Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm28628-201ENSMUST00000187006 264 ntBASIC3.06□□□□□ -1.92
TnfP06804 Gm28629-201ENSMUST00000187309 263 ntBASIC3.06□□□□□ -1.92
TnfP06804 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TnfP06804 Gm42796-201ENSMUST00000199913 1087 ntBASIC3.06□□□□□ -1.92
TnfP06804 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.06□□□□□ -1.92
TnfP06804 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.06□□□□□ -1.92
TnfP06804 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC3.06□□□□□ -1.92
TnfP06804 AC124399.1-201ENSMUST00000218334 590 ntBASIC3.06□□□□□ -1.92
TnfP06804 Gm19233-201ENSMUST00000219772 936 ntBASIC3.06□□□□□ -1.92
TnfP06804 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.06□□□□□ -1.92
TnfP06804 AC134254.5-201ENSMUST00000223436 400 ntBASIC3.06□□□□□ -1.92
TnfP06804 AC154426.1-201ENSMUST00000225614 1132 ntBASIC3.06□□□□□ -1.92
TnfP06804 AC147545.1-201ENSMUST00000227528 108 ntBASIC3.06□□□□□ -1.92
TnfP06804 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TnfP06804 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TnfP06804 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
TnfP06804 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
TnfP06804 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
TnfP06804 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TnfP06804 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
TnfP06804 Gm42701-201ENSMUST00000196117 1657 ntBASIC3.05□□□□□ -1.92
TnfP06804 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
TnfP06804 Gm14197-201ENSMUST00000117480 1049 ntBASIC3.05□□□□□ -1.92
TnfP06804 Gm14880-201ENSMUST00000117581 292 ntBASIC3.05□□□□□ -1.92
TnfP06804 Gm25280-201ENSMUST00000157269 101 ntBASIC3.05□□□□□ -1.92
TnfP06804 Gm25341-201ENSMUST00000157461 268 ntBASIC3.05□□□□□ -1.92
TnfP06804 Gm19203-201ENSMUST00000174049 939 ntBASIC3.05□□□□□ -1.92
TnfP06804 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC3.05□□□□□ -1.92
TnfP06804 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TnfP06804 Gm27700-201ENSMUST00000185003 81 ntBASIC3.05□□□□□ -1.92
TnfP06804 Gm27505-201ENSMUST00000185071 110 ntBASIC3.05□□□□□ -1.92
TnfP06804 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.05□□□□□ -1.92
TnfP06804 Gm37081-201ENSMUST00000192034 196 ntBASIC3.05□□□□□ -1.92
TnfP06804 Gm38216-201ENSMUST00000194872 1214 ntBASIC3.05□□□□□ -1.92
TnfP06804 Gm43521-201ENSMUST00000197838 255 ntBASIC3.05□□□□□ -1.92
TnfP06804 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.05□□□□□ -1.92
TnfP06804 Gm43107-201ENSMUST00000198729 255 ntBASIC3.05□□□□□ -1.92
TnfP06804 Gm43478-201ENSMUST00000200381 292 ntBASIC3.05□□□□□ -1.92
TnfP06804 Gm44076-201ENSMUST00000203072 520 ntBASIC3.05□□□□□ -1.92
TnfP06804 AC160958.1-201ENSMUST00000224833 368 ntBASIC3.05□□□□□ -1.92
TnfP06804 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
TnfP06804 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
TnfP06804 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TnfP06804 n-R5s40-201ENSMUST00000082475 124 ntBASIC3.05□□□□□ -1.92
TnfP06804 Gm24446-201ENSMUST00000083982 156 ntBASIC3.05□□□□□ -1.92
TnfP06804 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
TnfP06804 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
TnfP06804 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TnfP06804 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
TnfP06804 Mir208b-201ENSMUST00000104735 77 ntBASIC3.04□□□□□ -1.92
TnfP06804 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC3.04□□□□□ -1.92
TnfP06804 Gm22849-201ENSMUST00000157713 307 ntBASIC3.04□□□□□ -1.92
TnfP06804 Gm22516-201ENSMUST00000158266 124 ntBASIC3.04□□□□□ -1.92
TnfP06804 Gm17117-201ENSMUST00000163665 299 ntBASIC3.04□□□□□ -1.92
TnfP06804 Gm21893-201ENSMUST00000179119 397 ntBASIC3.04□□□□□ -1.92
TnfP06804 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.04□□□□□ -1.92
TnfP06804 Gm42896-201ENSMUST00000201249 1113 ntBASIC3.04□□□□□ -1.92
TnfP06804 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC3.04□□□□□ -1.92
TnfP06804 Gm45072-201ENSMUST00000208673 929 ntBASIC3.04□□□□□ -1.92
TnfP06804 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.04□□□□□ -1.92
TnfP06804 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TnfP06804 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TnfP06804 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC3.04□□□□□ -1.92
TnfP06804 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.04□□□□□ -1.92
TnfP06804 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
TnfP06804 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
TnfP06804 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC3.03□□□□□ -1.92
TnfP06804 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
TnfP06804 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.03□□□□□ -1.92
TnfP06804 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.03□□□□□ -1.92
TnfP06804 Gm13678-201ENSMUST00000118926 340 ntBASIC3.03□□□□□ -1.92
TnfP06804 Gm12137-201ENSMUST00000119565 346 ntBASIC3.03□□□□□ -1.92
TnfP06804 Gm14253-201ENSMUST00000122112 639 ntBASIC3.03□□□□□ -1.92
TnfP06804 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC3.03□□□□□ -1.92
TnfP06804 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC3.03□□□□□ -1.92
TnfP06804 Gm24060-201ENSMUST00000157494 95 ntBASIC3.03□□□□□ -1.92
TnfP06804 Gm24691-201ENSMUST00000157762 140 ntBASIC3.03□□□□□ -1.92
TnfP06804 Gm25883-201ENSMUST00000157781 271 ntBASIC3.03□□□□□ -1.92
TnfP06804 Gm26041-201ENSMUST00000158148 108 ntBASIC3.03□□□□□ -1.92
TnfP06804 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
TnfP06804 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
TnfP06804 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.03□□□□□ -1.92
TnfP06804 Gm28011-201ENSMUST00000184097 175 ntBASIC3.03□□□□□ -1.92
TnfP06804 Gm37428-201ENSMUST00000193886 137 ntBASIC3.03□□□□□ -1.92
TnfP06804 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.03□□□□□ -1.92
TnfP06804 Gm44688-201ENSMUST00000209083 537 ntBASIC3.03□□□□□ -1.92
TnfP06804 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.03□□□□□ -1.92
TnfP06804 AC164597.2-201ENSMUST00000226738 603 ntBASIC3.03□□□□□ -1.92
TnfP06804 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
TnfP06804 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
TnfP06804 Gm25799-201ENSMUST00000082643 107 ntBASIC3.03□□□□□ -1.92
TnfP06804 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TnfP06804 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
TnfP06804 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
TnfP06804 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
TnfP06804 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
TnfP06804 Gm15854-201ENSMUST00000118879 808 ntBASIC3.02□□□□□ -1.93
TnfP06804 Gm12787-201ENSMUST00000119234 396 ntBASIC3.02□□□□□ -1.93
TnfP06804 Gm11693-201ENSMUST00000119625 565 ntBASIC3.02□□□□□ -1.93
TnfP06804 Gm14578-201ENSMUST00000122166 391 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms