Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC2.57□□□□□ -2
Sdc1P18828 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC2.57□□□□□ -2
Sdc1P18828 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC2.57□□□□□ -2
Sdc1P18828 Gm43393-201ENSMUST00000200147 194 ntBASIC2.57□□□□□ -2
Sdc1P18828 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC2.57□□□□□ -2
Sdc1P18828 Gm44332-201ENSMUST00000203712 433 ntBASIC2.57□□□□□ -2
Sdc1P18828 Gm45553-201ENSMUST00000209929 507 ntBASIC2.57□□□□□ -2
Sdc1P18828 CT573422.1-201ENSMUST00000216655 405 ntBASIC2.57□□□□□ -2
Sdc1P18828 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC2.57□□□□□ -2
Sdc1P18828 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC2.57□□□□□ -2
Sdc1P18828 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.57□□□□□ -2
Sdc1P18828 AC122448.1-201ENSMUST00000226317 772 ntBASIC2.57□□□□□ -2
Sdc1P18828 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.57□□□□□ -2
Sdc1P18828 AC121114.1-201ENSMUST00000228522 570 ntBASIC2.57□□□□□ -2
Sdc1P18828 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC2.57□□□□□ -2
Sdc1P18828 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC2.57□□□□□ -2
Sdc1P18828 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC2.57□□□□□ -2
Sdc1P18828 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Sdc1P18828 Snord35b-201ENSMUST00000082833 87 ntBASIC2.57□□□□□ -2
Sdc1P18828 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC2.57□□□□□ -2
Sdc1P18828 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Sdc1P18828 AC159188.2-201ENSMUST00000224103 1301 ntBASIC2.57□□□□□ -2
Sdc1P18828 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC2.57□□□□□ -2
Sdc1P18828 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Sdc1P18828 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
Sdc1P18828 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC2.56□□□□□ -2
Sdc1P18828 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Sdc1P18828 Gm22272-201ENSMUST00000104039 134 ntBASIC2.56□□□□□ -2
Sdc1P18828 Gm13329-201ENSMUST00000117063 265 ntBASIC2.56□□□□□ -2
Sdc1P18828 Gm11393-201ENSMUST00000118019 288 ntBASIC2.56□□□□□ -2
Sdc1P18828 Gm13603-201ENSMUST00000119404 83 ntBASIC2.56□□□□□ -2
Sdc1P18828 Gm13541-201ENSMUST00000119519 283 ntBASIC2.56□□□□□ -2
Sdc1P18828 Gm5937-201ENSMUST00000119715 643 ntBASIC2.56□□□□□ -2
Sdc1P18828 Gm14069-201ENSMUST00000120815 229 ntBASIC2.56□□□□□ -2
Sdc1P18828 Gm24840-201ENSMUST00000122603 147 ntBASIC2.56□□□□□ -2
Sdc1P18828 Gm23213-201ENSMUST00000122715 313 ntBASIC2.56□□□□□ -2
Sdc1P18828 Gm1989-201ENSMUST00000126244 636 ntBASIC2.56□□□□□ -2
Sdc1P18828 Gm14562-201ENSMUST00000129885 543 ntBASIC2.56□□□□□ -2
Sdc1P18828 Gm25386-201ENSMUST00000157814 288 ntBASIC2.56□□□□□ -2
Sdc1P18828 Gm24534-201ENSMUST00000157949 291 ntBASIC2.56□□□□□ -2
Sdc1P18828 Ear-ps10-201ENSMUST00000161871 460 ntBASIC2.56□□□□□ -2
Sdc1P18828 Gm17061-201ENSMUST00000163167 499 ntBASIC2.56□□□□□ -2
Sdc1P18828 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC2.56□□□□□ -2
Sdc1P18828 Gm8816-201ENSMUST00000182280 1163 ntBASIC2.56□□□□□ -2
Sdc1P18828 Gm27189-201ENSMUST00000184119 190 ntBASIC2.56□□□□□ -2
Sdc1P18828 Mir6372-201ENSMUST00000185114 109 ntBASIC2.56□□□□□ -2
Sdc1P18828 Gm29288-201ENSMUST00000191582 901 ntBASIC2.56□□□□□ -2
Sdc1P18828 Gm38149-201ENSMUST00000191943 339 ntBASIC2.56□□□□□ -2
Sdc1P18828 Gm6680-201ENSMUST00000192789 950 ntBASIC2.56□□□□□ -2
Sdc1P18828 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.56□□□□□ -2
Sdc1P18828 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC2.56□□□□□ -2
Sdc1P18828 Gm45379-201ENSMUST00000211772 549 ntBASIC2.56□□□□□ -2
Sdc1P18828 AC153971.2-201ENSMUST00000214553 777 ntBASIC2.56□□□□□ -2
Sdc1P18828 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC2.56□□□□□ -2
Sdc1P18828 Gm3333-202ENSMUST00000221763 1044 ntBASIC2.56□□□□□ -2
Sdc1P18828 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC2.56□□□□□ -2
Sdc1P18828 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.56□□□□□ -2
Sdc1P18828 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
Sdc1P18828 Gm43663-201ENSMUST00000198643 1505 ntBASIC2.56□□□□□ -2
Sdc1P18828 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Sdc1P18828 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Sdc1P18828 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Sdc1P18828 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.56□□□□□ -2
Sdc1P18828 Gm42768-201ENSMUST00000197734 2897 ntBASIC2.55□□□□□ -2
Sdc1P18828 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.55□□□□□ -2
Sdc1P18828 Gm23691-201ENSMUST00000101878 107 ntBASIC2.55□□□□□ -2
Sdc1P18828 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC2.55□□□□□ -2
Sdc1P18828 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Sdc1P18828 Gm2066-201ENSMUST00000118046 389 ntBASIC2.55□□□□□ -2
Sdc1P18828 Gm11268-201ENSMUST00000118347 267 ntBASIC2.55□□□□□ -2
Sdc1P18828 Gm14358-201ENSMUST00000118458 403 ntBASIC2.55□□□□□ -2
Sdc1P18828 Gm2318-201ENSMUST00000119623 639 ntBASIC2.55□□□□□ -2
Sdc1P18828 Gm14159-201ENSMUST00000119832 451 ntBASIC2.55□□□□□ -2
Sdc1P18828 Gm2005-201ENSMUST00000120759 542 ntBASIC2.55□□□□□ -2
Sdc1P18828 Gm4852-201ENSMUST00000121202 729 ntBASIC2.55□□□□□ -2
Sdc1P18828 Gm14581-201ENSMUST00000121726 198 ntBASIC2.55□□□□□ -2
Sdc1P18828 n-R5s68-201ENSMUST00000122639 82 ntBASIC2.55□□□□□ -2
Sdc1P18828 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC2.55□□□□□ -2
Sdc1P18828 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC2.55□□□□□ -2
Sdc1P18828 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC2.55□□□□□ -2
Sdc1P18828 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Sdc1P18828 Gm17183-201ENSMUST00000171170 493 ntBASIC2.55□□□□□ -2
Sdc1P18828 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC2.55□□□□□ -2
Sdc1P18828 Gm22858-201ENSMUST00000174972 76 ntBASIC2.55□□□□□ -2
Sdc1P18828 Gm25470-201ENSMUST00000175576 111 ntBASIC2.55□□□□□ -2
Sdc1P18828 Gm7438-201ENSMUST00000177664 639 ntBASIC2.55□□□□□ -2
Sdc1P18828 Gm7408-201ENSMUST00000178014 639 ntBASIC2.55□□□□□ -2
Sdc1P18828 Gm7386-201ENSMUST00000178020 639 ntBASIC2.55□□□□□ -2
Sdc1P18828 Gm3657-201ENSMUST00000178170 639 ntBASIC2.55□□□□□ -2
Sdc1P18828 Gm7415-201ENSMUST00000178205 639 ntBASIC2.55□□□□□ -2
Sdc1P18828 Gm7398-201ENSMUST00000178589 639 ntBASIC2.55□□□□□ -2
Sdc1P18828 Gm7391-201ENSMUST00000178680 639 ntBASIC2.55□□□□□ -2
Sdc1P18828 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Sdc1P18828 Gm7375-201ENSMUST00000179232 639 ntBASIC2.55□□□□□ -2
Sdc1P18828 Gm3681-201ENSMUST00000179940 639 ntBASIC2.55□□□□□ -2
Sdc1P18828 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC2.55□□□□□ -2
Sdc1P18828 Gm38075-201ENSMUST00000191979 920 ntBASIC2.55□□□□□ -2
Sdc1P18828 Gm38281-201ENSMUST00000192301 315 ntBASIC2.55□□□□□ -2
Sdc1P18828 Gm37213-201ENSMUST00000193077 586 ntBASIC2.55□□□□□ -2
Sdc1P18828 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms