Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm28263-201ENSMUST00000185884 400 ntBASIC4.95□□□□□ -1.62
Trim28Q62318 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.95□□□□□ -1.62
Trim28Q62318 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC4.95□□□□□ -1.62
Trim28Q62318 Gm33354-201ENSMUST00000195448 906 ntBASIC4.95□□□□□ -1.62
Trim28Q62318 Gm19237-201ENSMUST00000205036 1132 ntBASIC4.95□□□□□ -1.62
Trim28Q62318 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC4.95□□□□□ -1.62
Trim28Q62318 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC4.95□□□□□ -1.62
Trim28Q62318 Gm19441-201ENSMUST00000221545 330 ntBASIC4.95□□□□□ -1.62
Trim28Q62318 Ear14-201ENSMUST00000049559 468 ntBASIC4.95□□□□□ -1.62
Trim28Q62318 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Trim28Q62318 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Trim28Q62318 n-R5s94-201ENSMUST00000082573 119 ntBASIC4.95□□□□□ -1.62
Trim28Q62318 Snora7a-201ENSMUST00000082629 140 ntBASIC4.95□□□□□ -1.62
Trim28Q62318 Gm24144-201ENSMUST00000082632 111 ntBASIC4.95□□□□□ -1.62
Trim28Q62318 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Trim28Q62318 Gm43883-201ENSMUST00000204002 3750 ntBASIC4.95□□□□□ -1.62
Trim28Q62318 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC4.95□□□□□ -1.62
Trim28Q62318 Gm44860-201ENSMUST00000208473 2346 ntBASIC4.95□□□□□ -1.62
Trim28Q62318 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC4.95□□□□□ -1.62
Trim28Q62318 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trim28Q62318 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trim28Q62318 Gm44625-201ENSMUST00000207838 1561 ntBASIC4.95□□□□□ -1.62
Trim28Q62318 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
Trim28Q62318 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Trim28Q62318 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Trim28Q62318 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Trim28Q62318 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.94□□□□□ -1.62
Trim28Q62318 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC4.94□□□□□ -1.62
Trim28Q62318 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Trim28Q62318 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Trim28Q62318 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Trim28Q62318 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Trim28Q62318 Gm22479-201ENSMUST00000122566 81 ntBASIC4.94□□□□□ -1.62
Trim28Q62318 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC4.94□□□□□ -1.62
Trim28Q62318 Gm23781-201ENSMUST00000157940 308 ntBASIC4.94□□□□□ -1.62
Trim28Q62318 Gm26005-201ENSMUST00000158802 134 ntBASIC4.94□□□□□ -1.62
Trim28Q62318 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC4.94□□□□□ -1.62
Trim28Q62318 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Trim28Q62318 Gm44468-201ENSMUST00000199516 105 ntBASIC4.94□□□□□ -1.62
Trim28Q62318 Gm44611-201ENSMUST00000207507 355 ntBASIC4.94□□□□□ -1.62
Trim28Q62318 Gm45189-201ENSMUST00000208567 363 ntBASIC4.94□□□□□ -1.62
Trim28Q62318 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC4.94□□□□□ -1.62
Trim28Q62318 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Trim28Q62318 Gm45530-201ENSMUST00000211658 225 ntBASIC4.94□□□□□ -1.62
Trim28Q62318 Gm18903-201ENSMUST00000215343 480 ntBASIC4.94□□□□□ -1.62
Trim28Q62318 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC4.94□□□□□ -1.62
Trim28Q62318 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC4.94□□□□□ -1.62
Trim28Q62318 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC4.94□□□□□ -1.62
Trim28Q62318 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Trim28Q62318 AC091783.5-201ENSMUST00000224928 671 ntBASIC4.94□□□□□ -1.62
Trim28Q62318 AC115291.2-201ENSMUST00000228335 437 ntBASIC4.94□□□□□ -1.62
Trim28Q62318 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Trim28Q62318 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC4.94□□□□□ -1.62
Trim28Q62318 Mir421-201ENSMUST00000083575 76 ntBASIC4.94□□□□□ -1.62
Trim28Q62318 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
Trim28Q62318 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Trim28Q62318 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
Trim28Q62318 AC160115.1-201ENSMUST00000224678 1574 ntBASIC4.94□□□□□ -1.62
Trim28Q62318 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Trim28Q62318 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
Trim28Q62318 Gm45884-201ENSMUST00000209540 3416 ntBASIC4.94□□□□□ -1.62
Trim28Q62318 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Trim28Q62318 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Trim28Q62318 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.93□□□□□ -1.62
Trim28Q62318 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Trim28Q62318 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Trim28Q62318 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Trim28Q62318 Gm24935-201ENSMUST00000103770 110 ntBASIC4.93□□□□□ -1.62
Trim28Q62318 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Trim28Q62318 Gm24275-201ENSMUST00000116780 146 ntBASIC4.93□□□□□ -1.62
Trim28Q62318 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Trim28Q62318 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC4.93□□□□□ -1.62
Trim28Q62318 Gm22320-201ENSMUST00000157149 312 ntBASIC4.93□□□□□ -1.62
Trim28Q62318 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Trim28Q62318 Gm17929-201ENSMUST00000186851 627 ntBASIC4.93□□□□□ -1.62
Trim28Q62318 Gm9775-201ENSMUST00000189402 331 ntBASIC4.93□□□□□ -1.62
Trim28Q62318 Gm38008-201ENSMUST00000195333 518 ntBASIC4.93□□□□□ -1.62
Trim28Q62318 Gm8874-201ENSMUST00000196826 286 ntBASIC4.93□□□□□ -1.62
Trim28Q62318 Gm43155-201ENSMUST00000202661 494 ntBASIC4.93□□□□□ -1.62
Trim28Q62318 Gm44475-201ENSMUST00000204041 424 ntBASIC4.93□□□□□ -1.62
Trim28Q62318 AC134577.1-201ENSMUST00000227572 295 ntBASIC4.93□□□□□ -1.62
Trim28Q62318 Gm22810-201ENSMUST00000082741 158 ntBASIC4.93□□□□□ -1.62
Trim28Q62318 Gm25480-201ENSMUST00000083217 133 ntBASIC4.93□□□□□ -1.62
Trim28Q62318 Snord15a-201ENSMUST00000083888 148 ntBASIC4.93□□□□□ -1.62
Trim28Q62318 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.93□□□□□ -1.62
Trim28Q62318 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.93□□□□□ -1.62
Trim28Q62318 Gm36962-201ENSMUST00000192114 1761 ntBASIC4.93□□□□□ -1.62
Trim28Q62318 Gm9496-201ENSMUST00000191295 1601 ntBASIC4.93□□□□□ -1.62
Trim28Q62318 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Trim28Q62318 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
Trim28Q62318 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim28Q62318 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim28Q62318 Gm6215-201ENSMUST00000119297 1386 ntBASIC4.92□□□□□ -1.62
Trim28Q62318 Gm7905-201ENSMUST00000119933 1386 ntBASIC4.92□□□□□ -1.62
Trim28Q62318 Gm6207-201ENSMUST00000120075 1386 ntBASIC4.92□□□□□ -1.62
Trim28Q62318 Gm6228-201ENSMUST00000178856 1386 ntBASIC4.92□□□□□ -1.62
Trim28Q62318 Gm6221-201ENSMUST00000180064 1386 ntBASIC4.92□□□□□ -1.62
Trim28Q62318 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Trim28Q62318 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
Trim28Q62318 AC160130.1-201ENSMUST00000220734 2735 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms