Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 AA413626-201ENSMUST00000121125 494 ntBASIC4.22□□□□□ -1.73
Best1O88870 Gm11384-201ENSMUST00000121376 303 ntBASIC4.22□□□□□ -1.73
Best1O88870 Gm8880-201ENSMUST00000121800 454 ntBASIC4.22□□□□□ -1.73
Best1O88870 Gm14413-201ENSMUST00000122158 408 ntBASIC4.22□□□□□ -1.73
Best1O88870 Gm8200-201ENSMUST00000122390 222 ntBASIC4.22□□□□□ -1.73
Best1O88870 Gm22452-201ENSMUST00000122804 104 ntBASIC4.22□□□□□ -1.73
Best1O88870 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Best1O88870 Gm16354-201ENSMUST00000155376 150 ntBASIC4.22□□□□□ -1.73
Best1O88870 Gm25283-201ENSMUST00000157272 77 ntBASIC4.22□□□□□ -1.73
Best1O88870 Gm23068-201ENSMUST00000158239 293 ntBASIC4.22□□□□□ -1.73
Best1O88870 Gm25902-201ENSMUST00000158493 318 ntBASIC4.22□□□□□ -1.73
Best1O88870 Gm24546-201ENSMUST00000158652 102 ntBASIC4.22□□□□□ -1.73
Best1O88870 Gm24636-201ENSMUST00000158673 288 ntBASIC4.22□□□□□ -1.73
Best1O88870 Gm5258-201ENSMUST00000165437 327 ntBASIC4.22□□□□□ -1.73
Best1O88870 Snord116l14-201ENSMUST00000179875 94 ntBASIC4.22□□□□□ -1.73
Best1O88870 Gm7656-201ENSMUST00000182468 1004 ntBASIC4.22□□□□□ -1.73
Best1O88870 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Best1O88870 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Best1O88870 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC4.22□□□□□ -1.73
Best1O88870 Gm29479-201ENSMUST00000190352 455 ntBASIC4.22□□□□□ -1.73
Best1O88870 Gm38332-201ENSMUST00000194189 147 ntBASIC4.22□□□□□ -1.73
Best1O88870 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC4.22□□□□□ -1.73
Best1O88870 Gm44946-201ENSMUST00000208425 572 ntBASIC4.22□□□□□ -1.73
Best1O88870 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC4.22□□□□□ -1.73
Best1O88870 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC4.22□□□□□ -1.73
Best1O88870 Gm45588-201ENSMUST00000211213 630 ntBASIC4.22□□□□□ -1.73
Best1O88870 AC109214.2-201ENSMUST00000220089 358 ntBASIC4.22□□□□□ -1.73
Best1O88870 AC115750.1-201ENSMUST00000220441 567 ntBASIC4.22□□□□□ -1.73
Best1O88870 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.22□□□□□ -1.73
Best1O88870 AC154276.2-201ENSMUST00000227707 309 ntBASIC4.22□□□□□ -1.73
Best1O88870 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Best1O88870 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Best1O88870 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Best1O88870 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Best1O88870 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Best1O88870 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Best1O88870 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Best1O88870 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Best1O88870 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Best1O88870 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.73
Best1O88870 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Best1O88870 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Best1O88870 AC121598.3-201ENSMUST00000227179 1643 ntBASIC4.21□□□□□ -1.73
Best1O88870 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Best1O88870 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.73
Best1O88870 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC4.21□□□□□ -1.74
Best1O88870 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
Best1O88870 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Best1O88870 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.21□□□□□ -1.74
Best1O88870 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Best1O88870 Gm11874-201ENSMUST00000117437 130 ntBASIC4.21□□□□□ -1.74
Best1O88870 Gm14172-201ENSMUST00000118255 644 ntBASIC4.21□□□□□ -1.74
Best1O88870 Gm14352-201ENSMUST00000119250 449 ntBASIC4.21□□□□□ -1.74
Best1O88870 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Best1O88870 Gm15244-201ENSMUST00000121122 130 ntBASIC4.21□□□□□ -1.74
Best1O88870 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Best1O88870 Gm23905-201ENSMUST00000157568 109 ntBASIC4.21□□□□□ -1.74
Best1O88870 Gm22521-201ENSMUST00000158272 134 ntBASIC4.21□□□□□ -1.74
Best1O88870 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC4.21□□□□□ -1.74
Best1O88870 Gm26968-201ENSMUST00000182894 481 ntBASIC4.21□□□□□ -1.74
Best1O88870 Mir6537-201ENSMUST00000184150 110 ntBASIC4.21□□□□□ -1.74
Best1O88870 Mir6899-201ENSMUST00000184798 64 ntBASIC4.21□□□□□ -1.74
Best1O88870 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC4.21□□□□□ -1.74
Best1O88870 Gm38270-201ENSMUST00000192721 407 ntBASIC4.21□□□□□ -1.74
Best1O88870 Gm9023-201ENSMUST00000198408 1038 ntBASIC4.21□□□□□ -1.74
Best1O88870 Gm44041-201ENSMUST00000203678 396 ntBASIC4.21□□□□□ -1.74
Best1O88870 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC4.21□□□□□ -1.74
Best1O88870 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC4.21□□□□□ -1.74
Best1O88870 Gm45860-201ENSMUST00000212700 334 ntBASIC4.21□□□□□ -1.74
Best1O88870 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC4.21□□□□□ -1.74
Best1O88870 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.21□□□□□ -1.74
Best1O88870 AC154305.1-201ENSMUST00000224443 450 ntBASIC4.21□□□□□ -1.74
Best1O88870 AC167192.2-201ENSMUST00000224794 198 ntBASIC4.21□□□□□ -1.74
Best1O88870 AC116656.1-201ENSMUST00000227040 755 ntBASIC4.21□□□□□ -1.74
Best1O88870 Mir26a-2-201ENSMUST00000083496 84 ntBASIC4.21□□□□□ -1.74
Best1O88870 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Best1O88870 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Best1O88870 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Best1O88870 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Best1O88870 AC142245.1-201ENSMUST00000226611 1505 ntBASIC4.21□□□□□ -1.74
Best1O88870 Gm44742-201ENSMUST00000207190 1412 ntBASIC4.21□□□□□ -1.74
Best1O88870 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Best1O88870 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC4.2□□□□□ -1.74
Best1O88870 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Best1O88870 Gm3683-201ENSMUST00000175701 2513 ntBASIC4.2□□□□□ -1.74
Best1O88870 Mir669o-201ENSMUST00000103898 96 ntBASIC4.2□□□□□ -1.74
Best1O88870 Gm24788-201ENSMUST00000104283 156 ntBASIC4.2□□□□□ -1.74
Best1O88870 Gm22493-201ENSMUST00000104494 132 ntBASIC4.2□□□□□ -1.74
Best1O88870 Snora64-201ENSMUST00000104521 134 ntBASIC4.2□□□□□ -1.74
Best1O88870 Gm12878-201ENSMUST00000118744 332 ntBASIC4.2□□□□□ -1.74
Best1O88870 Gm16428-201ENSMUST00000121193 723 ntBASIC4.2□□□□□ -1.74
Best1O88870 Gm22453-201ENSMUST00000122801 318 ntBASIC4.2□□□□□ -1.74
Best1O88870 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Best1O88870 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC4.2□□□□□ -1.74
Best1O88870 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Best1O88870 Gm25908-201ENSMUST00000157624 98 ntBASIC4.2□□□□□ -1.74
Best1O88870 Gm22516-201ENSMUST00000158266 124 ntBASIC4.2□□□□□ -1.74
Best1O88870 Cfap61-214ENSMUST00000167179 183 ntBASIC4.2□□□□□ -1.74
Best1O88870 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Best1O88870 Gm8221-201ENSMUST00000178052 564 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms