Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.57□□□□□ -2
P04214 Gm23409-201ENSMUST00000158516 237 ntBASIC2.57□□□□□ -2
P04214 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
P04214 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC2.57□□□□□ -2
P04214 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.57□□□□□ -2
P04214 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC2.57□□□□□ -2
P04214 Gm43587-201ENSMUST00000199590 204 ntBASIC2.57□□□□□ -2
P04214 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.57□□□□□ -2
P04214 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC2.57□□□□□ -2
P04214 Gm18043-201ENSMUST00000216741 739 ntBASIC2.57□□□□□ -2
P04214 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC2.57□□□□□ -2
P04214 Gm46389-201ENSMUST00000223199 392 ntBASIC2.57□□□□□ -2
P04214 AC160999.1-201ENSMUST00000225675 810 ntBASIC2.57□□□□□ -2
P04214 AC144819.1-201ENSMUST00000227015 620 ntBASIC2.57□□□□□ -2
P04214 AC109172.2-201ENSMUST00000228792 381 ntBASIC2.57□□□□□ -2
P04214 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
P04214 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC2.57□□□□□ -2
P04214 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
P04214 Gm44624-201ENSMUST00000208700 2278 ntBASIC2.57□□□□□ -2
P04214 AC116557.1-201ENSMUST00000219494 1521 ntBASIC2.57□□□□□ -2
P04214 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
P04214 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
P04214 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
P04214 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.56□□□□□ -2
P04214 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
P04214 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.56□□□□□ -2
P04214 Gm25094-201ENSMUST00000103992 131 ntBASIC2.56□□□□□ -2
P04214 Gm3940-201ENSMUST00000105087 432 ntBASIC2.56□□□□□ -2
P04214 Gm14607-201ENSMUST00000119119 491 ntBASIC2.56□□□□□ -2
P04214 Gm15019-201ENSMUST00000120148 434 ntBASIC2.56□□□□□ -2
P04214 Gm22803-201ENSMUST00000158049 283 ntBASIC2.56□□□□□ -2
P04214 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC2.56□□□□□ -2
P04214 Mir7026-201ENSMUST00000184384 67 ntBASIC2.56□□□□□ -2
P04214 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC2.56□□□□□ -2
P04214 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC2.56□□□□□ -2
P04214 Trbv27-201ENSMUST00000193711 277 ntBASIC2.56□□□□□ -2
P04214 Gm43295-201ENSMUST00000201439 412 ntBASIC2.56□□□□□ -2
P04214 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC2.56□□□□□ -2
P04214 CT485608.1-201ENSMUST00000228759 389 ntBASIC2.56□□□□□ -2
P04214 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC2.56□□□□□ -2
P04214 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
P04214 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC2.56□□□□□ -2
P04214 Gm23460-201ENSMUST00000083258 109 ntBASIC2.56□□□□□ -2
P04214 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.56□□□□□ -2
P04214 Gm6207-201ENSMUST00000120075 1386 ntBASIC2.56□□□□□ -2
P04214 Gm6228-201ENSMUST00000178856 1386 ntBASIC2.56□□□□□ -2
P04214 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC2.56□□□□□ -2
P04214 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
P04214 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.55□□□□□ -2
P04214 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC2.55□□□□□ -2
P04214 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.55□□□□□ -2
P04214 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC2.55□□□□□ -2
P04214 Gm15244-201ENSMUST00000121122 130 ntBASIC2.55□□□□□ -2
P04214 Gm23600-201ENSMUST00000157260 71 ntBASIC2.55□□□□□ -2
P04214 Gm22036-201ENSMUST00000157279 215 ntBASIC2.55□□□□□ -2
P04214 Gm24061-201ENSMUST00000157489 120 ntBASIC2.55□□□□□ -2
P04214 Gm27044-201ENSMUST00000183033 796 ntBASIC2.55□□□□□ -2
P04214 Gm36997-201ENSMUST00000195090 707 ntBASIC2.55□□□□□ -2
P04214 Gm43512-201ENSMUST00000198495 176 ntBASIC2.55□□□□□ -2
P04214 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
P04214 AC153899.1-201ENSMUST00000214092 1117 ntBASIC2.55□□□□□ -2
P04214 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
P04214 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.55□□□□□ -2
P04214 AC118639.1-201ENSMUST00000227204 338 ntBASIC2.55□□□□□ -2
P04214 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.55□□□□□ -2
P04214 Gm10794-201ENSMUST00000099624 207 ntBASIC2.55□□□□□ -2
P04214 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.54□□□□□ -2
P04214 Gm24096-201ENSMUST00000103905 110 ntBASIC2.54□□□□□ -2
P04214 Gm13439-201ENSMUST00000117541 409 ntBASIC2.54□□□□□ -2
P04214 Gm9850-201ENSMUST00000117916 227 ntBASIC2.54□□□□□ -2
P04214 Gm23183-201ENSMUST00000122595 323 ntBASIC2.54□□□□□ -2
P04214 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
P04214 Gm16355-201ENSMUST00000128606 231 ntBASIC2.54□□□□□ -2
P04214 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC2.54□□□□□ -2
P04214 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC2.54□□□□□ -2
P04214 Gm26277-201ENSMUST00000157097 152 ntBASIC2.54□□□□□ -2
P04214 Fth-ps2-201ENSMUST00000168364 516 ntBASIC2.54□□□□□ -2
P04214 Gm9613-201ENSMUST00000171662 196 ntBASIC2.54□□□□□ -2
P04214 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC2.54□□□□□ -2
P04214 Gm22646-201ENSMUST00000175130 115 ntBASIC2.54□□□□□ -2
P04214 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC2.54□□□□□ -2
P04214 Gm3852-201ENSMUST00000182781 264 ntBASIC2.54□□□□□ -2
P04214 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC2.54□□□□□ -2
P04214 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC2.54□□□□□ -2
P04214 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC2.54□□□□□ -2
P04214 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC2.54□□□□□ -2
P04214 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC2.54□□□□□ -2
P04214 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC2.54□□□□□ -2
P04214 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC2.54□□□□□ -2
P04214 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC2.54□□□□□ -2
P04214 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC2.54□□□□□ -2
P04214 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC2.54□□□□□ -2
P04214 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC2.54□□□□□ -2
P04214 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC2.54□□□□□ -2
P04214 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC2.54□□□□□ -2
P04214 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC2.54□□□□□ -2
P04214 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC2.54□□□□□ -2
P04214 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC2.54□□□□□ -2
P04214 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC2.54□□□□□ -2
P04214 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms