Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HttP42859 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HttP42859 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HttP42859 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HttP42859 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HttP42859 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HttP42859 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HttP42859 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HttP42859 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HttP42859 Gm29163-201ENSMUST00000188029 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HttP42859 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HttP42859 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HttP42859 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HttP42859 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HttP42859 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HttP42859 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HttP42859 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HttP42859 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HttP42859 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.32□□□□□ -2.04
HttP42859 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
HttP42859 Gm22246-201ENSMUST00000082478 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm22306-201ENSMUST00000082692 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm26331-201ENSMUST00000082824 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm25698-201ENSMUST00000082897 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm24205-201ENSMUST00000082953 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm22505-201ENSMUST00000082956 108 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm25405-201ENSMUST00000082973 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm22628-201ENSMUST00000082988 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm22363-201ENSMUST00000083100 108 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm26496-201ENSMUST00000083150 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm24458-201ENSMUST00000083204 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm23814-201ENSMUST00000083230 102 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm23815-201ENSMUST00000083231 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm25790-201ENSMUST00000083293 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm22295-201ENSMUST00000083311 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm25127-201ENSMUST00000083336 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm25583-201ENSMUST00000083413 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm24414-201ENSMUST00000083434 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm23095-201ENSMUST00000083446 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm24803-201ENSMUST00000083693 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm22580-201ENSMUST00000083727 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm24260-201ENSMUST00000083741 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm22682-201ENSMUST00000083854 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm25869-201ENSMUST00000083855 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm24693-201ENSMUST00000083885 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm26317-201ENSMUST00000083894 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm22798-201ENSMUST00000083992 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm26427-201ENSMUST00000093648 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm22444-201ENSMUST00000093693 108 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm22170-201ENSMUST00000097247 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HttP42859 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HttP42859 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HttP42859 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
HttP42859 Gm14602-201ENSMUST00000118625 340 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm17194-201ENSMUST00000164610 348 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm26652-202ENSMUST00000181672 475 ntBASIC2.32□□□□□ -2.04
HttP42859 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HttP42859 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
HttP42859 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
HttP42859 Snord53-201ENSMUST00000175146 78 ntBASIC2.31□□□□□ -2.04
HttP42859 Gm28744-201ENSMUST00000189939 340 ntBASIC2.31□□□□□ -2.04
HttP42859 Gm5670-201ENSMUST00000093546 372 ntBASIC2.31□□□□□ -2.04
HttP42859 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
HttP42859 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC2.31□□□□□ -2.04
HttP42859 AC159472.1-201ENSMUST00000218178 463 ntBASIC2.31□□□□□ -2.04
HttP42859 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
HttP42859 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
HttP42859 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
HttP42859 Gm12891-201ENSMUST00000119358 240 ntBASIC2.31□□□□□ -2.04
HttP42859 Gm8430-201ENSMUST00000119780 471 ntBASIC2.31□□□□□ -2.04
HttP42859 Gm15452-201ENSMUST00000119877 240 ntBASIC2.31□□□□□ -2.04
HttP42859 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC2.31□□□□□ -2.04
HttP42859 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.31□□□□□ -2.04
HttP42859 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
HttP42859 Gm18043-201ENSMUST00000216741 739 ntBASIC2.31□□□□□ -2.04
HttP42859 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC2.31□□□□□ -2.04
HttP42859 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
HttP42859 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
HttP42859 Gm14119-201ENSMUST00000119511 235 ntBASIC2.3□□□□□ -2.04
HttP42859 Gm12706-201ENSMUST00000121588 698 ntBASIC2.3□□□□□ -2.04
HttP42859 Gm16328-201ENSMUST00000126985 196 ntBASIC2.3□□□□□ -2.04
HttP42859 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC2.3□□□□□ -2.04
HttP42859 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.3□□□□□ -2.04
HttP42859 Gm22716-201ENSMUST00000177596 107 ntBASIC2.3□□□□□ -2.04
HttP42859 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
HttP42859 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC2.3□□□□□ -2.04
HttP42859 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC2.3□□□□□ -2.04
HttP42859 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC2.3□□□□□ -2.04
HttP42859 Gm29884-201ENSMUST00000218403 453 ntBASIC2.3□□□□□ -2.04
HttP42859 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC2.3□□□□□ -2.04
HttP42859 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.3□□□□□ -2.04
HttP42859 AC163646.2-201ENSMUST00000227962 141 ntBASIC2.3□□□□□ -2.04
HttP42859 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
HttP42859 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC2.3□□□□□ -2.04
HttP42859 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
HttP42859 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
HttP42859 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
HttP42859 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms