Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm43923-201ENSMUST00000203992 2911 ntBASIC4.84□□□□□ -1.63
Trim39Q9ESN2 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
Trim39Q9ESN2 Gm7988-201ENSMUST00000196623 2297 ntBASIC4.84□□□□□ -1.63
Trim39Q9ESN2 Gm43200-201ENSMUST00000200385 2161 ntBASIC4.84□□□□□ -1.63
Trim39Q9ESN2 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Trim39Q9ESN2 Gm19666-201ENSMUST00000198176 1893 ntBASIC4.84□□□□□ -1.63
Trim39Q9ESN2 Gm25879-201ENSMUST00000104330 107 ntBASIC4.84□□□□□ -1.63
Trim39Q9ESN2 Gm14559-201ENSMUST00000121745 496 ntBASIC4.84□□□□□ -1.63
Trim39Q9ESN2 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Trim39Q9ESN2 Gm4916-201ENSMUST00000126139 642 ntBASIC4.84□□□□□ -1.63
Trim39Q9ESN2 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Trim39Q9ESN2 Gm25861-201ENSMUST00000158251 109 ntBASIC4.84□□□□□ -1.63
Trim39Q9ESN2 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Trim39Q9ESN2 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC4.84□□□□□ -1.63
Trim39Q9ESN2 Gm24085-201ENSMUST00000175172 116 ntBASIC4.84□□□□□ -1.63
Trim39Q9ESN2 Gm24862-201ENSMUST00000179103 79 ntBASIC4.84□□□□□ -1.63
Trim39Q9ESN2 Gm23310-201ENSMUST00000179105 79 ntBASIC4.84□□□□□ -1.63
Trim39Q9ESN2 Gm25461-201ENSMUST00000179293 79 ntBASIC4.84□□□□□ -1.63
Trim39Q9ESN2 Gm27585-201ENSMUST00000183717 199 ntBASIC4.84□□□□□ -1.63
Trim39Q9ESN2 Mir6973b-201ENSMUST00000184185 80 ntBASIC4.84□□□□□ -1.63
Trim39Q9ESN2 Gm44092-201ENSMUST00000204470 258 ntBASIC4.84□□□□□ -1.63
Trim39Q9ESN2 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Trim39Q9ESN2 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC4.84□□□□□ -1.63
Trim39Q9ESN2 AC153864.2-201ENSMUST00000220424 292 ntBASIC4.84□□□□□ -1.63
Trim39Q9ESN2 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC4.84□□□□□ -1.63
Trim39Q9ESN2 AC125543.4-201ENSMUST00000223385 117 ntBASIC4.84□□□□□ -1.63
Trim39Q9ESN2 Gm10064-201ENSMUST00000071235 399 ntBASIC4.84□□□□□ -1.63
Trim39Q9ESN2 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Trim39Q9ESN2 Mir331-201ENSMUST00000083673 96 ntBASIC4.84□□□□□ -1.63
Trim39Q9ESN2 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.84□□□□□ -1.63
Trim39Q9ESN2 Gm42436-201ENSMUST00000198804 3656 ntBASIC4.84□□□□□ -1.63
Trim39Q9ESN2 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Trim39Q9ESN2 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
Trim39Q9ESN2 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Trim39Q9ESN2 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.84□□□□□ -1.64
Trim39Q9ESN2 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC4.84□□□□□ -1.64
Trim39Q9ESN2 Gm44433-201ENSMUST00000203540 4832 ntBASIC4.84□□□□□ -1.64
Trim39Q9ESN2 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Trim39Q9ESN2 Neat1-201ENSMUST00000173672 20771 ntBASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Gm43260-201ENSMUST00000197378 2430 ntBASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Mir690-201ENSMUST00000102110 109 ntBASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Gm24951-201ENSMUST00000102182 109 ntBASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Gm25595-201ENSMUST00000102273 97 ntBASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Gm13329-201ENSMUST00000117063 265 ntBASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Mup-ps19-201ENSMUST00000120390 519 ntBASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Gm14694-201ENSMUST00000121856 282 ntBASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Gm26928-201ENSMUST00000182674 572 ntBASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Mir6336-201ENSMUST00000183581 130 ntBASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Mir6921-201ENSMUST00000183719 80 ntBASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Gm7825-201ENSMUST00000204046 416 ntBASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Gm45403-201ENSMUST00000209453 276 ntBASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Trim39Q9ESN2 AC241593.1-201ENSMUST00000224768 397 ntBASIC4.83□□□□□ -1.64
Trim39Q9ESN2 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Gm9923-201ENSMUST00000217785 1836 ntBASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
Trim39Q9ESN2 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
Trim39Q9ESN2 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Trim39Q9ESN2 Gm37589-201ENSMUST00000193609 3994 ntBASIC4.82□□□□□ -1.64
Trim39Q9ESN2 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim39Q9ESN2 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC4.82□□□□□ -1.64
Trim39Q9ESN2 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim39Q9ESN2 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Trim39Q9ESN2 Gm29112-201ENSMUST00000188962 3487 ntBASIC4.82□□□□□ -1.64
Trim39Q9ESN2 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC4.82□□□□□ -1.64
Trim39Q9ESN2 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim39Q9ESN2 Mir701-201ENSMUST00000102208 109 ntBASIC4.82□□□□□ -1.64
Trim39Q9ESN2 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Trim39Q9ESN2 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
Trim39Q9ESN2 n-R5s52-201ENSMUST00000104614 113 ntBASIC4.82□□□□□ -1.64
Trim39Q9ESN2 Gm14880-201ENSMUST00000117581 292 ntBASIC4.82□□□□□ -1.64
Trim39Q9ESN2 Gm14220-201ENSMUST00000118114 449 ntBASIC4.82□□□□□ -1.64
Trim39Q9ESN2 Gm14656-201ENSMUST00000120342 502 ntBASIC4.82□□□□□ -1.64
Trim39Q9ESN2 Gm11384-201ENSMUST00000121376 303 ntBASIC4.82□□□□□ -1.64
Trim39Q9ESN2 Gm26172-201ENSMUST00000158421 134 ntBASIC4.82□□□□□ -1.64
Trim39Q9ESN2 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Trim39Q9ESN2 Gm6214-201ENSMUST00000178845 541 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 97.7 ms