Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
Cldn3Q9Z0G9 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC3.24□□□□□ -1.89
Cldn3Q9Z0G9 Gm24831-201ENSMUST00000116778 126 ntBASIC3.24□□□□□ -1.89
Cldn3Q9Z0G9 Gm7974-201ENSMUST00000117154 408 ntBASIC3.24□□□□□ -1.89
Cldn3Q9Z0G9 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.24□□□□□ -1.89
Cldn3Q9Z0G9 Gm14880-201ENSMUST00000117581 292 ntBASIC3.24□□□□□ -1.89
Cldn3Q9Z0G9 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.24□□□□□ -1.89
Cldn3Q9Z0G9 Gm26020-201ENSMUST00000122729 183 ntBASIC3.24□□□□□ -1.89
Cldn3Q9Z0G9 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC3.24□□□□□ -1.89
Cldn3Q9Z0G9 Gm23667-201ENSMUST00000157466 120 ntBASIC3.24□□□□□ -1.89
Cldn3Q9Z0G9 Gm25883-201ENSMUST00000157781 271 ntBASIC3.24□□□□□ -1.89
Cldn3Q9Z0G9 Gm23028-201ENSMUST00000158773 265 ntBASIC3.24□□□□□ -1.89
Cldn3Q9Z0G9 Gm28002-201ENSMUST00000184832 100 ntBASIC3.24□□□□□ -1.89
Cldn3Q9Z0G9 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.24□□□□□ -1.89
Cldn3Q9Z0G9 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Cldn3Q9Z0G9 Gm28926-201ENSMUST00000191063 680 ntBASIC3.24□□□□□ -1.89
Cldn3Q9Z0G9 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.24□□□□□ -1.89
Cldn3Q9Z0G9 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.24□□□□□ -1.89
Cldn3Q9Z0G9 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Cldn3Q9Z0G9 Gm45382-201ENSMUST00000210607 151 ntBASIC3.24□□□□□ -1.89
Cldn3Q9Z0G9 Gm45814-201ENSMUST00000212646 775 ntBASIC3.24□□□□□ -1.89
Cldn3Q9Z0G9 AC127302.1-201ENSMUST00000215973 1111 ntBASIC3.24□□□□□ -1.89
Cldn3Q9Z0G9 Gm9973-202ENSMUST00000220926 166 ntBASIC3.24□□□□□ -1.89
Cldn3Q9Z0G9 Gm2544-201ENSMUST00000222702 756 ntBASIC3.24□□□□□ -1.89
Cldn3Q9Z0G9 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Cldn3Q9Z0G9 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Cldn3Q9Z0G9 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Cldn3Q9Z0G9 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC3.24□□□□□ -1.89
Cldn3Q9Z0G9 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
Cldn3Q9Z0G9 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Cldn3Q9Z0G9 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Cldn3Q9Z0G9 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.24□□□□□ -1.89
Cldn3Q9Z0G9 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 Gm15110-201ENSMUST00000117545 881 ntBASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 Gm6274-201ENSMUST00000118173 797 ntBASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 Gm14008-201ENSMUST00000120483 274 ntBASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 Snrpert-201ENSMUST00000121967 279 ntBASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 Gm22956-201ENSMUST00000122520 80 ntBASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 Gm22561-201ENSMUST00000157331 84 ntBASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 Gm25341-201ENSMUST00000157461 268 ntBASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 Gm26866-201ENSMUST00000180414 802 ntBASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 Gm43070-201ENSMUST00000196938 415 ntBASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 Amd-ps5-201ENSMUST00000198406 989 ntBASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 Gm19253-201ENSMUST00000204279 307 ntBASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 Gm18903-201ENSMUST00000215343 480 ntBASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 AC152946.2-201ENSMUST00000219071 337 ntBASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 Gm9628-201ENSMUST00000222169 725 ntBASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 CT030184.1-201ENSMUST00000222393 416 ntBASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC3.23□□□□□ -1.89
Cldn3Q9Z0G9 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Cldn3Q9Z0G9 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Cldn3Q9Z0G9 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Cldn3Q9Z0G9 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Cldn3Q9Z0G9 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Cldn3Q9Z0G9 Gm25560-201ENSMUST00000104606 176 ntBASIC3.22□□□□□ -1.89
Cldn3Q9Z0G9 Gm13761-201ENSMUST00000117238 807 ntBASIC3.22□□□□□ -1.89
Cldn3Q9Z0G9 Gm12509-201ENSMUST00000118033 609 ntBASIC3.22□□□□□ -1.89
Cldn3Q9Z0G9 Gm13678-201ENSMUST00000118926 340 ntBASIC3.22□□□□□ -1.89
Cldn3Q9Z0G9 Gm14731-201ENSMUST00000119216 376 ntBASIC3.22□□□□□ -1.89
Cldn3Q9Z0G9 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.22□□□□□ -1.89
Cldn3Q9Z0G9 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC3.22□□□□□ -1.89
Cldn3Q9Z0G9 Gm24720-201ENSMUST00000157518 166 ntBASIC3.22□□□□□ -1.89
Cldn3Q9Z0G9 Gm7346-201ENSMUST00000169661 476 ntBASIC3.22□□□□□ -1.89
Cldn3Q9Z0G9 Gm22307-201ENSMUST00000180019 107 ntBASIC3.22□□□□□ -1.89
Cldn3Q9Z0G9 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.22□□□□□ -1.89
Cldn3Q9Z0G9 Mir6408-201ENSMUST00000183643 91 ntBASIC3.22□□□□□ -1.89
Cldn3Q9Z0G9 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Cldn3Q9Z0G9 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Cldn3Q9Z0G9 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Cldn3Q9Z0G9 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Cldn3Q9Z0G9 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Cldn3Q9Z0G9 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Cldn3Q9Z0G9 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Cldn3Q9Z0G9 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Cldn3Q9Z0G9 Gm29299-201ENSMUST00000185609 923 ntBASIC3.22□□□□□ -1.89
Cldn3Q9Z0G9 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Cldn3Q9Z0G9 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Cldn3Q9Z0G9 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms