Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Sh3rf1Q69ZI1 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Sh3rf1Q69ZI1 Gm23948-201ENSMUST00000104030 132 ntBASIC4.91□□□□□ -1.62
Sh3rf1Q69ZI1 Gm13491-201ENSMUST00000118267 235 ntBASIC4.91□□□□□ -1.62
Sh3rf1Q69ZI1 Gm13932-201ENSMUST00000120873 610 ntBASIC4.91□□□□□ -1.62
Sh3rf1Q69ZI1 Gm15986-201ENSMUST00000122153 400 ntBASIC4.91□□□□□ -1.62
Sh3rf1Q69ZI1 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC4.91□□□□□ -1.62
Sh3rf1Q69ZI1 Gm26153-201ENSMUST00000157433 127 ntBASIC4.91□□□□□ -1.62
Sh3rf1Q69ZI1 Gm23993-201ENSMUST00000157478 144 ntBASIC4.91□□□□□ -1.62
Sh3rf1Q69ZI1 Gm24546-201ENSMUST00000158652 102 ntBASIC4.91□□□□□ -1.62
Sh3rf1Q69ZI1 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Sh3rf1Q69ZI1 Gm24713-201ENSMUST00000178850 107 ntBASIC4.91□□□□□ -1.62
Sh3rf1Q69ZI1 Gm25448-201ENSMUST00000180065 107 ntBASIC4.91□□□□□ -1.62
Sh3rf1Q69ZI1 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC4.91□□□□□ -1.62
Sh3rf1Q69ZI1 Mir6963-201ENSMUST00000183535 71 ntBASIC4.91□□□□□ -1.62
Sh3rf1Q69ZI1 Mir6926-201ENSMUST00000184562 68 ntBASIC4.91□□□□□ -1.62
Sh3rf1Q69ZI1 Gm28399-201ENSMUST00000186221 318 ntBASIC4.91□□□□□ -1.62
Sh3rf1Q69ZI1 Gm28572-201ENSMUST00000187444 318 ntBASIC4.91□□□□□ -1.62
Sh3rf1Q69ZI1 Gm29350-201ENSMUST00000189141 541 ntBASIC4.91□□□□□ -1.62
Sh3rf1Q69ZI1 Gm29365-201ENSMUST00000189461 699 ntBASIC4.91□□□□□ -1.62
Sh3rf1Q69ZI1 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Sh3rf1Q69ZI1 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC4.91□□□□□ -1.62
Sh3rf1Q69ZI1 Gm34224-201ENSMUST00000204606 364 ntBASIC4.91□□□□□ -1.62
Sh3rf1Q69ZI1 Gm32536-201ENSMUST00000205209 445 ntBASIC4.91□□□□□ -1.62
Sh3rf1Q69ZI1 Gm44859-201ENSMUST00000207831 94 ntBASIC4.91□□□□□ -1.62
Sh3rf1Q69ZI1 Gm5373-201ENSMUST00000212113 1050 ntBASIC4.91□□□□□ -1.62
Sh3rf1Q69ZI1 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Sh3rf1Q69ZI1 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Sh3rf1Q69ZI1 Gm23302-201ENSMUST00000082710 100 ntBASIC4.91□□□□□ -1.62
Sh3rf1Q69ZI1 Gm43065-201ENSMUST00000198971 2092 ntBASIC4.91□□□□□ -1.62
Sh3rf1Q69ZI1 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Sh3rf1Q69ZI1 Gm45129-201ENSMUST00000208444 2224 ntBASIC4.91□□□□□ -1.62
Sh3rf1Q69ZI1 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.62
Sh3rf1Q69ZI1 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Sh3rf1Q69ZI1 Gm37588-201ENSMUST00000195024 2496 ntBASIC4.9□□□□□ -1.62
Sh3rf1Q69ZI1 Gm8989-201ENSMUST00000184782 7275 ntBASIC4.9□□□□□ -1.62
Sh3rf1Q69ZI1 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
Sh3rf1Q69ZI1 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Sh3rf1Q69ZI1 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Sh3rf1Q69ZI1 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Sh3rf1Q69ZI1 Gm14628-201ENSMUST00000117508 635 ntBASIC4.9□□□□□ -1.63
Sh3rf1Q69ZI1 Gm11923-201ENSMUST00000118135 508 ntBASIC4.9□□□□□ -1.63
Sh3rf1Q69ZI1 Gm11325-201ENSMUST00000119967 469 ntBASIC4.9□□□□□ -1.63
Sh3rf1Q69ZI1 Gm15120-201ENSMUST00000120602 301 ntBASIC4.9□□□□□ -1.63
Sh3rf1Q69ZI1 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Sh3rf1Q69ZI1 Gm24441-201ENSMUST00000157235 281 ntBASIC4.9□□□□□ -1.63
Sh3rf1Q69ZI1 Gm23277-201ENSMUST00000157914 136 ntBASIC4.9□□□□□ -1.63
Sh3rf1Q69ZI1 Gm26041-201ENSMUST00000158148 108 ntBASIC4.9□□□□□ -1.63
Sh3rf1Q69ZI1 Ear-ps4-201ENSMUST00000166834 450 ntBASIC4.9□□□□□ -1.63
Sh3rf1Q69ZI1 Gm17152-201ENSMUST00000172430 535 ntBASIC4.9□□□□□ -1.63
Sh3rf1Q69ZI1 Mir3058-201ENSMUST00000175126 91 ntBASIC4.9□□□□□ -1.63
Sh3rf1Q69ZI1 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC4.9□□□□□ -1.63
Sh3rf1Q69ZI1 Gm37701-201ENSMUST00000192947 1100 ntBASIC4.9□□□□□ -1.63
Sh3rf1Q69ZI1 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC4.9□□□□□ -1.63
Sh3rf1Q69ZI1 Gm38053-201ENSMUST00000193938 160 ntBASIC4.9□□□□□ -1.63
Sh3rf1Q69ZI1 BX530055.1-201ENSMUST00000197285 122 ntBASIC4.9□□□□□ -1.63
Sh3rf1Q69ZI1 Gm43214-201ENSMUST00000199242 352 ntBASIC4.9□□□□□ -1.63
Sh3rf1Q69ZI1 Gm35931-201ENSMUST00000203931 448 ntBASIC4.9□□□□□ -1.63
Sh3rf1Q69ZI1 Gm44259-201ENSMUST00000204996 298 ntBASIC4.9□□□□□ -1.63
Sh3rf1Q69ZI1 Gm18306-201ENSMUST00000207338 569 ntBASIC4.9□□□□□ -1.63
Sh3rf1Q69ZI1 Gm45207-201ENSMUST00000207469 145 ntBASIC4.9□□□□□ -1.63
Sh3rf1Q69ZI1 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Sh3rf1Q69ZI1 AC156559.1-201ENSMUST00000224158 222 ntBASIC4.9□□□□□ -1.63
Sh3rf1Q69ZI1 AC117656.3-202ENSMUST00000225842 1055 ntBASIC4.9□□□□□ -1.63
Sh3rf1Q69ZI1 AC123656.2-201ENSMUST00000226726 227 ntBASIC4.9□□□□□ -1.63
Sh3rf1Q69ZI1 AC131178.1-201ENSMUST00000228649 492 ntBASIC4.9□□□□□ -1.63
Sh3rf1Q69ZI1 Gm22577-201ENSMUST00000083731 109 ntBASIC4.9□□□□□ -1.63
Sh3rf1Q69ZI1 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Sh3rf1Q69ZI1 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Sh3rf1Q69ZI1 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Sh3rf1Q69ZI1 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Sh3rf1Q69ZI1 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Sh3rf1Q69ZI1 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Sh3rf1Q69ZI1 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Sh3rf1Q69ZI1 Gm45853-201ENSMUST00000212310 3171 ntBASIC4.9□□□□□ -1.63
Sh3rf1Q69ZI1 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.89□□□□□ -1.63
Sh3rf1Q69ZI1 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Sh3rf1Q69ZI1 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.89□□□□□ -1.63
Sh3rf1Q69ZI1 Gm37970-201ENSMUST00000193865 1732 ntBASIC4.89□□□□□ -1.63
Sh3rf1Q69ZI1 Gm36298-201ENSMUST00000223394 1732 ntBASIC4.89□□□□□ -1.63
Sh3rf1Q69ZI1 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Sh3rf1Q69ZI1 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC4.89□□□□□ -1.63
Sh3rf1Q69ZI1 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Sh3rf1Q69ZI1 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Sh3rf1Q69ZI1 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Sh3rf1Q69ZI1 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Sh3rf1Q69ZI1 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
Sh3rf1Q69ZI1 Gm14469-201ENSMUST00000118363 202 ntBASIC4.89□□□□□ -1.63
Sh3rf1Q69ZI1 Gm14591-201ENSMUST00000120407 518 ntBASIC4.89□□□□□ -1.63
Sh3rf1Q69ZI1 Gm13149-201ENSMUST00000122071 339 ntBASIC4.89□□□□□ -1.63
Sh3rf1Q69ZI1 Gm12854-201ENSMUST00000128518 297 ntBASIC4.89□□□□□ -1.63
Sh3rf1Q69ZI1 Gm8214-201ENSMUST00000172123 351 ntBASIC4.89□□□□□ -1.63
Sh3rf1Q69ZI1 Gm25749-201ENSMUST00000175485 111 ntBASIC4.89□□□□□ -1.63
Sh3rf1Q69ZI1 Gm20630-201ENSMUST00000177387 551 ntBASIC4.89□□□□□ -1.63
Sh3rf1Q69ZI1 Gm26622-201ENSMUST00000180520 298 ntBASIC4.89□□□□□ -1.63
Sh3rf1Q69ZI1 Gm28468-201ENSMUST00000188536 615 ntBASIC4.89□□□□□ -1.63
Sh3rf1Q69ZI1 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC4.89□□□□□ -1.63
Sh3rf1Q69ZI1 Gm28769-201ENSMUST00000190176 615 ntBASIC4.89□□□□□ -1.63
Sh3rf1Q69ZI1 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC4.89□□□□□ -1.63
Sh3rf1Q69ZI1 Gm9442-201ENSMUST00000194242 319 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 106.5 ms