Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Trav13d-4A0A0G2JFX3 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
Trav13d-4A0A0G2JFX3 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Trav13d-4A0A0G2JFX3 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Trav13d-4A0A0G2JFX3 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Trav13d-4A0A0G2JFX3 Hm629797-201ENSMUST00000183645 2398 ntBASIC3.09□□□□□ -1.91
Trav13d-4A0A0G2JFX3 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
Trav13d-4A0A0G2JFX3 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC3.09□□□□□ -1.91
Trav13d-4A0A0G2JFX3 Gm15807-201ENSMUST00000119880 1128 ntBASIC3.09□□□□□ -1.91
Trav13d-4A0A0G2JFX3 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC3.09□□□□□ -1.91
Trav13d-4A0A0G2JFX3 Gm14037-201ENSMUST00000120576 313 ntBASIC3.09□□□□□ -1.91
Trav13d-4A0A0G2JFX3 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC3.09□□□□□ -1.91
Trav13d-4A0A0G2JFX3 Gm26153-201ENSMUST00000157433 127 ntBASIC3.09□□□□□ -1.91
Trav13d-4A0A0G2JFX3 Gm22968-201ENSMUST00000157955 118 ntBASIC3.09□□□□□ -1.91
Trav13d-4A0A0G2JFX3 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC3.09□□□□□ -1.91
Trav13d-4A0A0G2JFX3 Gm20450-201ENSMUST00000173652 147 ntBASIC3.09□□□□□ -1.91
Trav13d-4A0A0G2JFX3 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Trav13d-4A0A0G2JFX3 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Trav13d-4A0A0G2JFX3 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Trav13d-4A0A0G2JFX3 Gm27551-201ENSMUST00000184258 77 ntBASIC3.09□□□□□ -1.91
Trav13d-4A0A0G2JFX3 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Trav13d-4A0A0G2JFX3 Vmn1r82-202ENSMUST00000191002 918 ntBASIC3.09□□□□□ -1.91
Trav13d-4A0A0G2JFX3 Gm37353-201ENSMUST00000194497 313 ntBASIC3.09□□□□□ -1.91
Trav13d-4A0A0G2JFX3 Ighv12-1-201ENSMUST00000195542 329 ntBASIC3.09□□□□□ -1.91
Trav13d-4A0A0G2JFX3 Gm29704-201ENSMUST00000196011 253 ntBASIC3.09□□□□□ -1.91
Trav13d-4A0A0G2JFX3 Gm44266-201ENSMUST00000205235 500 ntBASIC3.09□□□□□ -1.91
Trav13d-4A0A0G2JFX3 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC3.09□□□□□ -1.91
Trav13d-4A0A0G2JFX3 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Trav13d-4A0A0G2JFX3 AC147101.1-201ENSMUST00000217964 312 ntBASIC3.09□□□□□ -1.91
Trav13d-4A0A0G2JFX3 Gm19256-201ENSMUST00000218550 231 ntBASIC3.09□□□□□ -1.91
Trav13d-4A0A0G2JFX3 Gm16419-201ENSMUST00000221057 625 ntBASIC3.09□□□□□ -1.91
Trav13d-4A0A0G2JFX3 AC159203.2-201ENSMUST00000221326 193 ntBASIC3.09□□□□□ -1.91
Trav13d-4A0A0G2JFX3 AC166574.7-201ENSMUST00000228502 704 ntBASIC3.09□□□□□ -1.91
Trav13d-4A0A0G2JFX3 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.09□□□□□ -1.91
Trav13d-4A0A0G2JFX3 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Trav13d-4A0A0G2JFX3 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC3.09□□□□□ -1.91
Trav13d-4A0A0G2JFX3 Gm24525-201ENSMUST00000082917 151 ntBASIC3.09□□□□□ -1.91
Trav13d-4A0A0G2JFX3 Gm23850-201ENSMUST00000083830 169 ntBASIC3.09□□□□□ -1.91
Trav13d-4A0A0G2JFX3 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
Trav13d-4A0A0G2JFX3 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Trav13d-4A0A0G2JFX3 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.09□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Gm45131-201ENSMUST00000208051 2582 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Gm24124-201ENSMUST00000104103 132 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Gm23709-201ENSMUST00000104364 130 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Gm13343-201ENSMUST00000116474 105 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Gm12125-201ENSMUST00000117261 736 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Gm15175-201ENSMUST00000117629 132 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Gm13386-201ENSMUST00000117677 124 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Gm13887-201ENSMUST00000119009 344 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Gm5379-201ENSMUST00000120973 826 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Gm25103-201ENSMUST00000122671 318 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Gm23250-201ENSMUST00000157444 267 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Gm24720-201ENSMUST00000157518 166 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Gm26373-201ENSMUST00000157833 103 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Gm25447-201ENSMUST00000158997 128 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Gm17044-201ENSMUST00000168549 828 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Gm3104-201ENSMUST00000171004 473 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Gm27543-201ENSMUST00000183562 177 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Gm27520-201ENSMUST00000184872 81 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Gm37290-201ENSMUST00000195775 339 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Gm44726-201ENSMUST00000203427 217 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Gm34783-201ENSMUST00000209159 303 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Gm3816-201ENSMUST00000209803 433 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Gm18258-201ENSMUST00000210413 542 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Gm45252-201ENSMUST00000211579 397 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Gm18789-201ENSMUST00000216115 550 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 AC124346.1-201ENSMUST00000218539 364 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Gm40692-201ENSMUST00000220411 491 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Gm30155-201ENSMUST00000223458 339 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 AC154245.1-201ENSMUST00000224615 601 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 AC158392.2-201ENSMUST00000225402 969 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 AC117656.1-201ENSMUST00000225826 339 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 AC154626.1-201ENSMUST00000226070 311 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 AC115735.3-201ENSMUST00000227757 513 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 AC164437.2-201ENSMUST00000228915 797 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Gm26163-201ENSMUST00000083792 178 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Olfr895-201ENSMUST00000093864 951 ntBASIC3.08□□□□□ -1.92
Trav13d-4A0A0G2JFX3 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms