Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Mir6406-201ENSMUST00000183592 120 ntBASIC2.83□□□□□ -1.96
Scn10aQ6QIY3 Gm44059-201ENSMUST00000204048 351 ntBASIC2.83□□□□□ -1.96
Scn10aQ6QIY3 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC2.83□□□□□ -1.96
Scn10aQ6QIY3 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
Scn10aQ6QIY3 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Scn10aQ6QIY3 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
Scn10aQ6QIY3 Mir322-201ENSMUST00000083484 95 ntBASIC2.83□□□□□ -1.96
Scn10aQ6QIY3 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Scn10aQ6QIY3 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.83□□□□□ -1.96
Scn10aQ6QIY3 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Scn10aQ6QIY3 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Scn10aQ6QIY3 Gm44846-201ENSMUST00000207127 3243 ntBASIC2.83□□□□□ -1.96
Scn10aQ6QIY3 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Scn10aQ6QIY3 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC2.82□□□□□ -1.96
Scn10aQ6QIY3 Gm22345-201ENSMUST00000122644 107 ntBASIC2.82□□□□□ -1.96
Scn10aQ6QIY3 Gm20542-201ENSMUST00000174582 372 ntBASIC2.82□□□□□ -1.96
Scn10aQ6QIY3 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC2.82□□□□□ -1.96
Scn10aQ6QIY3 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC2.82□□□□□ -1.96
Scn10aQ6QIY3 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC2.82□□□□□ -1.96
Scn10aQ6QIY3 Gm37989-201ENSMUST00000195202 803 ntBASIC2.82□□□□□ -1.96
Scn10aQ6QIY3 Gm44349-201ENSMUST00000197048 123 ntBASIC2.82□□□□□ -1.96
Scn10aQ6QIY3 Gm22897-201ENSMUST00000197860 128 ntBASIC2.82□□□□□ -1.96
Scn10aQ6QIY3 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Scn10aQ6QIY3 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Scn10aQ6QIY3 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Scn10aQ6QIY3 Gm14589-201ENSMUST00000121640 727 ntBASIC2.81□□□□□ -1.96
Scn10aQ6QIY3 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC2.81□□□□□ -1.96
Scn10aQ6QIY3 Gm23152-201ENSMUST00000175322 116 ntBASIC2.81□□□□□ -1.96
Scn10aQ6QIY3 Gm25470-201ENSMUST00000175576 111 ntBASIC2.81□□□□□ -1.96
Scn10aQ6QIY3 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Scn10aQ6QIY3 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC2.81□□□□□ -1.96
Scn10aQ6QIY3 Gm43587-201ENSMUST00000199590 204 ntBASIC2.81□□□□□ -1.96
Scn10aQ6QIY3 Gm18327-201ENSMUST00000202426 830 ntBASIC2.81□□□□□ -1.96
Scn10aQ6QIY3 Gm19237-201ENSMUST00000205036 1132 ntBASIC2.81□□□□□ -1.96
Scn10aQ6QIY3 Gm18423-201ENSMUST00000205144 1074 ntBASIC2.81□□□□□ -1.96
Scn10aQ6QIY3 Gm44715-201ENSMUST00000209049 3839 ntBASIC2.81□□□□□ -1.96
Scn10aQ6QIY3 AC129323.1-201ENSMUST00000216733 470 ntBASIC2.81□□□□□ -1.96
Scn10aQ6QIY3 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Scn10aQ6QIY3 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Scn10aQ6QIY3 Gm21379-201ENSMUST00000179772 1955 ntBASIC2.81□□□□□ -1.96
Scn10aQ6QIY3 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC2.81□□□□□ -1.96
Scn10aQ6QIY3 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Scn10aQ6QIY3 Gm25094-201ENSMUST00000103992 131 ntBASIC2.81□□□□□ -1.96
Scn10aQ6QIY3 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
Scn10aQ6QIY3 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC2.81□□□□□ -1.96
Scn10aQ6QIY3 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Scn10aQ6QIY3 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC2.81□□□□□ -1.96
Scn10aQ6QIY3 Gm37934-201ENSMUST00000192902 402 ntBASIC2.81□□□□□ -1.96
Scn10aQ6QIY3 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC2.81□□□□□ -1.96
Scn10aQ6QIY3 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC2.81□□□□□ -1.96
Scn10aQ6QIY3 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.81□□□□□ -1.96
Scn10aQ6QIY3 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC2.81□□□□□ -1.96
Scn10aQ6QIY3 Gm23460-201ENSMUST00000083258 109 ntBASIC2.81□□□□□ -1.96
Scn10aQ6QIY3 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Scn10aQ6QIY3 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Scn10aQ6QIY3 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Scn10aQ6QIY3 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Scn10aQ6QIY3 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.8□□□□□ -1.96
Scn10aQ6QIY3 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC2.8□□□□□ -1.96
Scn10aQ6QIY3 Snord53-201ENSMUST00000175146 78 ntBASIC2.8□□□□□ -1.96
Scn10aQ6QIY3 Gm27044-201ENSMUST00000183033 796 ntBASIC2.8□□□□□ -1.96
Scn10aQ6QIY3 Gm29330-201ENSMUST00000190032 699 ntBASIC2.8□□□□□ -1.96
Scn10aQ6QIY3 Gm28098-201ENSMUST00000191361 699 ntBASIC2.8□□□□□ -1.96
Scn10aQ6QIY3 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Scn10aQ6QIY3 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.8□□□□□ -1.96
Scn10aQ6QIY3 Gm10794-201ENSMUST00000099624 207 ntBASIC2.8□□□□□ -1.96
Scn10aQ6QIY3 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.8□□□□□ -1.96
Scn10aQ6QIY3 Gm13471-201ENSMUST00000122057 433 ntBASIC2.8□□□□□ -1.96
Scn10aQ6QIY3 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC2.8□□□□□ -1.96
Scn10aQ6QIY3 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC2.8□□□□□ -1.96
Scn10aQ6QIY3 Gm27163-201ENSMUST00000184767 409 ntBASIC2.8□□□□□ -1.96
Scn10aQ6QIY3 Mir142-201ENSMUST00000198092 64 ntBASIC2.8□□□□□ -1.96
Scn10aQ6QIY3 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.8□□□□□ -1.96
Scn10aQ6QIY3 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.8□□□□□ -1.96
Scn10aQ6QIY3 Gm14429-201ENSMUST00000121881 2024 ntBASIC2.79□□□□□ -1.96
Scn10aQ6QIY3 Snora81-201ENSMUST00000157310 178 ntBASIC2.79□□□□□ -1.96
Scn10aQ6QIY3 Gm23548-201ENSMUST00000158963 106 ntBASIC2.79□□□□□ -1.96
Scn10aQ6QIY3 Gm22192-201ENSMUST00000175128 85 ntBASIC2.79□□□□□ -1.96
Scn10aQ6QIY3 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC2.79□□□□□ -1.96
Scn10aQ6QIY3 Gm46389-201ENSMUST00000223199 392 ntBASIC2.79□□□□□ -1.96
Scn10aQ6QIY3 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC2.79□□□□□ -1.96
Scn10aQ6QIY3 Gm25632-201ENSMUST00000083112 85 ntBASIC2.79□□□□□ -1.96
Scn10aQ6QIY3 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.79□□□□□ -1.96
Scn10aQ6QIY3 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.79□□□□□ -1.96
Scn10aQ6QIY3 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.79□□□□□ -1.96
Scn10aQ6QIY3 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
Scn10aQ6QIY3 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Scn10aQ6QIY3 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Scn10aQ6QIY3 Gm24541-201ENSMUST00000103871 96 ntBASIC2.78□□□□□ -1.96
Scn10aQ6QIY3 Gm13439-201ENSMUST00000117541 409 ntBASIC2.78□□□□□ -1.96
Scn10aQ6QIY3 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC2.78□□□□□ -1.96
Scn10aQ6QIY3 Gm24666-201ENSMUST00000158937 167 ntBASIC2.78□□□□□ -1.96
Scn10aQ6QIY3 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Scn10aQ6QIY3 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC2.78□□□□□ -1.96
Scn10aQ6QIY3 Mir6363-201ENSMUST00000184880 114 ntBASIC2.78□□□□□ -1.96
Scn10aQ6QIY3 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Scn10aQ6QIY3 Gm36247-201ENSMUST00000211834 285 ntBASIC2.78□□□□□ -1.96
Scn10aQ6QIY3 Gm18346-201ENSMUST00000216782 325 ntBASIC2.78□□□□□ -1.96
Scn10aQ6QIY3 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Scn10aQ6QIY3 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms