Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Pcdhb20Q91XZ9 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.84□□□□□ -1.47
Pcdhb20Q91XZ9 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdhb20Q91XZ9 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdhb20Q91XZ9 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Pcdhb20Q91XZ9 Gm13811-201ENSMUST00000117800 256 ntBASIC5.84□□□□□ -1.47
Pcdhb20Q91XZ9 Gm13432-201ENSMUST00000118861 241 ntBASIC5.84□□□□□ -1.47
Pcdhb20Q91XZ9 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdhb20Q91XZ9 Gm11334-201ENSMUST00000121969 156 ntBASIC5.84□□□□□ -1.47
Pcdhb20Q91XZ9 Gm7241-201ENSMUST00000159853 357 ntBASIC5.84□□□□□ -1.47
Pcdhb20Q91XZ9 Gm22655-201ENSMUST00000174949 96 ntBASIC5.84□□□□□ -1.47
Pcdhb20Q91XZ9 Gm5777-201ENSMUST00000177265 448 ntBASIC5.84□□□□□ -1.47
Pcdhb20Q91XZ9 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdhb20Q91XZ9 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC5.84□□□□□ -1.47
Pcdhb20Q91XZ9 Gm44316-201ENSMUST00000199274 97 ntBASIC5.84□□□□□ -1.47
Pcdhb20Q91XZ9 Gm44239-201ENSMUST00000204228 271 ntBASIC5.84□□□□□ -1.47
Pcdhb20Q91XZ9 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC5.84□□□□□ -1.47
Pcdhb20Q91XZ9 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdhb20Q91XZ9 Gm44583-201ENSMUST00000207478 281 ntBASIC5.84□□□□□ -1.47
Pcdhb20Q91XZ9 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC5.84□□□□□ -1.47
Pcdhb20Q91XZ9 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC5.84□□□□□ -1.47
Pcdhb20Q91XZ9 AC140254.1-201ENSMUST00000220063 331 ntBASIC5.84□□□□□ -1.47
Pcdhb20Q91XZ9 Gm5229-201ENSMUST00000039375 354 ntBASIC5.84□□□□□ -1.47
Pcdhb20Q91XZ9 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
Pcdhb20Q91XZ9 Gm38128-201ENSMUST00000192085 3250 ntBASIC5.84□□□□□ -1.47
Pcdhb20Q91XZ9 Gm37788-201ENSMUST00000193958 2705 ntBASIC5.84□□□□□ -1.47
Pcdhb20Q91XZ9 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
Pcdhb20Q91XZ9 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdhb20Q91XZ9 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC5.84□□□□□ -1.47
Pcdhb20Q91XZ9 Gm4994-201ENSMUST00000118379 2187 ntBASIC5.84□□□□□ -1.47
Pcdhb20Q91XZ9 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC5.84□□□□□ -1.47
Pcdhb20Q91XZ9 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Pcdhb20Q91XZ9 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC5.84□□□□□ -1.47
Pcdhb20Q91XZ9 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdhb20Q91XZ9 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Pcdhb20Q91XZ9 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Pcdhb20Q91XZ9 Gm43259-201ENSMUST00000198446 3277 ntBASIC5.84□□□□□ -1.48
Pcdhb20Q91XZ9 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Pcdhb20Q91XZ9 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Pcdhb20Q91XZ9 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Gm38377-201ENSMUST00000193253 3772 ntBASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Gm20486-201ENSMUST00000101544 128 ntBASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Mir700-201ENSMUST00000102169 79 ntBASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Gm26081-201ENSMUST00000104068 132 ntBASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Gm25967-201ENSMUST00000157168 147 ntBASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Gm24213-201ENSMUST00000158255 258 ntBASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Gm24224-201ENSMUST00000158828 258 ntBASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Gm20480-201ENSMUST00000173953 250 ntBASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Gm24926-201ENSMUST00000178053 79 ntBASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Gm22632-201ENSMUST00000178266 79 ntBASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Mir6992-201ENSMUST00000183342 109 ntBASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Mir21b-201ENSMUST00000184317 108 ntBASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Gm37361-201ENSMUST00000194345 132 ntBASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Gm44382-201ENSMUST00000198683 122 ntBASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Gm18405-201ENSMUST00000220743 511 ntBASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 AC156037.1-201ENSMUST00000221133 127 ntBASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 AC125543.3-201ENSMUST00000221991 126 ntBASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 AC160550.3-201ENSMUST00000226818 400 ntBASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Gm7135-202ENSMUST00000191257 1905 ntBASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Gm43508-201ENSMUST00000197251 3783 ntBASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdhb20Q91XZ9 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Pcdhb20Q91XZ9 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdhb20Q91XZ9 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
Pcdhb20Q91XZ9 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdhb20Q91XZ9 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.82□□□□□ -1.48
Pcdhb20Q91XZ9 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC5.82□□□□□ -1.48
Pcdhb20Q91XZ9 Gm43025-201ENSMUST00000201764 1886 ntBASIC5.82□□□□□ -1.48
Pcdhb20Q91XZ9 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdhb20Q91XZ9 Mir669b-201ENSMUST00000102172 97 ntBASIC5.82□□□□□ -1.48
Pcdhb20Q91XZ9 Gm13077-201ENSMUST00000121941 484 ntBASIC5.82□□□□□ -1.48
Pcdhb20Q91XZ9 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdhb20Q91XZ9 Gm24767-201ENSMUST00000158509 95 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms