Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
Lsm1Q8VC85 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC2.8□□□□□ -1.96
Lsm1Q8VC85 Gm14448-201ENSMUST00000116383 210 ntBASIC2.8□□□□□ -1.96
Lsm1Q8VC85 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC2.8□□□□□ -1.96
Lsm1Q8VC85 Gm15988-201ENSMUST00000118677 367 ntBASIC2.8□□□□□ -1.96
Lsm1Q8VC85 Gm15037-201ENSMUST00000120358 259 ntBASIC2.8□□□□□ -1.96
Lsm1Q8VC85 Gm12755-201ENSMUST00000122297 282 ntBASIC2.8□□□□□ -1.96
Lsm1Q8VC85 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC2.8□□□□□ -1.96
Lsm1Q8VC85 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC2.8□□□□□ -1.96
Lsm1Q8VC85 Gm7582-201ENSMUST00000160831 603 ntBASIC2.8□□□□□ -1.96
Lsm1Q8VC85 Gm17204-201ENSMUST00000167936 478 ntBASIC2.8□□□□□ -1.96
Lsm1Q8VC85 Gm3104-201ENSMUST00000171004 473 ntBASIC2.8□□□□□ -1.96
Lsm1Q8VC85 Gm20534-201ENSMUST00000172957 172 ntBASIC2.8□□□□□ -1.96
Lsm1Q8VC85 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC2.8□□□□□ -1.96
Lsm1Q8VC85 Npn2-202ENSMUST00000189275 235 ntBASIC2.8□□□□□ -1.96
Lsm1Q8VC85 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC2.8□□□□□ -1.96
Lsm1Q8VC85 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Lsm1Q8VC85 Gm15235-201ENSMUST00000200572 194 ntBASIC2.8□□□□□ -1.96
Lsm1Q8VC85 Gm6012-201ENSMUST00000210821 730 ntBASIC2.8□□□□□ -1.96
Lsm1Q8VC85 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
Lsm1Q8VC85 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.8□□□□□ -1.96
Lsm1Q8VC85 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC2.8□□□□□ -1.96
Lsm1Q8VC85 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.8□□□□□ -1.96
Lsm1Q8VC85 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.8□□□□□ -1.96
Lsm1Q8VC85 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Lsm1Q8VC85 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Lsm1Q8VC85 Olfr1193-201ENSMUST00000081697 957 ntBASIC2.8□□□□□ -1.96
Lsm1Q8VC85 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Lsm1Q8VC85 Mir804-201ENSMUST00000103251 95 ntBASIC2.79□□□□□ -1.96
Lsm1Q8VC85 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Lsm1Q8VC85 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC2.79□□□□□ -1.96
Lsm1Q8VC85 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Lsm1Q8VC85 Defa-ps5-201ENSMUST00000121541 279 ntBASIC2.79□□□□□ -1.96
Lsm1Q8VC85 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Lsm1Q8VC85 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC2.79□□□□□ -1.96
Lsm1Q8VC85 Gm23325-201ENSMUST00000157422 129 ntBASIC2.79□□□□□ -1.96
Lsm1Q8VC85 Gm8338-201ENSMUST00000163928 363 ntBASIC2.79□□□□□ -1.96
Lsm1Q8VC85 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC2.79□□□□□ -1.96
Lsm1Q8VC85 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC2.79□□□□□ -1.96
Lsm1Q8VC85 Gm28623-201ENSMUST00000187219 192 ntBASIC2.79□□□□□ -1.96
Lsm1Q8VC85 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Lsm1Q8VC85 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC2.79□□□□□ -1.96
Lsm1Q8VC85 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Lsm1Q8VC85 Gm43104-201ENSMUST00000197234 311 ntBASIC2.79□□□□□ -1.96
Lsm1Q8VC85 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.79□□□□□ -1.96
Lsm1Q8VC85 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2.79□□□□□ -1.96
Lsm1Q8VC85 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC2.79□□□□□ -1.96
Lsm1Q8VC85 Gm44964-201ENSMUST00000207011 273 ntBASIC2.79□□□□□ -1.96
Lsm1Q8VC85 Gm44688-201ENSMUST00000209083 537 ntBASIC2.79□□□□□ -1.96
Lsm1Q8VC85 AC093926.1-201ENSMUST00000213730 243 ntBASIC2.79□□□□□ -1.96
Lsm1Q8VC85 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC2.79□□□□□ -1.96
Lsm1Q8VC85 AL590503.1-201ENSMUST00000222053 321 ntBASIC2.79□□□□□ -1.96
Lsm1Q8VC85 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Lsm1Q8VC85 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC2.79□□□□□ -1.96
Lsm1Q8VC85 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.79□□□□□ -1.96
Lsm1Q8VC85 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Lsm1Q8VC85 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Lsm1Q8VC85 Gm42870-201ENSMUST00000199355 3470 ntBASIC2.78□□□□□ -1.96
Lsm1Q8VC85 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Lsm1Q8VC85 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Lsm1Q8VC85 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Lsm1Q8VC85 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Lsm1Q8VC85 Gm6207-201ENSMUST00000120075 1386 ntBASIC2.78□□□□□ -1.96
Lsm1Q8VC85 Gm6228-201ENSMUST00000178856 1386 ntBASIC2.78□□□□□ -1.96
Lsm1Q8VC85 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Lsm1Q8VC85 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Lsm1Q8VC85 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
Lsm1Q8VC85 Gm11881-201ENSMUST00000119408 572 ntBASIC2.78□□□□□ -1.96
Lsm1Q8VC85 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Lsm1Q8VC85 Gm3835-201ENSMUST00000120752 403 ntBASIC2.78□□□□□ -1.96
Lsm1Q8VC85 Gm14162-201ENSMUST00000121985 601 ntBASIC2.78□□□□□ -1.96
Lsm1Q8VC85 Gm25107-201ENSMUST00000122472 129 ntBASIC2.78□□□□□ -1.96
Lsm1Q8VC85 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC2.78□□□□□ -1.96
Lsm1Q8VC85 Gm23667-201ENSMUST00000157466 120 ntBASIC2.78□□□□□ -1.96
Lsm1Q8VC85 Gm22416-201ENSMUST00000158590 88 ntBASIC2.78□□□□□ -1.96
Lsm1Q8VC85 Gm25119-201ENSMUST00000158815 88 ntBASIC2.78□□□□□ -1.96
Lsm1Q8VC85 Gm16236-201ENSMUST00000159588 379 ntBASIC2.78□□□□□ -1.96
Lsm1Q8VC85 Gm8161-201ENSMUST00000168739 481 ntBASIC2.78□□□□□ -1.96
Lsm1Q8VC85 Gm25944-201ENSMUST00000178758 94 ntBASIC2.78□□□□□ -1.96
Lsm1Q8VC85 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
Lsm1Q8VC85 Gm9541-201ENSMUST00000188409 502 ntBASIC2.78□□□□□ -1.96
Lsm1Q8VC85 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Lsm1Q8VC85 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC2.78□□□□□ -1.96
Lsm1Q8VC85 Gm45072-201ENSMUST00000208673 929 ntBASIC2.78□□□□□ -1.96
Lsm1Q8VC85 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC2.78□□□□□ -1.96
Lsm1Q8VC85 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC2.78□□□□□ -1.97
Lsm1Q8VC85 Gm17976-201ENSMUST00000184037 1909 ntBASIC2.78□□□□□ -1.97
Lsm1Q8VC85 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
Lsm1Q8VC85 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Lsm1Q8VC85 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.77□□□□□ -1.97
Lsm1Q8VC85 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Lsm1Q8VC85 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC2.77□□□□□ -1.97
Lsm1Q8VC85 Gm11229-201ENSMUST00000121993 437 ntBASIC2.77□□□□□ -1.97
Lsm1Q8VC85 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.77□□□□□ -1.97
Lsm1Q8VC85 Gm14389-201ENSMUST00000140453 241 ntBASIC2.77□□□□□ -1.97
Lsm1Q8VC85 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC2.77□□□□□ -1.97
Lsm1Q8VC85 Gm8289-201ENSMUST00000144814 1182 ntBASIC2.77□□□□□ -1.97
Lsm1Q8VC85 Gm17194-201ENSMUST00000164610 348 ntBASIC2.77□□□□□ -1.97
Lsm1Q8VC85 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Lsm1Q8VC85 Gm28744-201ENSMUST00000189939 340 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms