Protein–RNA interactions for Protein: Q9D5Y1

Ccdc39, Coiled-coil domain-containing protein 39, mousemouse

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39Q9D5Y1 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.7□□□□□ -1.82
Ccdc39Q9D5Y1 Gm5583-201ENSMUST00000174328 1519 ntBASIC3.7□□□□□ -1.82
Ccdc39Q9D5Y1 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC3.7□□□□□ -1.82
Ccdc39Q9D5Y1 Gm7869-201ENSMUST00000121457 1322 ntBASIC3.7□□□□□ -1.82
Ccdc39Q9D5Y1 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Gm14833-201ENSMUST00000118345 1027 ntBASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Gm26477-201ENSMUST00000122617 323 ntBASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Gm23387-201ENSMUST00000158586 107 ntBASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Gm8161-201ENSMUST00000168739 481 ntBASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Gm21842-201ENSMUST00000177552 498 ntBASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Gm21626-201ENSMUST00000177791 498 ntBASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Gm21562-201ENSMUST00000177888 498 ntBASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Gm21539-201ENSMUST00000177925 498 ntBASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Gm17522-201ENSMUST00000178144 498 ntBASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Gm21599-201ENSMUST00000178249 498 ntBASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Gm21914-201ENSMUST00000178452 498 ntBASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Gm21723-201ENSMUST00000178692 498 ntBASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Gm21916-201ENSMUST00000178771 498 ntBASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Gm21801-201ENSMUST00000178865 498 ntBASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Gm21633-201ENSMUST00000178941 498 ntBASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Gm21821-201ENSMUST00000179646 498 ntBASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Gm21588-201ENSMUST00000180074 498 ntBASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Gm21780-201ENSMUST00000180128 498 ntBASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Gm21572-201ENSMUST00000180134 498 ntBASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Gm21529-201ENSMUST00000180175 498 ntBASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Gm29370-202ENSMUST00000187476 499 ntBASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Gm44964-201ENSMUST00000207011 273 ntBASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Gm18598-201ENSMUST00000207724 597 ntBASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Gm44600-201ENSMUST00000208540 111 ntBASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 CT573422.1-201ENSMUST00000216655 405 ntBASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 AC123618.1-201ENSMUST00000220174 360 ntBASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 AC147639.1-201ENSMUST00000224216 661 ntBASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 AC157772.2-201ENSMUST00000228202 259 ntBASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 AC164297.4-201ENSMUST00000224225 1307 ntBASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.69□□□□□ -1.82
Ccdc39Q9D5Y1 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 Gm12782-201ENSMUST00000117519 727 ntBASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 Gm14987-201ENSMUST00000117820 676 ntBASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 Gm14607-201ENSMUST00000119119 491 ntBASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 Gm13273-201ENSMUST00000119737 159 ntBASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 Gm16053-201ENSMUST00000120511 188 ntBASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 Gm24914-201ENSMUST00000157285 313 ntBASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 Gm24190-201ENSMUST00000157976 216 ntBASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 Gm4479-201ENSMUST00000178807 171 ntBASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 Gm28390-201ENSMUST00000185212 700 ntBASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 Gm7634-201ENSMUST00000185778 553 ntBASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 Gm29602-201ENSMUST00000186887 442 ntBASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 Gm8242-202ENSMUST00000193056 475 ntBASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 Gm32447-201ENSMUST00000194265 697 ntBASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 Gm18433-202ENSMUST00000195682 196 ntBASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 Gm42796-201ENSMUST00000199913 1087 ntBASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 Gm7946-201ENSMUST00000203326 958 ntBASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 Gm44988-201ENSMUST00000203835 1161 ntBASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 Gm19244-201ENSMUST00000204340 253 ntBASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 AC153529.1-201ENSMUST00000217818 370 ntBASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 AC125531.1-201ENSMUST00000219849 221 ntBASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 AC117656.3-204ENSMUST00000225656 859 ntBASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 AC115878.1-201ENSMUST00000227247 334 ntBASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms