Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm27233-201ENSMUST00000184030 307 ntBASIC5.16□□□□□ -1.58
RaraP11416 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC5.16□□□□□ -1.58
RaraP11416 Gm35931-201ENSMUST00000203931 448 ntBASIC5.16□□□□□ -1.58
RaraP11416 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC5.16□□□□□ -1.58
RaraP11416 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RaraP11416 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
RaraP11416 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC5.16□□□□□ -1.58
RaraP11416 n-R5s160-201ENSMUST00000083096 120 ntBASIC5.16□□□□□ -1.58
RaraP11416 Gm25755-201ENSMUST00000083396 107 ntBASIC5.16□□□□□ -1.58
RaraP11416 Gm44433-201ENSMUST00000203540 4832 ntBASIC5.16□□□□□ -1.58
RaraP11416 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC5.16□□□□□ -1.58
RaraP11416 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
RaraP11416 Gm44321-201ENSMUST00000204262 2855 ntBASIC5.16□□□□□ -1.58
RaraP11416 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RaraP11416 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
RaraP11416 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RaraP11416 Gm37900-201ENSMUST00000195510 3805 ntBASIC5.16□□□□□ -1.58
RaraP11416 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC5.16□□□□□ -1.58
RaraP11416 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RaraP11416 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RaraP11416 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RaraP11416 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
RaraP11416 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
RaraP11416 Gm14652-201ENSMUST00000118479 235 ntBASIC5.15□□□□□ -1.59
RaraP11416 Gm12311-201ENSMUST00000118803 374 ntBASIC5.15□□□□□ -1.59
RaraP11416 Gm14516-201ENSMUST00000120012 252 ntBASIC5.15□□□□□ -1.59
RaraP11416 Gm12893-201ENSMUST00000121732 275 ntBASIC5.15□□□□□ -1.59
RaraP11416 n-R5s80-201ENSMUST00000122596 111 ntBASIC5.15□□□□□ -1.59
RaraP11416 Gm14298-201ENSMUST00000139032 237 ntBASIC5.15□□□□□ -1.59
RaraP11416 Gm16356-201ENSMUST00000143300 169 ntBASIC5.15□□□□□ -1.59
RaraP11416 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC5.15□□□□□ -1.59
RaraP11416 Gm26320-201ENSMUST00000157742 306 ntBASIC5.15□□□□□ -1.59
RaraP11416 Gm22769-201ENSMUST00000158367 98 ntBASIC5.15□□□□□ -1.59
RaraP11416 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
RaraP11416 Mir7012-201ENSMUST00000183900 64 ntBASIC5.15□□□□□ -1.59
RaraP11416 Gm29227-201ENSMUST00000187139 315 ntBASIC5.15□□□□□ -1.59
RaraP11416 Gm29352-201ENSMUST00000188054 544 ntBASIC5.15□□□□□ -1.59
RaraP11416 Gm29034-201ENSMUST00000188099 315 ntBASIC5.15□□□□□ -1.59
RaraP11416 Gm37129-201ENSMUST00000195791 315 ntBASIC5.15□□□□□ -1.59
RaraP11416 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC5.15□□□□□ -1.59
RaraP11416 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC5.15□□□□□ -1.59
RaraP11416 Gm19256-201ENSMUST00000218550 231 ntBASIC5.15□□□□□ -1.59
RaraP11416 Gm20368-201ENSMUST00000220716 301 ntBASIC5.15□□□□□ -1.59
RaraP11416 AC163357.1-201ENSMUST00000220847 233 ntBASIC5.15□□□□□ -1.59
RaraP11416 Gm22741-201ENSMUST00000083438 165 ntBASIC5.15□□□□□ -1.59
RaraP11416 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RaraP11416 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RaraP11416 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RaraP11416 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.15□□□□□ -1.59
RaraP11416 Gm16332-201ENSMUST00000134229 2967 ntBASIC5.15□□□□□ -1.59
RaraP11416 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RaraP11416 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RaraP11416 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
RaraP11416 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RaraP11416 AC144772.3-201ENSMUST00000228829 3126 ntBASIC5.14□□□□□ -1.59
RaraP11416 Gm42559-201ENSMUST00000201811 3532 ntBASIC5.14□□□□□ -1.59
RaraP11416 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC5.14□□□□□ -1.59
RaraP11416 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.14□□□□□ -1.59
RaraP11416 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
RaraP11416 Gm13961-201ENSMUST00000119282 4772 ntBASIC5.14□□□□□ -1.59
RaraP11416 Gm11822-201ENSMUST00000119177 415 ntBASIC5.14□□□□□ -1.59
RaraP11416 Gm12779-201ENSMUST00000121496 143 ntBASIC5.14□□□□□ -1.59
RaraP11416 Gm15213-201ENSMUST00000122098 216 ntBASIC5.14□□□□□ -1.59
RaraP11416 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC5.14□□□□□ -1.59
RaraP11416 Gm12854-201ENSMUST00000128518 297 ntBASIC5.14□□□□□ -1.59
RaraP11416 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5.14□□□□□ -1.59
RaraP11416 Gm26354-201ENSMUST00000158221 129 ntBASIC5.14□□□□□ -1.59
RaraP11416 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC5.14□□□□□ -1.59
RaraP11416 Gm17162-201ENSMUST00000168538 473 ntBASIC5.14□□□□□ -1.59
RaraP11416 Gm25360-201ENSMUST00000178786 191 ntBASIC5.14□□□□□ -1.59
RaraP11416 Mir6343-201ENSMUST00000183584 84 ntBASIC5.14□□□□□ -1.59
RaraP11416 Gm27254-201ENSMUST00000183926 517 ntBASIC5.14□□□□□ -1.59
RaraP11416 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC5.14□□□□□ -1.59
RaraP11416 Gm29484-201ENSMUST00000186067 324 ntBASIC5.14□□□□□ -1.59
RaraP11416 Gm42925-201ENSMUST00000197359 285 ntBASIC5.14□□□□□ -1.59
RaraP11416 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC5.14□□□□□ -1.59
RaraP11416 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC5.14□□□□□ -1.59
RaraP11416 Gm39197-201ENSMUST00000212069 457 ntBASIC5.14□□□□□ -1.59
RaraP11416 Gm45879-201ENSMUST00000212521 392 ntBASIC5.14□□□□□ -1.59
RaraP11416 Gm8940-201ENSMUST00000212585 219 ntBASIC5.14□□□□□ -1.59
RaraP11416 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
RaraP11416 Ear-ps9-202ENSMUST00000226796 245 ntBASIC5.14□□□□□ -1.59
RaraP11416 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RaraP11416 Gm7665-201ENSMUST00000076710 297 ntBASIC5.14□□□□□ -1.59
RaraP11416 Gm22571-201ENSMUST00000082984 70 ntBASIC5.14□□□□□ -1.59
RaraP11416 Gm22155-201ENSMUST00000083836 162 ntBASIC5.14□□□□□ -1.59
RaraP11416 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC5.14□□□□□ -1.59
RaraP11416 Dbpht2-202ENSMUST00000221311 5341 ntBASIC5.14□□□□□ -1.59
RaraP11416 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RaraP11416 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RaraP11416 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
RaraP11416 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RaraP11416 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
RaraP11416 AC164297.1-201ENSMUST00000224484 1561 ntBASIC5.13□□□□□ -1.59
RaraP11416 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RaraP11416 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RaraP11416 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RaraP11416 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
RaraP11416 Mir676-201ENSMUST00000102443 89 ntBASIC5.13□□□□□ -1.59
RaraP11416 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms