Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm44727-201ENSMUST00000204225 451 ntBASIC3.64□□□□□ -1.83
NcanP55066 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.64□□□□□ -1.83
NcanP55066 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC3.64□□□□□ -1.83
NcanP55066 AC115047.1-201ENSMUST00000213795 322 ntBASIC3.64□□□□□ -1.83
NcanP55066 Gm35262-201ENSMUST00000215133 267 ntBASIC3.64□□□□□ -1.83
NcanP55066 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
NcanP55066 AC160958.1-201ENSMUST00000224833 368 ntBASIC3.64□□□□□ -1.83
NcanP55066 AC154506.3-201ENSMUST00000225417 213 ntBASIC3.64□□□□□ -1.83
NcanP55066 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.64□□□□□ -1.83
NcanP55066 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
NcanP55066 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
NcanP55066 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NcanP55066 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
NcanP55066 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NcanP55066 Gm43092-201ENSMUST00000202986 1854 ntBASIC3.64□□□□□ -1.83
NcanP55066 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NcanP55066 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
NcanP55066 Gm42447-201ENSMUST00000200102 2903 ntBASIC3.64□□□□□ -1.83
NcanP55066 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
NcanP55066 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
NcanP55066 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
NcanP55066 Gm23322-201ENSMUST00000104464 167 ntBASIC3.63□□□□□ -1.83
NcanP55066 Gm14579-201ENSMUST00000117068 283 ntBASIC3.63□□□□□ -1.83
NcanP55066 Gm14627-201ENSMUST00000118931 567 ntBASIC3.63□□□□□ -1.83
NcanP55066 Gm13743-201ENSMUST00000121486 724 ntBASIC3.63□□□□□ -1.83
NcanP55066 Gm26424-201ENSMUST00000122530 104 ntBASIC3.63□□□□□ -1.83
NcanP55066 Gm25318-201ENSMUST00000122554 314 ntBASIC3.63□□□□□ -1.83
NcanP55066 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC3.63□□□□□ -1.83
NcanP55066 Gm22794-201ENSMUST00000157228 306 ntBASIC3.63□□□□□ -1.83
NcanP55066 Gm3221-201ENSMUST00000164869 440 ntBASIC3.63□□□□□ -1.83
NcanP55066 Gm2930-201ENSMUST00000170403 474 ntBASIC3.63□□□□□ -1.83
NcanP55066 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
NcanP55066 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC3.63□□□□□ -1.83
NcanP55066 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC3.63□□□□□ -1.83
NcanP55066 Gm27817-201ENSMUST00000184302 233 ntBASIC3.63□□□□□ -1.83
NcanP55066 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.63□□□□□ -1.83
NcanP55066 Gm6501-201ENSMUST00000187178 916 ntBASIC3.63□□□□□ -1.83
NcanP55066 Gm28384-201ENSMUST00000189079 463 ntBASIC3.63□□□□□ -1.83
NcanP55066 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.63□□□□□ -1.83
NcanP55066 Gm42850-201ENSMUST00000202094 201 ntBASIC3.63□□□□□ -1.83
NcanP55066 Gm45240-201ENSMUST00000211437 674 ntBASIC3.63□□□□□ -1.83
NcanP55066 Gm5917-201ENSMUST00000217638 721 ntBASIC3.63□□□□□ -1.83
NcanP55066 AC126690.1-201ENSMUST00000228898 397 ntBASIC3.63□□□□□ -1.83
NcanP55066 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NcanP55066 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
NcanP55066 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
NcanP55066 Gm24707-201ENSMUST00000082812 107 ntBASIC3.63□□□□□ -1.83
NcanP55066 Mir463-201ENSMUST00000093570 75 ntBASIC3.63□□□□□ -1.83
NcanP55066 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.63□□□□□ -1.83
NcanP55066 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NcanP55066 Gm44708-201ENSMUST00000205580 2237 ntBASIC3.63□□□□□ -1.83
NcanP55066 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NcanP55066 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
NcanP55066 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
NcanP55066 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
NcanP55066 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC3.62□□□□□ -1.83
NcanP55066 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.62□□□□□ -1.83
NcanP55066 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
NcanP55066 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NcanP55066 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
NcanP55066 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.62□□□□□ -1.83
NcanP55066 Gm14007-201ENSMUST00000118288 210 ntBASIC3.62□□□□□ -1.83
NcanP55066 Gm14607-201ENSMUST00000119119 491 ntBASIC3.62□□□□□ -1.83
NcanP55066 Gm11404-201ENSMUST00000120872 494 ntBASIC3.62□□□□□ -1.83
NcanP55066 Gm14559-201ENSMUST00000121745 496 ntBASIC3.62□□□□□ -1.83
NcanP55066 Gm13868-201ENSMUST00000122411 294 ntBASIC3.62□□□□□ -1.83
NcanP55066 Gm22208-201ENSMUST00000122658 110 ntBASIC3.62□□□□□ -1.83
NcanP55066 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC3.62□□□□□ -1.83
NcanP55066 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.62□□□□□ -1.83
NcanP55066 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC3.62□□□□□ -1.83
NcanP55066 Gm22722-201ENSMUST00000157467 132 ntBASIC3.62□□□□□ -1.83
NcanP55066 Gm25555-201ENSMUST00000158078 111 ntBASIC3.62□□□□□ -1.83
NcanP55066 Gm22833-201ENSMUST00000158292 132 ntBASIC3.62□□□□□ -1.83
NcanP55066 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC3.62□□□□□ -1.83
NcanP55066 Gm19203-201ENSMUST00000174049 939 ntBASIC3.62□□□□□ -1.83
NcanP55066 Gm20672-201ENSMUST00000176605 261 ntBASIC3.62□□□□□ -1.83
NcanP55066 Gm23145-201ENSMUST00000178912 79 ntBASIC3.62□□□□□ -1.83
NcanP55066 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
NcanP55066 Mir6401-201ENSMUST00000184499 109 ntBASIC3.62□□□□□ -1.83
NcanP55066 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC3.62□□□□□ -1.83
NcanP55066 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC3.62□□□□□ -1.83
NcanP55066 Ighv1-41-201ENSMUST00000194414 329 ntBASIC3.62□□□□□ -1.83
NcanP55066 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC3.62□□□□□ -1.83
NcanP55066 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC3.62□□□□□ -1.83
NcanP55066 Amd-ps5-201ENSMUST00000198406 989 ntBASIC3.62□□□□□ -1.83
NcanP55066 Gm44609-201ENSMUST00000207157 460 ntBASIC3.62□□□□□ -1.83
NcanP55066 Gm6112-201ENSMUST00000208037 629 ntBASIC3.62□□□□□ -1.83
NcanP55066 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC3.62□□□□□ -1.83
NcanP55066 Gm18644-201ENSMUST00000211458 815 ntBASIC3.62□□□□□ -1.83
NcanP55066 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC3.62□□□□□ -1.83
NcanP55066 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC3.62□□□□□ -1.83
NcanP55066 AC158523.1-201ENSMUST00000221398 328 ntBASIC3.62□□□□□ -1.83
NcanP55066 AC120540.1-201ENSMUST00000221879 324 ntBASIC3.62□□□□□ -1.83
NcanP55066 CT025579.1-201ENSMUST00000223779 366 ntBASIC3.62□□□□□ -1.83
NcanP55066 AC168062.2-201ENSMUST00000228907 422 ntBASIC3.62□□□□□ -1.83
NcanP55066 n-R5s40-201ENSMUST00000082475 124 ntBASIC3.62□□□□□ -1.83
NcanP55066 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
NcanP55066 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
NcanP55066 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
NcanP55066 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 102 ms