Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Col6a6Q8C6K9 Gm37320-201ENSMUST00000192781 4953 ntBASIC1.99□□□□□ -2.09
Col6a6Q8C6K9 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Col6a6Q8C6K9 Gm28623-201ENSMUST00000187219 192 ntBASIC1.99□□□□□ -2.09
Col6a6Q8C6K9 Gm29534-201ENSMUST00000187328 382 ntBASIC1.99□□□□□ -2.09
Col6a6Q8C6K9 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC1.99□□□□□ -2.09
Col6a6Q8C6K9 Gm42818-201ENSMUST00000198869 987 ntBASIC1.99□□□□□ -2.09
Col6a6Q8C6K9 AC122464.1-201ENSMUST00000202789 770 ntBASIC1.99□□□□□ -2.09
Col6a6Q8C6K9 Gm4263-202ENSMUST00000221392 667 ntBASIC1.99□□□□□ -2.09
Col6a6Q8C6K9 Gm7214-201ENSMUST00000222428 272 ntBASIC1.99□□□□□ -2.09
Col6a6Q8C6K9 Gm26072-201ENSMUST00000083135 107 ntBASIC1.99□□□□□ -2.09
Col6a6Q8C6K9 Gm42483-201ENSMUST00000197556 1742 ntBASIC1.98□□□□□ -2.09
Col6a6Q8C6K9 Mir542-201ENSMUST00000102186 85 ntBASIC1.98□□□□□ -2.09
Col6a6Q8C6K9 Mir693-201ENSMUST00000102187 89 ntBASIC1.98□□□□□ -2.09
Col6a6Q8C6K9 Gm27796-201ENSMUST00000183863 261 ntBASIC1.98□□□□□ -2.09
Col6a6Q8C6K9 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC1.98□□□□□ -2.09
Col6a6Q8C6K9 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
Col6a6Q8C6K9 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Col6a6Q8C6K9 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Col6a6Q8C6K9 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Col6a6Q8C6K9 Gm37566-201ENSMUST00000192363 4355 ntBASIC1.98□□□□□ -2.09
Col6a6Q8C6K9 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
Col6a6Q8C6K9 Gm12935-201ENSMUST00000119352 246 ntBASIC1.98□□□□□ -2.09
Col6a6Q8C6K9 Gm14119-201ENSMUST00000119511 235 ntBASIC1.98□□□□□ -2.09
Col6a6Q8C6K9 Gm13687-201ENSMUST00000119857 282 ntBASIC1.98□□□□□ -2.09
Col6a6Q8C6K9 Gm12607-201ENSMUST00000120724 493 ntBASIC1.98□□□□□ -2.09
Col6a6Q8C6K9 Gm24010-201ENSMUST00000157731 282 ntBASIC1.98□□□□□ -2.09
Col6a6Q8C6K9 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC1.98□□□□□ -2.09
Col6a6Q8C6K9 Gm44533-201ENSMUST00000207782 268 ntBASIC1.98□□□□□ -2.09
Col6a6Q8C6K9 Gm18453-201ENSMUST00000208000 626 ntBASIC1.98□□□□□ -2.09
Col6a6Q8C6K9 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Col6a6Q8C6K9 Gm43320-201ENSMUST00000196047 2916 ntBASIC1.98□□□□□ -2.09
Col6a6Q8C6K9 Gm43379-201ENSMUST00000196253 7726 ntBASIC1.98□□□□□ -2.09
Col6a6Q8C6K9 Gm15773-201ENSMUST00000118665 1448 ntBASIC1.98□□□□□ -2.09
Col6a6Q8C6K9 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Col6a6Q8C6K9 AC153881.3-201ENSMUST00000218494 1561 ntBASIC1.97□□□□□ -2.09
Col6a6Q8C6K9 Gm14876-201ENSMUST00000120795 327 ntBASIC1.97□□□□□ -2.09
Col6a6Q8C6K9 Gm22159-201ENSMUST00000158412 130 ntBASIC1.97□□□□□ -2.09
Col6a6Q8C6K9 Gm27163-201ENSMUST00000184767 409 ntBASIC1.97□□□□□ -2.09
Col6a6Q8C6K9 Gm10212-201ENSMUST00000087884 324 ntBASIC1.97□□□□□ -2.09
Col6a6Q8C6K9 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Col6a6Q8C6K9 Gm44680-201ENSMUST00000208414 2910 ntBASIC1.97□□□□□ -2.09
Col6a6Q8C6K9 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC1.97□□□□□ -2.09
Col6a6Q8C6K9 Gm13471-201ENSMUST00000122057 433 ntBASIC1.97□□□□□ -2.09
Col6a6Q8C6K9 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC1.97□□□□□ -2.09
Col6a6Q8C6K9 Gm22108-201ENSMUST00000177961 106 ntBASIC1.97□□□□□ -2.09
Col6a6Q8C6K9 Gm24798-201ENSMUST00000179334 106 ntBASIC1.97□□□□□ -2.09
Col6a6Q8C6K9 Gm28975-201ENSMUST00000186412 686 ntBASIC1.97□□□□□ -2.09
Col6a6Q8C6K9 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Col6a6Q8C6K9 Gm28974-201ENSMUST00000187893 231 ntBASIC1.97□□□□□ -2.09
Col6a6Q8C6K9 Mir3073b-201ENSMUST00000199383 60 ntBASIC1.97□□□□□ -2.09
Col6a6Q8C6K9 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC1.97□□□□□ -2.09
Col6a6Q8C6K9 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC1.97□□□□□ -2.09
Col6a6Q8C6K9 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Col6a6Q8C6K9 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC1.96□□□□□ -2.1
Col6a6Q8C6K9 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Col6a6Q8C6K9 Gm43662-201ENSMUST00000198310 2271 ntBASIC1.96□□□□□ -2.1
Col6a6Q8C6K9 Gm5653-201ENSMUST00000223393 1337 ntBASIC1.96□□□□□ -2.1
Col6a6Q8C6K9 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Col6a6Q8C6K9 Gm14823-201ENSMUST00000117698 238 ntBASIC1.96□□□□□ -2.1
Col6a6Q8C6K9 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC1.96□□□□□ -2.1
Col6a6Q8C6K9 Gm14957-201ENSMUST00000121069 817 ntBASIC1.96□□□□□ -2.1
Col6a6Q8C6K9 Gm23670-201ENSMUST00000157469 119 ntBASIC1.96□□□□□ -2.1
Col6a6Q8C6K9 Gm24317-201ENSMUST00000178536 107 ntBASIC1.96□□□□□ -2.1
Col6a6Q8C6K9 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC1.96□□□□□ -2.1
Col6a6Q8C6K9 CT030238.4-201ENSMUST00000228579 801 ntBASIC1.96□□□□□ -2.1
Col6a6Q8C6K9 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Col6a6Q8C6K9 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC1.96□□□□□ -2.1
Col6a6Q8C6K9 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
Col6a6Q8C6K9 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Col6a6Q8C6K9 Gm24671-201ENSMUST00000104159 158 ntBASIC1.96□□□□□ -2.1
Col6a6Q8C6K9 Gm14793-201ENSMUST00000118739 311 ntBASIC1.96□□□□□ -2.1
Col6a6Q8C6K9 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC1.96□□□□□ -2.1
Col6a6Q8C6K9 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC1.96□□□□□ -2.1
Col6a6Q8C6K9 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC1.96□□□□□ -2.1
Col6a6Q8C6K9 Gm28788-201ENSMUST00000189717 375 ntBASIC1.96□□□□□ -2.1
Col6a6Q8C6K9 Gm29558-201ENSMUST00000190134 375 ntBASIC1.96□□□□□ -2.1
Col6a6Q8C6K9 Mir3087-201ENSMUST00000199405 56 ntBASIC1.96□□□□□ -2.1
Col6a6Q8C6K9 AC153899.1-201ENSMUST00000214092 1117 ntBASIC1.96□□□□□ -2.1
Col6a6Q8C6K9 AC211878.5-201ENSMUST00000221697 409 ntBASIC1.96□□□□□ -2.1
Col6a6Q8C6K9 AC154329.2-201ENSMUST00000225257 383 ntBASIC1.96□□□□□ -2.1
Col6a6Q8C6K9 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.96□□□□□ -2.1
Col6a6Q8C6K9 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Col6a6Q8C6K9 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Col6a6Q8C6K9 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Col6a6Q8C6K9 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
Col6a6Q8C6K9 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Col6a6Q8C6K9 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC1.95□□□□□ -2.1
Col6a6Q8C6K9 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC1.95□□□□□ -2.1
Col6a6Q8C6K9 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC1.95□□□□□ -2.1
Col6a6Q8C6K9 Gm19269-201ENSMUST00000211401 804 ntBASIC1.95□□□□□ -2.1
Col6a6Q8C6K9 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
Col6a6Q8C6K9 Gm37965-201ENSMUST00000195304 1362 ntBASIC1.95□□□□□ -2.1
Col6a6Q8C6K9 Gm42482-201ENSMUST00000198904 1947 ntBASIC1.95□□□□□ -2.1
Col6a6Q8C6K9 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Col6a6Q8C6K9 Gm14415-201ENSMUST00000118260 1578 ntBASIC1.95□□□□□ -2.1
Col6a6Q8C6K9 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Col6a6Q8C6K9 Gm24890-201ENSMUST00000104389 102 ntBASIC1.94□□□□□ -2.1
Col6a6Q8C6K9 Gm13432-201ENSMUST00000118861 241 ntBASIC1.94□□□□□ -2.1
Col6a6Q8C6K9 Gm12849-201ENSMUST00000120013 739 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 101.1 ms