Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.66□□□□□ -1.66
Ushbp1Q8R370 AC166369.1-201ENSMUST00000228126 351 ntBASIC4.66□□□□□ -1.66
Ushbp1Q8R370 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Ushbp1Q8R370 Mir504-201ENSMUST00000093602 79 ntBASIC4.66□□□□□ -1.66
Ushbp1Q8R370 Gm7381-201ENSMUST00000098958 300 ntBASIC4.66□□□□□ -1.66
Ushbp1Q8R370 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Ushbp1Q8R370 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Ushbp1Q8R370 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Ushbp1Q8R370 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.66□□□□□ -1.66
Ushbp1Q8R370 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Ushbp1Q8R370 Gm4855-201ENSMUST00000192270 1967 ntBASIC4.65□□□□□ -1.66
Ushbp1Q8R370 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC4.65□□□□□ -1.66
Ushbp1Q8R370 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
Ushbp1Q8R370 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC4.65□□□□□ -1.66
Ushbp1Q8R370 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Ushbp1Q8R370 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Ushbp1Q8R370 Gm13478-201ENSMUST00000118312 413 ntBASIC4.65□□□□□ -1.67
Ushbp1Q8R370 Gm14469-201ENSMUST00000118363 202 ntBASIC4.65□□□□□ -1.67
Ushbp1Q8R370 Gm14867-201ENSMUST00000120156 866 ntBASIC4.65□□□□□ -1.67
Ushbp1Q8R370 Gm14392-201ENSMUST00000120332 401 ntBASIC4.65□□□□□ -1.67
Ushbp1Q8R370 Gm25666-201ENSMUST00000157702 107 ntBASIC4.65□□□□□ -1.67
Ushbp1Q8R370 Gm24998-201ENSMUST00000157908 89 ntBASIC4.65□□□□□ -1.67
Ushbp1Q8R370 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
Ushbp1Q8R370 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
Ushbp1Q8R370 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Ushbp1Q8R370 Gm19932-201ENSMUST00000177033 313 ntBASIC4.65□□□□□ -1.67
Ushbp1Q8R370 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Ushbp1Q8R370 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Ushbp1Q8R370 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Ushbp1Q8R370 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Ushbp1Q8R370 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Ushbp1Q8R370 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Ushbp1Q8R370 Gm27588-201ENSMUST00000185096 263 ntBASIC4.65□□□□□ -1.67
Ushbp1Q8R370 Gm28255-201ENSMUST00000187101 694 ntBASIC4.65□□□□□ -1.67
Ushbp1Q8R370 Gm29365-201ENSMUST00000189461 699 ntBASIC4.65□□□□□ -1.67
Ushbp1Q8R370 Ighv3-7-201ENSMUST00000193370 348 ntBASIC4.65□□□□□ -1.67
Ushbp1Q8R370 Gm43541-201ENSMUST00000197208 581 ntBASIC4.65□□□□□ -1.67
Ushbp1Q8R370 Gm36259-201ENSMUST00000197340 392 ntBASIC4.65□□□□□ -1.67
Ushbp1Q8R370 Gm45590-201ENSMUST00000209715 262 ntBASIC4.65□□□□□ -1.67
Ushbp1Q8R370 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC4.65□□□□□ -1.67
Ushbp1Q8R370 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC4.65□□□□□ -1.67
Ushbp1Q8R370 Gm18120-201ENSMUST00000220079 511 ntBASIC4.65□□□□□ -1.67
Ushbp1Q8R370 AC192333.1-201ENSMUST00000224573 376 ntBASIC4.65□□□□□ -1.67
Ushbp1Q8R370 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC4.65□□□□□ -1.67
Ushbp1Q8R370 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Ushbp1Q8R370 n-R5s50-201ENSMUST00000083168 111 ntBASIC4.65□□□□□ -1.67
Ushbp1Q8R370 Gm25859-201ENSMUST00000083710 91 ntBASIC4.65□□□□□ -1.67
Ushbp1Q8R370 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Ushbp1Q8R370 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Ushbp1Q8R370 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC4.65□□□□□ -1.67
Ushbp1Q8R370 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Ushbp1Q8R370 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC4.65□□□□□ -1.67
Ushbp1Q8R370 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
Ushbp1Q8R370 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Ushbp1Q8R370 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.64□□□□□ -1.67
Ushbp1Q8R370 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.64□□□□□ -1.67
Ushbp1Q8R370 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.64□□□□□ -1.67
Ushbp1Q8R370 Gm38091-201ENSMUST00000192418 3871 ntBASIC4.64□□□□□ -1.67
Ushbp1Q8R370 Gm14421-201ENSMUST00000121755 1958 ntBASIC4.64□□□□□ -1.67
Ushbp1Q8R370 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.64□□□□□ -1.67
Ushbp1Q8R370 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.64□□□□□ -1.67
Ushbp1Q8R370 Gm25088-201ENSMUST00000101803 79 ntBASIC4.64□□□□□ -1.67
Ushbp1Q8R370 Gm5123-201ENSMUST00000121905 837 ntBASIC4.64□□□□□ -1.67
Ushbp1Q8R370 Gm23463-201ENSMUST00000122468 99 ntBASIC4.64□□□□□ -1.67
Ushbp1Q8R370 Gm22453-201ENSMUST00000122801 318 ntBASIC4.64□□□□□ -1.67
Ushbp1Q8R370 Gm5755-201ENSMUST00000152394 837 ntBASIC4.64□□□□□ -1.67
Ushbp1Q8R370 Gm25908-201ENSMUST00000157624 98 ntBASIC4.64□□□□□ -1.67
Ushbp1Q8R370 Gm24503-201ENSMUST00000158454 135 ntBASIC4.64□□□□□ -1.67
Ushbp1Q8R370 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC4.64□□□□□ -1.67
Ushbp1Q8R370 Gm25194-201ENSMUST00000177987 79 ntBASIC4.64□□□□□ -1.67
Ushbp1Q8R370 Gm27905-201ENSMUST00000184005 207 ntBASIC4.64□□□□□ -1.67
Ushbp1Q8R370 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC4.64□□□□□ -1.67
Ushbp1Q8R370 Gm36984-201ENSMUST00000192770 235 ntBASIC4.64□□□□□ -1.67
Ushbp1Q8R370 Gm38076-201ENSMUST00000193889 450 ntBASIC4.64□□□□□ -1.67
Ushbp1Q8R370 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC4.64□□□□□ -1.67
Ushbp1Q8R370 Gm43649-201ENSMUST00000196596 391 ntBASIC4.64□□□□□ -1.67
Ushbp1Q8R370 Gm44032-201ENSMUST00000204841 166 ntBASIC4.64□□□□□ -1.67
Ushbp1Q8R370 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.64□□□□□ -1.67
Ushbp1Q8R370 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC4.64□□□□□ -1.67
Ushbp1Q8R370 Gm7407-201ENSMUST00000208301 568 ntBASIC4.64□□□□□ -1.67
Ushbp1Q8R370 Olfr936-202ENSMUST00000216912 937 ntBASIC4.64□□□□□ -1.67
Ushbp1Q8R370 CT030242.2-201ENSMUST00000221588 148 ntBASIC4.64□□□□□ -1.67
Ushbp1Q8R370 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC4.64□□□□□ -1.67
Ushbp1Q8R370 Gm10038-201ENSMUST00000077233 441 ntBASIC4.64□□□□□ -1.67
Ushbp1Q8R370 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Ushbp1Q8R370 Gm23378-201ENSMUST00000082942 107 ntBASIC4.64□□□□□ -1.67
Ushbp1Q8R370 Gm22364-201ENSMUST00000083097 98 ntBASIC4.64□□□□□ -1.67
Ushbp1Q8R370 Gm24043-201ENSMUST00000083108 116 ntBASIC4.64□□□□□ -1.67
Ushbp1Q8R370 Gm26128-201ENSMUST00000083170 110 ntBASIC4.64□□□□□ -1.67
Ushbp1Q8R370 Mir181a-1-201ENSMUST00000083631 87 ntBASIC4.64□□□□□ -1.67
Ushbp1Q8R370 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Ushbp1Q8R370 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Ushbp1Q8R370 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC4.64□□□□□ -1.67
Ushbp1Q8R370 Gm43374-201ENSMUST00000202498 2391 ntBASIC4.64□□□□□ -1.67
Ushbp1Q8R370 Gm44438-201ENSMUST00000204388 3236 ntBASIC4.64□□□□□ -1.67
Ushbp1Q8R370 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Ushbp1Q8R370 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms