENSMUST00000186338 315 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm29057-201ENSMUST00000186468 315 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm29661-201ENSMUST00000186781 315 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm28737-201ENSMUST00000186808 315 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm29118-201ENSMUST00000186908 315 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm28433-201ENSMUST00000187085 315 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm29635-201ENSMUST00000187221 315 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm28759-201ENSMUST00000187621 315 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm28831-201ENSMUST00000187739 315 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm28200-201ENSMUST00000187778 315 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm29026-201ENSMUST00000187787 315 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm28752-201ENSMUST00000188340 315 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm28797-201ENSMUST00000188543 315 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm28855-201ENSMUST00000188680 315 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm29378-201ENSMUST00000188723 315 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm28569-201ENSMUST00000188748 315 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm28120-201ENSMUST00000188812 315 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm28369-201ENSMUST00000188993 315 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm29037-201ENSMUST00000189092 313 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm29256-201ENSMUST00000189094 312 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm28909-201ENSMUST00000189406 315 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm28705-201ENSMUST00000189548 315 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm28861-201ENSMUST00000189681 315 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm29180-201ENSMUST00000190003 315 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm28939-201ENSMUST00000190351 315 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm28223-201ENSMUST00000190469 315 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm29575-201ENSMUST00000190597 315 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm28484-201ENSMUST00000190606 312 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm29092-201ENSMUST00000190768 315 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm29469-201ENSMUST00000191448 315 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm32175-201ENSMUST00000193641 346 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm38080-201ENSMUST00000194035 268 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm7449-201ENSMUST00000194393 663 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm44609-201ENSMUST00000207157 460 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC5.13□□□□□ -1.59
Col6a1Q04857 CT009718.4-201ENSMUST00000221881 109 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 AC147633.1-201ENSMUST00000225134 259 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 AC154335.2-201ENSMUST00000225916 638 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 AC174459.2-201ENSMUST00000226036 160 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 AC123656.2-201ENSMUST00000226726 227 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 AC151833.1-201ENSMUST00000227752 574 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm7117-201ENSMUST00000071515 387 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm22740-201ENSMUST00000083439 109 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Mir338-201ENSMUST00000083666 98 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm23848-201ENSMUST00000083826 106 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Olfr713-201ENSMUST00000098139 975 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm38091-201ENSMUST00000192418 3871 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm44789-201ENSMUST00000207195 3101 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Col6a1Q04857 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Col6a1Q04857 Gm11284-201ENSMUST00000121910 1887 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Col6a1Q04857 AC126673.1-201ENSMUST00000223208 3856 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC5.13□□□□□ -1.59
Col6a1Q04857 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a1Q04857 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC5.12□□□□□ -1.59
Col6a1Q04857 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms