Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.79□□□□□ -1.96
Ccdc3Q9D6Y1 Gm44526-201ENSMUST00000204664 121 ntBASIC2.79□□□□□ -1.96
Ccdc3Q9D6Y1 Gm44157-201ENSMUST00000204720 410 ntBASIC2.79□□□□□ -1.96
Ccdc3Q9D6Y1 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC2.79□□□□□ -1.96
Ccdc3Q9D6Y1 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC2.79□□□□□ -1.96
Ccdc3Q9D6Y1 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Ccdc3Q9D6Y1 AC154184.2-201ENSMUST00000225335 349 ntBASIC2.79□□□□□ -1.96
Ccdc3Q9D6Y1 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.79□□□□□ -1.96
Ccdc3Q9D6Y1 AC151902.1-201ENSMUST00000227800 375 ntBASIC2.79□□□□□ -1.96
Ccdc3Q9D6Y1 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC2.79□□□□□ -1.96
Ccdc3Q9D6Y1 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Ccdc3Q9D6Y1 Gm22970-201ENSMUST00000083304 186 ntBASIC2.79□□□□□ -1.96
Ccdc3Q9D6Y1 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Ccdc3Q9D6Y1 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Ccdc3Q9D6Y1 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Ccdc3Q9D6Y1 Gm3584-201ENSMUST00000173822 2565 ntBASIC2.78□□□□□ -1.96
Ccdc3Q9D6Y1 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.78□□□□□ -1.96
Ccdc3Q9D6Y1 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
Ccdc3Q9D6Y1 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
Ccdc3Q9D6Y1 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Ccdc3Q9D6Y1 Gm9009-201ENSMUST00000117321 326 ntBASIC2.78□□□□□ -1.96
Ccdc3Q9D6Y1 Gm14821-201ENSMUST00000121975 435 ntBASIC2.78□□□□□ -1.96
Ccdc3Q9D6Y1 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.78□□□□□ -1.96
Ccdc3Q9D6Y1 Gm21893-201ENSMUST00000179119 397 ntBASIC2.78□□□□□ -1.96
Ccdc3Q9D6Y1 Gm27379-201ENSMUST00000183730 123 ntBASIC2.78□□□□□ -1.96
Ccdc3Q9D6Y1 Gm1833-201ENSMUST00000191608 682 ntBASIC2.78□□□□□ -1.96
Ccdc3Q9D6Y1 Gm7897-201ENSMUST00000193981 554 ntBASIC2.78□□□□□ -1.96
Ccdc3Q9D6Y1 Gm43848-201ENSMUST00000198060 1247 ntBASIC2.78□□□□□ -1.96
Ccdc3Q9D6Y1 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC2.78□□□□□ -1.96
Ccdc3Q9D6Y1 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Ccdc3Q9D6Y1 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC2.78□□□□□ -1.96
Ccdc3Q9D6Y1 Gm17872-201ENSMUST00000222550 532 ntBASIC2.78□□□□□ -1.96
Ccdc3Q9D6Y1 AC139294.2-201ENSMUST00000227159 285 ntBASIC2.78□□□□□ -1.96
Ccdc3Q9D6Y1 AC098719.1-201ENSMUST00000228920 371 ntBASIC2.78□□□□□ -1.96
Ccdc3Q9D6Y1 Gm10088-201ENSMUST00000074116 423 ntBASIC2.78□□□□□ -1.96
Ccdc3Q9D6Y1 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC2.78□□□□□ -1.96
Ccdc3Q9D6Y1 Mir21a-201ENSMUST00000083521 92 ntBASIC2.78□□□□□ -1.96
Ccdc3Q9D6Y1 Olfr203-201ENSMUST00000089305 924 ntBASIC2.78□□□□□ -1.96
Ccdc3Q9D6Y1 Gm22444-201ENSMUST00000093693 108 ntBASIC2.78□□□□□ -1.96
Ccdc3Q9D6Y1 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Ccdc3Q9D6Y1 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
Ccdc3Q9D6Y1 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
Ccdc3Q9D6Y1 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.97
Ccdc3Q9D6Y1 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Ccdc3Q9D6Y1 Gm38083-201ENSMUST00000194758 3498 ntBASIC2.77□□□□□ -1.97
Ccdc3Q9D6Y1 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Ccdc3Q9D6Y1 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Ccdc3Q9D6Y1 Gm14197-201ENSMUST00000117480 1049 ntBASIC2.77□□□□□ -1.97
Ccdc3Q9D6Y1 Gm14795-201ENSMUST00000118461 471 ntBASIC2.77□□□□□ -1.97
Ccdc3Q9D6Y1 Gm16100-201ENSMUST00000120489 231 ntBASIC2.77□□□□□ -1.97
Ccdc3Q9D6Y1 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC2.77□□□□□ -1.97
Ccdc3Q9D6Y1 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Ccdc3Q9D6Y1 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC2.77□□□□□ -1.97
Ccdc3Q9D6Y1 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC2.77□□□□□ -1.97
Ccdc3Q9D6Y1 Gm19203-201ENSMUST00000174049 939 ntBASIC2.77□□□□□ -1.97
Ccdc3Q9D6Y1 Mir1264-201ENSMUST00000175381 86 ntBASIC2.77□□□□□ -1.97
Ccdc3Q9D6Y1 Gm26585-201ENSMUST00000180890 630 ntBASIC2.77□□□□□ -1.97
Ccdc3Q9D6Y1 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC2.77□□□□□ -1.97
Ccdc3Q9D6Y1 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC2.77□□□□□ -1.97
Ccdc3Q9D6Y1 Gm34314-201ENSMUST00000203622 367 ntBASIC2.77□□□□□ -1.97
Ccdc3Q9D6Y1 Gm35931-201ENSMUST00000203931 448 ntBASIC2.77□□□□□ -1.97
Ccdc3Q9D6Y1 Gm44665-201ENSMUST00000205381 251 ntBASIC2.77□□□□□ -1.97
Ccdc3Q9D6Y1 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.77□□□□□ -1.97
Ccdc3Q9D6Y1 Gm45380-201ENSMUST00000210465 315 ntBASIC2.77□□□□□ -1.97
Ccdc3Q9D6Y1 AC171206.2-201ENSMUST00000215252 389 ntBASIC2.77□□□□□ -1.97
Ccdc3Q9D6Y1 AC132384.9-201ENSMUST00000218085 277 ntBASIC2.77□□□□□ -1.97
Ccdc3Q9D6Y1 Gm46436-201ENSMUST00000221851 1294 ntBASIC2.77□□□□□ -1.97
Ccdc3Q9D6Y1 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Ccdc3Q9D6Y1 AC140393.2-201ENSMUST00000226894 943 ntBASIC2.77□□□□□ -1.97
Ccdc3Q9D6Y1 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Ccdc3Q9D6Y1 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Ccdc3Q9D6Y1 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Ccdc3Q9D6Y1 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Ccdc3Q9D6Y1 Gm25202-201ENSMUST00000082838 191 ntBASIC2.77□□□□□ -1.97
Ccdc3Q9D6Y1 Gm44438-201ENSMUST00000204388 3236 ntBASIC2.77□□□□□ -1.97
Ccdc3Q9D6Y1 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Ccdc3Q9D6Y1 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.77□□□□□ -1.97
Ccdc3Q9D6Y1 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Ccdc3Q9D6Y1 Gm8675-201ENSMUST00000201408 1856 ntBASIC2.76□□□□□ -1.97
Ccdc3Q9D6Y1 Mir592-201ENSMUST00000102113 96 ntBASIC2.76□□□□□ -1.97
Ccdc3Q9D6Y1 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Ccdc3Q9D6Y1 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC2.76□□□□□ -1.97
Ccdc3Q9D6Y1 Gm3835-201ENSMUST00000120752 403 ntBASIC2.76□□□□□ -1.97
Ccdc3Q9D6Y1 Gm11344-201ENSMUST00000122011 335 ntBASIC2.76□□□□□ -1.97
Ccdc3Q9D6Y1 Gm25808-201ENSMUST00000122784 284 ntBASIC2.76□□□□□ -1.97
Ccdc3Q9D6Y1 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC2.76□□□□□ -1.97
Ccdc3Q9D6Y1 Gm24780-201ENSMUST00000157635 143 ntBASIC2.76□□□□□ -1.97
Ccdc3Q9D6Y1 Gm22011-201ENSMUST00000158790 123 ntBASIC2.76□□□□□ -1.97
Ccdc3Q9D6Y1 Gm3370-201ENSMUST00000171785 500 ntBASIC2.76□□□□□ -1.97
Ccdc3Q9D6Y1 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Ccdc3Q9D6Y1 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Ccdc3Q9D6Y1 Mir7118-201ENSMUST00000197760 61 ntBASIC2.76□□□□□ -1.97
Ccdc3Q9D6Y1 Gm43521-201ENSMUST00000197838 255 ntBASIC2.76□□□□□ -1.97
Ccdc3Q9D6Y1 Gm43107-201ENSMUST00000198729 255 ntBASIC2.76□□□□□ -1.97
Ccdc3Q9D6Y1 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Ccdc3Q9D6Y1 Gm18327-201ENSMUST00000202426 830 ntBASIC2.76□□□□□ -1.97
Ccdc3Q9D6Y1 Gm44865-201ENSMUST00000207240 531 ntBASIC2.76□□□□□ -1.97
Ccdc3Q9D6Y1 Gm45247-201ENSMUST00000210757 309 ntBASIC2.76□□□□□ -1.97
Ccdc3Q9D6Y1 Gm45452-201ENSMUST00000210905 177 ntBASIC2.76□□□□□ -1.97
Ccdc3Q9D6Y1 Gm19232-201ENSMUST00000211621 652 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 115.1 ms