Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Scn1bP97952 Gm15733-201ENSMUST00000132957 242 ntBASIC3.3□□□□□ -1.88
Scn1bP97952 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC3.3□□□□□ -1.88
Scn1bP97952 Gm25965-201ENSMUST00000157170 93 ntBASIC3.3□□□□□ -1.88
Scn1bP97952 Gm26173-201ENSMUST00000158416 136 ntBASIC3.3□□□□□ -1.88
Scn1bP97952 Gm23023-201ENSMUST00000158767 109 ntBASIC3.3□□□□□ -1.88
Scn1bP97952 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC3.3□□□□□ -1.88
Scn1bP97952 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Scn1bP97952 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Scn1bP97952 Gm6625-201ENSMUST00000177870 272 ntBASIC3.3□□□□□ -1.88
Scn1bP97952 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Scn1bP97952 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC3.3□□□□□ -1.88
Scn1bP97952 Gm19641-201ENSMUST00000188432 417 ntBASIC3.3□□□□□ -1.88
Scn1bP97952 Gm28745-201ENSMUST00000190069 305 ntBASIC3.3□□□□□ -1.88
Scn1bP97952 Gm37828-201ENSMUST00000192496 432 ntBASIC3.3□□□□□ -1.88
Scn1bP97952 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC3.3□□□□□ -1.88
Scn1bP97952 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Scn1bP97952 Gm19147-201ENSMUST00000199622 652 ntBASIC3.3□□□□□ -1.88
Scn1bP97952 Gm42857-201ENSMUST00000200823 339 ntBASIC3.3□□□□□ -1.88
Scn1bP97952 Gm17991-201ENSMUST00000208139 297 ntBASIC3.3□□□□□ -1.88
Scn1bP97952 Gm45588-201ENSMUST00000211213 630 ntBASIC3.3□□□□□ -1.88
Scn1bP97952 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC3.3□□□□□ -1.88
Scn1bP97952 AL669916.3-201ENSMUST00000213855 94 ntBASIC3.3□□□□□ -1.88
Scn1bP97952 AL669916.6-201ENSMUST00000214610 94 ntBASIC3.3□□□□□ -1.88
Scn1bP97952 AL669916.4-201ENSMUST00000215976 94 ntBASIC3.3□□□□□ -1.88
Scn1bP97952 AL669916.1-201ENSMUST00000217640 94 ntBASIC3.3□□□□□ -1.88
Scn1bP97952 Gm18557-201ENSMUST00000218710 433 ntBASIC3.3□□□□□ -1.88
Scn1bP97952 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC3.3□□□□□ -1.88
Scn1bP97952 AC155305.1-201ENSMUST00000222207 319 ntBASIC3.3□□□□□ -1.88
Scn1bP97952 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Scn1bP97952 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Scn1bP97952 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Scn1bP97952 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Scn1bP97952 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Scn1bP97952 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Scn1bP97952 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Scn1bP97952 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Scn1bP97952 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
Scn1bP97952 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Scn1bP97952 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Scn1bP97952 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Scn1bP97952 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Scn1bP97952 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Scn1bP97952 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
Scn1bP97952 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Scn1bP97952 Gm15659-201ENSMUST00000118881 341 ntBASIC3.29□□□□□ -1.88
Scn1bP97952 Gm12515-201ENSMUST00000120116 361 ntBASIC3.29□□□□□ -1.88
Scn1bP97952 Gm14240-201ENSMUST00000120353 546 ntBASIC3.29□□□□□ -1.88
Scn1bP97952 Gm23118-201ENSMUST00000122657 187 ntBASIC3.29□□□□□ -1.88
Scn1bP97952 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC3.29□□□□□ -1.88
Scn1bP97952 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Scn1bP97952 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.29□□□□□ -1.88
Scn1bP97952 Gm25386-201ENSMUST00000157814 288 ntBASIC3.29□□□□□ -1.88
Scn1bP97952 Gm22637-201ENSMUST00000158144 283 ntBASIC3.29□□□□□ -1.88
Scn1bP97952 Gm24552-201ENSMUST00000158646 103 ntBASIC3.29□□□□□ -1.88
Scn1bP97952 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC3.29□□□□□ -1.88
Scn1bP97952 Gm20701-201ENSMUST00000176082 347 ntBASIC3.29□□□□□ -1.88
Scn1bP97952 Gm18417-201ENSMUST00000176564 648 ntBASIC3.29□□□□□ -1.88
Scn1bP97952 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Scn1bP97952 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Scn1bP97952 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Scn1bP97952 Gm26866-201ENSMUST00000180414 802 ntBASIC3.29□□□□□ -1.88
Scn1bP97952 Mir6914-201ENSMUST00000184999 69 ntBASIC3.29□□□□□ -1.88
Scn1bP97952 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.29□□□□□ -1.88
Scn1bP97952 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Scn1bP97952 Crs-ps-201ENSMUST00000203723 760 ntBASIC3.29□□□□□ -1.88
Scn1bP97952 Gm8820-201ENSMUST00000204077 571 ntBASIC3.29□□□□□ -1.88
Scn1bP97952 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC3.29□□□□□ -1.88
Scn1bP97952 Gm44030-201ENSMUST00000204865 432 ntBASIC3.29□□□□□ -1.88
Scn1bP97952 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.29□□□□□ -1.88
Scn1bP97952 Gm45173-201ENSMUST00000206819 305 ntBASIC3.29□□□□□ -1.88
Scn1bP97952 Gm46193-201ENSMUST00000219399 364 ntBASIC3.29□□□□□ -1.88
Scn1bP97952 AC159297.2-201ENSMUST00000219567 1075 ntBASIC3.29□□□□□ -1.88
Scn1bP97952 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC3.29□□□□□ -1.88
Scn1bP97952 AC159621.1-201ENSMUST00000223249 163 ntBASIC3.29□□□□□ -1.88
Scn1bP97952 AC158395.1-201ENSMUST00000227206 452 ntBASIC3.29□□□□□ -1.88
Scn1bP97952 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Scn1bP97952 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Scn1bP97952 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Scn1bP97952 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Scn1bP97952 Gm24626-201ENSMUST00000082621 161 ntBASIC3.29□□□□□ -1.88
Scn1bP97952 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Scn1bP97952 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Scn1bP97952 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Scn1bP97952 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.28□□□□□ -1.88
Scn1bP97952 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Scn1bP97952 AC159188.2-201ENSMUST00000224103 1301 ntBASIC3.28□□□□□ -1.88
Scn1bP97952 Gm25414-201ENSMUST00000101814 107 ntBASIC3.28□□□□□ -1.88
Scn1bP97952 Gm25563-201ENSMUST00000104603 74 ntBASIC3.28□□□□□ -1.88
Scn1bP97952 Mir291a-201ENSMUST00000104815 82 ntBASIC3.28□□□□□ -1.88
Scn1bP97952 Gm23178-201ENSMUST00000116782 95 ntBASIC3.28□□□□□ -1.88
Scn1bP97952 Mir1192-201ENSMUST00000116976 121 ntBASIC3.28□□□□□ -1.88
Scn1bP97952 Gm12102-201ENSMUST00000118251 604 ntBASIC3.28□□□□□ -1.88
Scn1bP97952 Gm11813-201ENSMUST00000118586 291 ntBASIC3.28□□□□□ -1.88
Scn1bP97952 Amd-ps1-201ENSMUST00000120127 994 ntBASIC3.28□□□□□ -1.88
Scn1bP97952 Gm14867-201ENSMUST00000120156 866 ntBASIC3.28□□□□□ -1.88
Scn1bP97952 Gm11438-201ENSMUST00000121582 189 ntBASIC3.28□□□□□ -1.88
Scn1bP97952 Gm16250-201ENSMUST00000148974 256 ntBASIC3.28□□□□□ -1.88
Scn1bP97952 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC3.28□□□□□ -1.88
Scn1bP97952 Gm24059-201ENSMUST00000157493 312 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 111.9 ms