Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Prpf40aQ9R1C7 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Prpf40aQ9R1C7 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Prpf40aQ9R1C7 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Prpf40aQ9R1C7 Gm45324-201ENSMUST00000211193 5638 ntBASIC5.56□□□□□ -1.52
Prpf40aQ9R1C7 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
Prpf40aQ9R1C7 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Prpf40aQ9R1C7 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Prpf40aQ9R1C7 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC5.55□□□□□ -1.52
Prpf40aQ9R1C7 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Prpf40aQ9R1C7 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Prpf40aQ9R1C7 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Prpf40aQ9R1C7 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Prpf40aQ9R1C7 Gm23274-201ENSMUST00000104056 130 ntBASIC5.55□□□□□ -1.52
Prpf40aQ9R1C7 Gm11912-201ENSMUST00000117235 264 ntBASIC5.55□□□□□ -1.52
Prpf40aQ9R1C7 Gm13172-201ENSMUST00000118685 256 ntBASIC5.55□□□□□ -1.52
Prpf40aQ9R1C7 Gm15212-201ENSMUST00000122403 466 ntBASIC5.55□□□□□ -1.52
Prpf40aQ9R1C7 Gm25293-201ENSMUST00000122792 285 ntBASIC5.55□□□□□ -1.52
Prpf40aQ9R1C7 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC5.55□□□□□ -1.52
Prpf40aQ9R1C7 Gm27926-201ENSMUST00000157180 66 ntBASIC5.55□□□□□ -1.52
Prpf40aQ9R1C7 Gm23557-201ENSMUST00000157820 138 ntBASIC5.55□□□□□ -1.52
Prpf40aQ9R1C7 Gm22389-201ENSMUST00000158193 301 ntBASIC5.55□□□□□ -1.52
Prpf40aQ9R1C7 Gm25907-201ENSMUST00000158486 125 ntBASIC5.55□□□□□ -1.52
Prpf40aQ9R1C7 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC5.55□□□□□ -1.52
Prpf40aQ9R1C7 Gm44822-201ENSMUST00000208559 6389 ntBASIC5.55□□□□□ -1.52
Prpf40aQ9R1C7 Gm33601-201ENSMUST00000210001 961 ntBASIC5.55□□□□□ -1.52
Prpf40aQ9R1C7 AC151971.3-201ENSMUST00000214694 404 ntBASIC5.55□□□□□ -1.52
Prpf40aQ9R1C7 Gm24706-201ENSMUST00000082806 137 ntBASIC5.55□□□□□ -1.52
Prpf40aQ9R1C7 Gm25187-201ENSMUST00000083906 133 ntBASIC5.55□□□□□ -1.52
Prpf40aQ9R1C7 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Prpf40aQ9R1C7 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.55□□□□□ -1.52
Prpf40aQ9R1C7 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Prpf40aQ9R1C7 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Prpf40aQ9R1C7 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC5.55□□□□□ -1.52
Prpf40aQ9R1C7 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Prpf40aQ9R1C7 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Prpf40aQ9R1C7 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Prpf40aQ9R1C7 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Prpf40aQ9R1C7 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Prpf40aQ9R1C7 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Prpf40aQ9R1C7 Gm38125-201ENSMUST00000194136 3438 ntBASIC5.55□□□□□ -1.52
Prpf40aQ9R1C7 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Prpf40aQ9R1C7 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Prpf40aQ9R1C7 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Prpf40aQ9R1C7 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Prpf40aQ9R1C7 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Prpf40aQ9R1C7 Gm37363-201ENSMUST00000192336 2233 ntBASIC5.54□□□□□ -1.52
Prpf40aQ9R1C7 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Prpf40aQ9R1C7 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
Prpf40aQ9R1C7 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Prpf40aQ9R1C7 Gm13550-201ENSMUST00000118185 525 ntBASIC5.54□□□□□ -1.52
Prpf40aQ9R1C7 Gm14940-201ENSMUST00000119309 495 ntBASIC5.54□□□□□ -1.52
Prpf40aQ9R1C7 Gm15022-201ENSMUST00000122074 746 ntBASIC5.54□□□□□ -1.52
Prpf40aQ9R1C7 Gm24914-201ENSMUST00000157285 313 ntBASIC5.54□□□□□ -1.52
Prpf40aQ9R1C7 Gm26041-201ENSMUST00000158148 108 ntBASIC5.54□□□□□ -1.52
Prpf40aQ9R1C7 Gm17065-201ENSMUST00000165245 239 ntBASIC5.54□□□□□ -1.52
Prpf40aQ9R1C7 Gm24949-201ENSMUST00000183609 215 ntBASIC5.54□□□□□ -1.52
Prpf40aQ9R1C7 Mir195b-201ENSMUST00000184814 97 ntBASIC5.54□□□□□ -1.52
Prpf40aQ9R1C7 Gm28468-201ENSMUST00000188536 615 ntBASIC5.54□□□□□ -1.52
Prpf40aQ9R1C7 Gm29454-201ENSMUST00000190805 393 ntBASIC5.54□□□□□ -1.52
Prpf40aQ9R1C7 Gm37801-201ENSMUST00000194754 274 ntBASIC5.54□□□□□ -1.52
Prpf40aQ9R1C7 Mirlet7e-201ENSMUST00000196737 93 ntBASIC5.54□□□□□ -1.52
Prpf40aQ9R1C7 Gm43284-201ENSMUST00000200103 253 ntBASIC5.54□□□□□ -1.52
Prpf40aQ9R1C7 Gm7825-201ENSMUST00000204046 416 ntBASIC5.54□□□□□ -1.52
Prpf40aQ9R1C7 Gm45660-201ENSMUST00000210267 151 ntBASIC5.54□□□□□ -1.52
Prpf40aQ9R1C7 AC157515.1-201ENSMUST00000220953 450 ntBASIC5.54□□□□□ -1.52
Prpf40aQ9R1C7 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC5.54□□□□□ -1.52
Prpf40aQ9R1C7 CT030238.1-201ENSMUST00000228393 442 ntBASIC5.54□□□□□ -1.52
Prpf40aQ9R1C7 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Prpf40aQ9R1C7 Gm23932-201ENSMUST00000082914 107 ntBASIC5.54□□□□□ -1.52
Prpf40aQ9R1C7 Mir337-201ENSMUST00000083592 97 ntBASIC5.54□□□□□ -1.52
Prpf40aQ9R1C7 Gm43326-201ENSMUST00000198459 1638 ntBASIC5.54□□□□□ -1.52
Prpf40aQ9R1C7 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC5.54□□□□□ -1.52
Prpf40aQ9R1C7 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Prpf40aQ9R1C7 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Prpf40aQ9R1C7 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Prpf40aQ9R1C7 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Prpf40aQ9R1C7 AC151734.1-201ENSMUST00000227023 1740 ntBASIC5.54□□□□□ -1.52
Prpf40aQ9R1C7 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Prpf40aQ9R1C7 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Prpf40aQ9R1C7 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Prpf40aQ9R1C7 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Prpf40aQ9R1C7 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Prpf40aQ9R1C7 Gm23142-201ENSMUST00000101848 105 ntBASIC5.53□□□□□ -1.52
Prpf40aQ9R1C7 Gm26240-201ENSMUST00000101893 105 ntBASIC5.53□□□□□ -1.52
Prpf40aQ9R1C7 Gm11935-201ENSMUST00000118608 399 ntBASIC5.53□□□□□ -1.52
Prpf40aQ9R1C7 Gm23965-201ENSMUST00000157969 142 ntBASIC5.53□□□□□ -1.52
Prpf40aQ9R1C7 Gm23759-201ENSMUST00000158351 268 ntBASIC5.53□□□□□ -1.52
Prpf40aQ9R1C7 Gm25906-201ENSMUST00000158489 126 ntBASIC5.53□□□□□ -1.52
Prpf40aQ9R1C7 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Prpf40aQ9R1C7 Gm27997-201ENSMUST00000184942 69 ntBASIC5.53□□□□□ -1.52
Prpf40aQ9R1C7 Gm28744-201ENSMUST00000189939 340 ntBASIC5.53□□□□□ -1.52
Prpf40aQ9R1C7 Gm18384-201ENSMUST00000195974 808 ntBASIC5.53□□□□□ -1.52
Prpf40aQ9R1C7 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Prpf40aQ9R1C7 Gm42459-201ENSMUST00000199679 742 ntBASIC5.53□□□□□ -1.52
Prpf40aQ9R1C7 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Prpf40aQ9R1C7 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC5.53□□□□□ -1.52
Prpf40aQ9R1C7 Gm23650-201ENSMUST00000083355 70 ntBASIC5.53□□□□□ -1.52
Prpf40aQ9R1C7 Mir188-201ENSMUST00000083464 68 ntBASIC5.53□□□□□ -1.52
Prpf40aQ9R1C7 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms