Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim35Q8C006 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Trim35Q8C006 Gm38248-201ENSMUST00000193744 5783 ntBASIC6.44□□□□□ -1.38
Trim35Q8C006 Rnu11-201ENSMUST00000104135 134 ntBASIC6.44□□□□□ -1.38
Trim35Q8C006 Gm13761-201ENSMUST00000117238 807 ntBASIC6.44□□□□□ -1.38
Trim35Q8C006 Gm14870-201ENSMUST00000118414 156 ntBASIC6.44□□□□□ -1.38
Trim35Q8C006 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC6.44□□□□□ -1.38
Trim35Q8C006 Gm8648-201ENSMUST00000122457 221 ntBASIC6.44□□□□□ -1.38
Trim35Q8C006 Gm15733-201ENSMUST00000132957 242 ntBASIC6.44□□□□□ -1.38
Trim35Q8C006 Gm22228-201ENSMUST00000157364 101 ntBASIC6.44□□□□□ -1.38
Trim35Q8C006 Gm22850-201ENSMUST00000157714 82 ntBASIC6.44□□□□□ -1.38
Trim35Q8C006 Mir3471-2-201ENSMUST00000174896 102 ntBASIC6.44□□□□□ -1.38
Trim35Q8C006 Gm25464-201ENSMUST00000175481 107 ntBASIC6.44□□□□□ -1.38
Trim35Q8C006 Gm25354-201ENSMUST00000179110 105 ntBASIC6.44□□□□□ -1.38
Trim35Q8C006 Gm27158-201ENSMUST00000183813 238 ntBASIC6.44□□□□□ -1.38
Trim35Q8C006 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC6.44□□□□□ -1.38
Trim35Q8C006 Gm2325-201ENSMUST00000186637 581 ntBASIC6.44□□□□□ -1.38
Trim35Q8C006 Gm6137-201ENSMUST00000187552 578 ntBASIC6.44□□□□□ -1.38
Trim35Q8C006 Gm18177-201ENSMUST00000188373 404 ntBASIC6.44□□□□□ -1.38
Trim35Q8C006 Gm37681-201ENSMUST00000193880 727 ntBASIC6.44□□□□□ -1.38
Trim35Q8C006 Gm37116-201ENSMUST00000195161 147 ntBASIC6.44□□□□□ -1.38
Trim35Q8C006 AC174780.1-201ENSMUST00000199415 1107 ntBASIC6.44□□□□□ -1.38
Trim35Q8C006 Gm36448-201ENSMUST00000199916 438 ntBASIC6.44□□□□□ -1.38
Trim35Q8C006 Gm44360-201ENSMUST00000200081 82 ntBASIC6.44□□□□□ -1.38
Trim35Q8C006 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC6.44□□□□□ -1.38
Trim35Q8C006 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC6.44□□□□□ -1.38
Trim35Q8C006 AC124601.1-201ENSMUST00000220531 135 ntBASIC6.44□□□□□ -1.38
Trim35Q8C006 AC164086.1-201ENSMUST00000221038 289 ntBASIC6.44□□□□□ -1.38
Trim35Q8C006 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Trim35Q8C006 AC159267.1-201ENSMUST00000226702 678 ntBASIC6.44□□□□□ -1.38
Trim35Q8C006 Gm24166-201ENSMUST00000082724 135 ntBASIC6.44□□□□□ -1.38
Trim35Q8C006 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Trim35Q8C006 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim35Q8C006 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Trim35Q8C006 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim35Q8C006 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Trim35Q8C006 Gm44039-201ENSMUST00000204192 2246 ntBASIC6.44□□□□□ -1.38
Trim35Q8C006 Naip3-201ENSMUST00000118082 4208 ntBASIC6.43□□□□□ -1.38
Trim35Q8C006 Gm42992-201ENSMUST00000197043 6836 ntBASIC6.43□□□□□ -1.38
Trim35Q8C006 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim35Q8C006 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim35Q8C006 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Trim35Q8C006 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Trim35Q8C006 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim35Q8C006 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC6.43□□□□□ -1.38
Trim35Q8C006 Gm22284-201ENSMUST00000104132 132 ntBASIC6.43□□□□□ -1.38
Trim35Q8C006 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC6.43□□□□□ -1.38
Trim35Q8C006 Gm12897-201ENSMUST00000120341 250 ntBASIC6.43□□□□□ -1.38
Trim35Q8C006 Gm22986-201ENSMUST00000122753 130 ntBASIC6.43□□□□□ -1.38
Trim35Q8C006 Gm26360-201ENSMUST00000158872 103 ntBASIC6.43□□□□□ -1.38
Trim35Q8C006 Mir6348-201ENSMUST00000183804 120 ntBASIC6.43□□□□□ -1.38
Trim35Q8C006 Mir8106-201ENSMUST00000184520 139 ntBASIC6.43□□□□□ -1.38
Trim35Q8C006 Gm37281-201ENSMUST00000192412 439 ntBASIC6.43□□□□□ -1.38
Trim35Q8C006 Gm45006-201ENSMUST00000206078 690 ntBASIC6.43□□□□□ -1.38
Trim35Q8C006 CT009696.2-201ENSMUST00000216668 432 ntBASIC6.43□□□□□ -1.38
Trim35Q8C006 Gm18586-201ENSMUST00000217265 518 ntBASIC6.43□□□□□ -1.38
Trim35Q8C006 AC027184.1-201ENSMUST00000226991 424 ntBASIC6.43□□□□□ -1.38
Trim35Q8C006 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
Trim35Q8C006 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim35Q8C006 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Trim35Q8C006 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim35Q8C006 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Trim35Q8C006 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Trim35Q8C006 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
Trim35Q8C006 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Trim35Q8C006 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim35Q8C006 Gm37248-201ENSMUST00000193576 3174 ntBASIC6.43□□□□□ -1.38
Trim35Q8C006 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
Trim35Q8C006 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Trim35Q8C006 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Trim35Q8C006 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Trim35Q8C006 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC6.42□□□□□ -1.38
Trim35Q8C006 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Trim35Q8C006 Gm45854-201ENSMUST00000211857 3488 ntBASIC6.42□□□□□ -1.38
Trim35Q8C006 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC6.42□□□□□ -1.38
Trim35Q8C006 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC6.42□□□□□ -1.38
Trim35Q8C006 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Trim35Q8C006 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC6.42□□□□□ -1.38
Trim35Q8C006 Snord89-201ENSMUST00000104516 110 ntBASIC6.42□□□□□ -1.38
Trim35Q8C006 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC6.42□□□□□ -1.38
Trim35Q8C006 Gm22031-201ENSMUST00000116945 126 ntBASIC6.42□□□□□ -1.38
Trim35Q8C006 Gm12568-201ENSMUST00000117362 624 ntBASIC6.42□□□□□ -1.38
Trim35Q8C006 Gm15289-201ENSMUST00000117793 244 ntBASIC6.42□□□□□ -1.38
Trim35Q8C006 Gm24593-201ENSMUST00000122507 106 ntBASIC6.42□□□□□ -1.38
Trim35Q8C006 Gm25176-201ENSMUST00000122640 125 ntBASIC6.42□□□□□ -1.38
Trim35Q8C006 Mir1953-201ENSMUST00000157866 89 ntBASIC6.42□□□□□ -1.38
Trim35Q8C006 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC6.42□□□□□ -1.38
Trim35Q8C006 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC6.42□□□□□ -1.38
Trim35Q8C006 Gm4152-201ENSMUST00000172675 259 ntBASIC6.42□□□□□ -1.38
Trim35Q8C006 Gm27970-201ENSMUST00000184854 407 ntBASIC6.42□□□□□ -1.38
Trim35Q8C006 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC6.42□□□□□ -1.38
Trim35Q8C006 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Trim35Q8C006 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC6.42□□□□□ -1.38
Trim35Q8C006 Gm44374-201ENSMUST00000199821 140 ntBASIC6.42□□□□□ -1.38
Trim35Q8C006 Gm44294-201ENSMUST00000205090 728 ntBASIC6.42□□□□□ -1.38
Trim35Q8C006 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Trim35Q8C006 AC154262.1-201ENSMUST00000225976 286 ntBASIC6.42□□□□□ -1.38
Trim35Q8C006 AC158750.1-201ENSMUST00000226163 634 ntBASIC6.42□□□□□ -1.38
Trim35Q8C006 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Trim35Q8C006 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms