Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm5248-201ENSMUST00000186108 4046 ntBASIC4.28□□□□□ -1.72
Foxc1Q61572 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Foxc1Q61572 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC4.28□□□□□ -1.72
Foxc1Q61572 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Foxc1Q61572 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Foxc1Q61572 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Foxc1Q61572 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Foxc1Q61572 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Foxc1Q61572 Gm37897-201ENSMUST00000192613 3561 ntBASIC4.28□□□□□ -1.72
Foxc1Q61572 Gm35629-201ENSMUST00000209684 2241 ntBASIC4.27□□□□□ -1.73
Foxc1Q61572 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
Foxc1Q61572 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
Foxc1Q61572 Gm37766-201ENSMUST00000192244 2567 ntBASIC4.27□□□□□ -1.73
Foxc1Q61572 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Foxc1Q61572 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Foxc1Q61572 Gm43857-201ENSMUST00000200343 3079 ntBASIC4.27□□□□□ -1.73
Foxc1Q61572 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC4.27□□□□□ -1.73
Foxc1Q61572 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
Foxc1Q61572 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Foxc1Q61572 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Foxc1Q61572 Gm14894-201ENSMUST00000117170 270 ntBASIC4.27□□□□□ -1.73
Foxc1Q61572 Gm14748-201ENSMUST00000119819 411 ntBASIC4.27□□□□□ -1.73
Foxc1Q61572 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC4.27□□□□□ -1.73
Foxc1Q61572 Gm13210-201ENSMUST00000121483 273 ntBASIC4.27□□□□□ -1.73
Foxc1Q61572 Gm15065-201ENSMUST00000121699 273 ntBASIC4.27□□□□□ -1.73
Foxc1Q61572 Gm23184-201ENSMUST00000122594 131 ntBASIC4.27□□□□□ -1.73
Foxc1Q61572 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Foxc1Q61572 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Foxc1Q61572 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC4.27□□□□□ -1.73
Foxc1Q61572 Gm22654-201ENSMUST00000157874 105 ntBASIC4.27□□□□□ -1.73
Foxc1Q61572 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC4.27□□□□□ -1.73
Foxc1Q61572 Gm28385-201ENSMUST00000185671 292 ntBASIC4.27□□□□□ -1.73
Foxc1Q61572 Gm28627-201ENSMUST00000186141 453 ntBASIC4.27□□□□□ -1.73
Foxc1Q61572 Gm28623-201ENSMUST00000187219 192 ntBASIC4.27□□□□□ -1.73
Foxc1Q61572 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Foxc1Q61572 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC4.27□□□□□ -1.73
Foxc1Q61572 Gm37609-201ENSMUST00000191778 678 ntBASIC4.27□□□□□ -1.73
Foxc1Q61572 Gm18956-201ENSMUST00000192857 480 ntBASIC4.27□□□□□ -1.73
Foxc1Q61572 Gm37449-201ENSMUST00000193016 270 ntBASIC4.27□□□□□ -1.73
Foxc1Q61572 Gm37358-201ENSMUST00000195492 479 ntBASIC4.27□□□□□ -1.73
Foxc1Q61572 Gm18658-201ENSMUST00000195558 270 ntBASIC4.27□□□□□ -1.73
Foxc1Q61572 Gm42830-201ENSMUST00000196642 313 ntBASIC4.27□□□□□ -1.73
Foxc1Q61572 Snord80-202ENSMUST00000199023 77 ntBASIC4.27□□□□□ -1.73
Foxc1Q61572 Gm42886-201ENSMUST00000199214 466 ntBASIC4.27□□□□□ -1.73
Foxc1Q61572 n-TStga1-201ENSMUST00000199903 109 ntBASIC4.27□□□□□ -1.73
Foxc1Q61572 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC4.27□□□□□ -1.73
Foxc1Q61572 Gm34224-201ENSMUST00000204606 364 ntBASIC4.27□□□□□ -1.73
Foxc1Q61572 AC124562.1-201ENSMUST00000224673 337 ntBASIC4.27□□□□□ -1.73
Foxc1Q61572 AC151902.2-201ENSMUST00000226419 301 ntBASIC4.27□□□□□ -1.73
Foxc1Q61572 CT030238.1-201ENSMUST00000228393 442 ntBASIC4.27□□□□□ -1.73
Foxc1Q61572 Snora44-201ENSMUST00000082670 129 ntBASIC4.27□□□□□ -1.73
Foxc1Q61572 Gm26163-201ENSMUST00000083792 178 ntBASIC4.27□□□□□ -1.73
Foxc1Q61572 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Foxc1Q61572 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC4.27□□□□□ -1.73
Foxc1Q61572 Gm36944-201ENSMUST00000192257 2759 ntBASIC4.27□□□□□ -1.73
Foxc1Q61572 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Foxc1Q61572 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Foxc1Q61572 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Foxc1Q61572 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Foxc1Q61572 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC4.27□□□□□ -1.73
Foxc1Q61572 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Foxc1Q61572 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Foxc1Q61572 AC115289.2-201ENSMUST00000223836 2803 ntBASIC4.27□□□□□ -1.73
Foxc1Q61572 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Foxc1Q61572 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
Foxc1Q61572 AC158805.1-201ENSMUST00000218197 2631 ntBASIC4.26□□□□□ -1.73
Foxc1Q61572 Gm26984-201ENSMUST00000182345 3510 ntBASIC4.26□□□□□ -1.73
Foxc1Q61572 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Foxc1Q61572 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
Foxc1Q61572 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Foxc1Q61572 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Foxc1Q61572 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC4.26□□□□□ -1.73
Foxc1Q61572 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC4.26□□□□□ -1.73
Foxc1Q61572 Gm13435-201ENSMUST00000120111 1023 ntBASIC4.26□□□□□ -1.73
Foxc1Q61572 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC4.26□□□□□ -1.73
Foxc1Q61572 Gm12110-201ENSMUST00000121601 579 ntBASIC4.26□□□□□ -1.73
Foxc1Q61572 Gm22613-201ENSMUST00000122679 292 ntBASIC4.26□□□□□ -1.73
Foxc1Q61572 Gm23250-201ENSMUST00000157444 267 ntBASIC4.26□□□□□ -1.73
Foxc1Q61572 Gm24131-201ENSMUST00000158539 107 ntBASIC4.26□□□□□ -1.73
Foxc1Q61572 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
Foxc1Q61572 Gm22932-201ENSMUST00000175510 72 ntBASIC4.26□□□□□ -1.73
Foxc1Q61572 Mir6952-201ENSMUST00000185092 61 ntBASIC4.26□□□□□ -1.73
Foxc1Q61572 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC4.26□□□□□ -1.73
Foxc1Q61572 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Foxc1Q61572 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC4.26□□□□□ -1.73
Foxc1Q61572 AC157822.1-201ENSMUST00000196643 80 ntBASIC4.26□□□□□ -1.73
Foxc1Q61572 Igkv4-56-201ENSMUST00000198436 349 ntBASIC4.26□□□□□ -1.73
Foxc1Q61572 Gm44520-201ENSMUST00000205447 802 ntBASIC4.26□□□□□ -1.73
Foxc1Q61572 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC4.26□□□□□ -1.73
Foxc1Q61572 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC4.26□□□□□ -1.73
Foxc1Q61572 AC105958.2-201ENSMUST00000214167 191 ntBASIC4.26□□□□□ -1.73
Foxc1Q61572 AC101945.3-201ENSMUST00000226568 153 ntBASIC4.26□□□□□ -1.73
Foxc1Q61572 AC122320.1-201ENSMUST00000227233 105 ntBASIC4.26□□□□□ -1.73
Foxc1Q61572 Gm26456-201ENSMUST00000082831 111 ntBASIC4.26□□□□□ -1.73
Foxc1Q61572 Gm23456-201ENSMUST00000083335 137 ntBASIC4.26□□□□□ -1.73
Foxc1Q61572 Gm25411-201ENSMUST00000083760 151 ntBASIC4.26□□□□□ -1.73
Foxc1Q61572 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Foxc1Q61572 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Foxc1Q61572 Gm8989-201ENSMUST00000184782 7275 ntBASIC4.26□□□□□ -1.73
Foxc1Q61572 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms