Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm11490-201ENSMUST00000118128 272 ntBASIC4.95□□□□□ -1.62
Sox1P53783 Gm12155-201ENSMUST00000121267 160 ntBASIC4.95□□□□□ -1.62
Sox1P53783 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC4.95□□□□□ -1.62
Sox1P53783 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC4.95□□□□□ -1.62
Sox1P53783 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Sox1P53783 Gm16125-201ENSMUST00000159003 339 ntBASIC4.95□□□□□ -1.62
Sox1P53783 Gm3851-201ENSMUST00000168653 318 ntBASIC4.95□□□□□ -1.62
Sox1P53783 Gm25999-201ENSMUST00000175398 133 ntBASIC4.95□□□□□ -1.62
Sox1P53783 Mup-ps11-201ENSMUST00000178040 545 ntBASIC4.95□□□□□ -1.62
Sox1P53783 Mup-ps3-201ENSMUST00000178315 545 ntBASIC4.95□□□□□ -1.62
Sox1P53783 Gm27189-201ENSMUST00000184119 190 ntBASIC4.95□□□□□ -1.62
Sox1P53783 Gm28471-201ENSMUST00000185994 615 ntBASIC4.95□□□□□ -1.62
Sox1P53783 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC4.95□□□□□ -1.62
Sox1P53783 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC4.95□□□□□ -1.62
Sox1P53783 Gm37568-201ENSMUST00000191755 364 ntBASIC4.95□□□□□ -1.62
Sox1P53783 Gm42570-201ENSMUST00000195937 292 ntBASIC4.95□□□□□ -1.62
Sox1P53783 Gm9317-201ENSMUST00000197055 862 ntBASIC4.95□□□□□ -1.62
Sox1P53783 Gm44925-201ENSMUST00000208879 2110 ntBASIC4.95□□□□□ -1.62
Sox1P53783 AC122225.1-201ENSMUST00000215641 369 ntBASIC4.95□□□□□ -1.62
Sox1P53783 Gm7540-201ENSMUST00000219764 926 ntBASIC4.95□□□□□ -1.62
Sox1P53783 AC154335.2-201ENSMUST00000225916 638 ntBASIC4.95□□□□□ -1.62
Sox1P53783 AC129541.1-201ENSMUST00000226940 523 ntBASIC4.95□□□□□ -1.62
Sox1P53783 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Sox1P53783 n-R5s50-201ENSMUST00000083168 111 ntBASIC4.95□□□□□ -1.62
Sox1P53783 Gm25755-201ENSMUST00000083396 107 ntBASIC4.95□□□□□ -1.62
Sox1P53783 Gm25207-201ENSMUST00000093745 107 ntBASIC4.95□□□□□ -1.62
Sox1P53783 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Sox1P53783 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Sox1P53783 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Sox1P53783 Gm45222-201ENSMUST00000207029 4307 ntBASIC4.95□□□□□ -1.62
Sox1P53783 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Sox1P53783 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
Sox1P53783 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Sox1P53783 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC4.95□□□□□ -1.62
Sox1P53783 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Sox1P53783 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC4.95□□□□□ -1.62
Sox1P53783 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Sox1P53783 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Sox1P53783 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Sox1P53783 Gm43567-201ENSMUST00000197581 1978 ntBASIC4.95□□□□□ -1.62
Sox1P53783 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Sox1P53783 Gm43283-201ENSMUST00000199138 2548 ntBASIC4.94□□□□□ -1.62
Sox1P53783 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Sox1P53783 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Sox1P53783 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Sox1P53783 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC4.94□□□□□ -1.62
Sox1P53783 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Sox1P53783 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Sox1P53783 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Sox1P53783 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
Sox1P53783 Gm14792-201ENSMUST00000119725 258 ntBASIC4.94□□□□□ -1.62
Sox1P53783 Gm8880-201ENSMUST00000121800 454 ntBASIC4.94□□□□□ -1.62
Sox1P53783 Gm13725-201ENSMUST00000122139 207 ntBASIC4.94□□□□□ -1.62
Sox1P53783 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Sox1P53783 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.94□□□□□ -1.62
Sox1P53783 Gm24914-201ENSMUST00000157285 313 ntBASIC4.94□□□□□ -1.62
Sox1P53783 Gm22084-201ENSMUST00000157585 105 ntBASIC4.94□□□□□ -1.62
Sox1P53783 Gm23312-201ENSMUST00000158774 102 ntBASIC4.94□□□□□ -1.62
Sox1P53783 Gm23816-201ENSMUST00000179617 132 ntBASIC4.94□□□□□ -1.62
Sox1P53783 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC4.94□□□□□ -1.62
Sox1P53783 Gm36934-201ENSMUST00000192007 306 ntBASIC4.94□□□□□ -1.62
Sox1P53783 Gm7871-201ENSMUST00000195346 618 ntBASIC4.94□□□□□ -1.62
Sox1P53783 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC4.94□□□□□ -1.62
Sox1P53783 Gm4248-201ENSMUST00000196905 316 ntBASIC4.94□□□□□ -1.62
Sox1P53783 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC4.94□□□□□ -1.62
Sox1P53783 Gm18320-201ENSMUST00000211304 595 ntBASIC4.94□□□□□ -1.62
Sox1P53783 AC165157.3-201ENSMUST00000220815 103 ntBASIC4.94□□□□□ -1.62
Sox1P53783 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Sox1P53783 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Sox1P53783 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Sox1P53783 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Sox1P53783 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Sox1P53783 Gm36931-201ENSMUST00000192997 4801 ntBASIC4.94□□□□□ -1.62
Sox1P53783 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Sox1P53783 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Sox1P53783 CT009510.2-203ENSMUST00000226704 2136 ntBASIC4.94□□□□□ -1.62
Sox1P53783 Gm44894-201ENSMUST00000205280 2174 ntBASIC4.94□□□□□ -1.62
Sox1P53783 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
Sox1P53783 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Sox1P53783 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Sox1P53783 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Sox1P53783 Gm42991-201ENSMUST00000196468 3837 ntBASIC4.93□□□□□ -1.62
Sox1P53783 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Sox1P53783 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Sox1P53783 AC151971.5-201ENSMUST00000214422 3254 ntBASIC4.93□□□□□ -1.62
Sox1P53783 Gm4855-201ENSMUST00000192270 1967 ntBASIC4.93□□□□□ -1.62
Sox1P53783 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
Sox1P53783 Mir743b-201ENSMUST00000104751 77 ntBASIC4.93□□□□□ -1.62
Sox1P53783 Gm13550-201ENSMUST00000118185 525 ntBASIC4.93□□□□□ -1.62
Sox1P53783 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Sox1P53783 Gm12042-201ENSMUST00000120479 301 ntBASIC4.93□□□□□ -1.62
Sox1P53783 Gm6565-201ENSMUST00000121217 438 ntBASIC4.93□□□□□ -1.62
Sox1P53783 Gm25624-201ENSMUST00000157222 275 ntBASIC4.93□□□□□ -1.62
Sox1P53783 Gm23120-201ENSMUST00000157654 287 ntBASIC4.93□□□□□ -1.62
Sox1P53783 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
Sox1P53783 Gm7958-201ENSMUST00000178255 468 ntBASIC4.93□□□□□ -1.62
Sox1P53783 Gm7950-201ENSMUST00000179633 468 ntBASIC4.93□□□□□ -1.62
Sox1P53783 Gm27747-201ENSMUST00000184707 85 ntBASIC4.93□□□□□ -1.62
Sox1P53783 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC4.93□□□□□ -1.62
Sox1P53783 Gm28744-201ENSMUST00000189939 340 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms