Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Mir7031-201ENSMUST00000183860 65 ntBASIC5.23□□□□□ -1.57
Msx1P13297 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC5.23□□□□□ -1.57
Msx1P13297 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC5.23□□□□□ -1.57
Msx1P13297 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC5.23□□□□□ -1.57
Msx1P13297 Gm33952-201ENSMUST00000197795 408 ntBASIC5.23□□□□□ -1.57
Msx1P13297 Gm43991-201ENSMUST00000203751 274 ntBASIC5.23□□□□□ -1.57
Msx1P13297 Gm7468-201ENSMUST00000203900 652 ntBASIC5.23□□□□□ -1.57
Msx1P13297 AC150901.1-201ENSMUST00000208407 145 ntBASIC5.23□□□□□ -1.57
Msx1P13297 Gm45660-201ENSMUST00000210267 151 ntBASIC5.23□□□□□ -1.57
Msx1P13297 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC5.23□□□□□ -1.57
Msx1P13297 AC091783.5-201ENSMUST00000224928 671 ntBASIC5.23□□□□□ -1.57
Msx1P13297 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.23□□□□□ -1.57
Msx1P13297 AC124549.1-201ENSMUST00000225912 333 ntBASIC5.23□□□□□ -1.57
Msx1P13297 CT025686.1-201ENSMUST00000227592 438 ntBASIC5.23□□□□□ -1.57
Msx1P13297 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Msx1P13297 Gm23239-201ENSMUST00000083006 181 ntBASIC5.23□□□□□ -1.57
Msx1P13297 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.23□□□□□ -1.57
Msx1P13297 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Msx1P13297 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Msx1P13297 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Msx1P13297 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Msx1P13297 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Msx1P13297 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Msx1P13297 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.23□□□□□ -1.57
Msx1P13297 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Msx1P13297 AL591843.1-201ENSMUST00000223686 3082 ntBASIC5.22□□□□□ -1.57
Msx1P13297 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC5.22□□□□□ -1.57
Msx1P13297 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Msx1P13297 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Msx1P13297 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Msx1P13297 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC5.22□□□□□ -1.57
Msx1P13297 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.22□□□□□ -1.57
Msx1P13297 Mir465b-1-201ENSMUST00000103940 79 ntBASIC5.22□□□□□ -1.57
Msx1P13297 Mir465b-2-201ENSMUST00000104662 79 ntBASIC5.22□□□□□ -1.57
Msx1P13297 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Msx1P13297 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.22□□□□□ -1.57
Msx1P13297 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Msx1P13297 Gm22315-201ENSMUST00000158010 143 ntBASIC5.22□□□□□ -1.57
Msx1P13297 Gm20450-201ENSMUST00000173652 147 ntBASIC5.22□□□□□ -1.57
Msx1P13297 Gm24304-201ENSMUST00000177635 107 ntBASIC5.22□□□□□ -1.57
Msx1P13297 Gm27855-201ENSMUST00000184122 128 ntBASIC5.22□□□□□ -1.57
Msx1P13297 Mir7087-201ENSMUST00000184840 70 ntBASIC5.22□□□□□ -1.57
Msx1P13297 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.22□□□□□ -1.57
Msx1P13297 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC5.22□□□□□ -1.57
Msx1P13297 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC5.22□□□□□ -1.57
Msx1P13297 Gm30674-201ENSMUST00000214523 392 ntBASIC5.22□□□□□ -1.57
Msx1P13297 Gm16419-201ENSMUST00000221057 625 ntBASIC5.22□□□□□ -1.57
Msx1P13297 AC154636.1-201ENSMUST00000223226 126 ntBASIC5.22□□□□□ -1.57
Msx1P13297 AC166830.2-201ENSMUST00000225821 196 ntBASIC5.22□□□□□ -1.57
Msx1P13297 AC151902.2-201ENSMUST00000226419 301 ntBASIC5.22□□□□□ -1.57
Msx1P13297 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.22□□□□□ -1.57
Msx1P13297 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Msx1P13297 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Msx1P13297 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Msx1P13297 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Msx1P13297 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Msx1P13297 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Msx1P13297 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Msx1P13297 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Msx1P13297 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Msx1P13297 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Msx1P13297 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Msx1P13297 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Msx1P13297 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Msx1P13297 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Msx1P13297 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC5.21□□□□□ -1.57
Msx1P13297 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Msx1P13297 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Msx1P13297 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Msx1P13297 Gm44829-201ENSMUST00000208008 3193 ntBASIC5.21□□□□□ -1.58
Msx1P13297 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC5.21□□□□□ -1.58
Msx1P13297 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC5.21□□□□□ -1.58
Msx1P13297 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
Msx1P13297 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Msx1P13297 Gm23472-201ENSMUST00000101806 191 ntBASIC5.21□□□□□ -1.58
Msx1P13297 Mir147-201ENSMUST00000102354 79 ntBASIC5.21□□□□□ -1.58
Msx1P13297 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
Msx1P13297 Gm25537-201ENSMUST00000103851 109 ntBASIC5.21□□□□□ -1.58
Msx1P13297 Gm22496-201ENSMUST00000104493 88 ntBASIC5.21□□□□□ -1.58
Msx1P13297 Gm24855-201ENSMUST00000104848 97 ntBASIC5.21□□□□□ -1.58
Msx1P13297 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Msx1P13297 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Msx1P13297 Gm13681-201ENSMUST00000117925 210 ntBASIC5.21□□□□□ -1.58
Msx1P13297 Gm7079-201ENSMUST00000119726 171 ntBASIC5.21□□□□□ -1.58
Msx1P13297 Gm11677-201ENSMUST00000121349 977 ntBASIC5.21□□□□□ -1.58
Msx1P13297 n-R5s24-201ENSMUST00000122518 117 ntBASIC5.21□□□□□ -1.58
Msx1P13297 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC5.21□□□□□ -1.58
Msx1P13297 Gm22321-201ENSMUST00000157152 104 ntBASIC5.21□□□□□ -1.58
Msx1P13297 Gm22084-201ENSMUST00000157585 105 ntBASIC5.21□□□□□ -1.58
Msx1P13297 Gm26170-201ENSMUST00000158419 148 ntBASIC5.21□□□□□ -1.58
Msx1P13297 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.21□□□□□ -1.58
Msx1P13297 Gm26195-201ENSMUST00000175035 101 ntBASIC5.21□□□□□ -1.58
Msx1P13297 Gm24497-201ENSMUST00000177868 191 ntBASIC5.21□□□□□ -1.58
Msx1P13297 Gm22852-201ENSMUST00000177899 101 ntBASIC5.21□□□□□ -1.58
Msx1P13297 Gm25175-201ENSMUST00000178712 79 ntBASIC5.21□□□□□ -1.58
Msx1P13297 Gm37617-201ENSMUST00000194309 159 ntBASIC5.21□□□□□ -1.58
Msx1P13297 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC5.21□□□□□ -1.58
Msx1P13297 Igkv9-128-201ENSMUST00000196602 353 ntBASIC5.21□□□□□ -1.58
Msx1P13297 Gm43193-201ENSMUST00000197732 441 ntBASIC5.21□□□□□ -1.58
Msx1P13297 Gm44470-201ENSMUST00000203913 142 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms