Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Gm19726-201ENSMUST00000205008 240 ntBASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 AC118639.1-201ENSMUST00000227204 338 ntBASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Gm24150-201ENSMUST00000082759 104 ntBASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Trav13d-3J3QMG8 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 AC167192.3-201ENSMUST00000224096 1567 ntBASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Gm18594-201ENSMUST00000175733 1403 ntBASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Gm11813-201ENSMUST00000118586 291 ntBASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Gm8757-201ENSMUST00000119660 372 ntBASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Gm7363-201ENSMUST00000119883 399 ntBASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Gm22480-201ENSMUST00000122568 128 ntBASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Gm25052-201ENSMUST00000122661 158 ntBASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Gm22555-201ENSMUST00000157801 62 ntBASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Gm23257-201ENSMUST00000158322 132 ntBASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Gm22076-201ENSMUST00000158601 84 ntBASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Gm10357-201ENSMUST00000159886 264 ntBASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Gm11392-201ENSMUST00000181419 710 ntBASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Mir6382-201ENSMUST00000184055 110 ntBASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Gm6651-201ENSMUST00000189471 271 ntBASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Gm37343-201ENSMUST00000192542 111 ntBASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Gm36984-201ENSMUST00000192770 235 ntBASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Gm44181-201ENSMUST00000203106 483 ntBASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Gm44295-201ENSMUST00000203805 437 ntBASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Gm44475-201ENSMUST00000204041 424 ntBASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Gm45023-201ENSMUST00000207951 379 ntBASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Gm9068-201ENSMUST00000217393 455 ntBASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 AC112274.2-201ENSMUST00000218436 170 ntBASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 AC156790.5-201ENSMUST00000227075 231 ntBASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Mir19a-201ENSMUST00000083482 82 ntBASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Trav13d-3J3QMG8 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.21□□□□□ -1.89
Trav13d-3J3QMG8 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
Trav13d-3J3QMG8 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.21□□□□□ -1.9
Trav13d-3J3QMG8 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
Trav13d-3J3QMG8 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Trav13d-3J3QMG8 Gm43658-201ENSMUST00000202348 4176 ntBASIC3.21□□□□□ -1.9
Trav13d-3J3QMG8 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Trav13d-3J3QMG8 Gm14890-201ENSMUST00000117660 676 ntBASIC3.21□□□□□ -1.9
Trav13d-3J3QMG8 Gm14352-201ENSMUST00000119250 449 ntBASIC3.21□□□□□ -1.9
Trav13d-3J3QMG8 Gm14875-201ENSMUST00000120881 319 ntBASIC3.21□□□□□ -1.9
Trav13d-3J3QMG8 Gm13406-201ENSMUST00000121991 256 ntBASIC3.21□□□□□ -1.9
Trav13d-3J3QMG8 Gm15147-201ENSMUST00000122263 483 ntBASIC3.21□□□□□ -1.9
Trav13d-3J3QMG8 Nron-204ENSMUST00000158971 370 ntBASIC3.21□□□□□ -1.9
Trav13d-3J3QMG8 Gm27903-201ENSMUST00000175482 126 ntBASIC3.21□□□□□ -1.9
Trav13d-3J3QMG8 Gm24925-201ENSMUST00000178157 107 ntBASIC3.21□□□□□ -1.9
Trav13d-3J3QMG8 Gm26991-201ENSMUST00000180950 620 ntBASIC3.21□□□□□ -1.9
Trav13d-3J3QMG8 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.21□□□□□ -1.9
Trav13d-3J3QMG8 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Trav13d-3J3QMG8 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC3.21□□□□□ -1.9
Trav13d-3J3QMG8 Gm28594-201ENSMUST00000187022 661 ntBASIC3.21□□□□□ -1.9
Trav13d-3J3QMG8 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Trav13d-3J3QMG8 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.21□□□□□ -1.9
Trav13d-3J3QMG8 Gm17781-201ENSMUST00000195232 649 ntBASIC3.21□□□□□ -1.9
Trav13d-3J3QMG8 Gm43814-201ENSMUST00000197851 413 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms