Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Gm13687-201ENSMUST00000119857 282 ntBASIC2.61□□□□□ -1.99
Col11a1Q61245 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.61□□□□□ -1.99
Col11a1Q61245 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.61□□□□□ -1.99
Col11a1Q61245 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Col11a1Q61245 Gm42483-201ENSMUST00000197556 1742 ntBASIC2.61□□□□□ -1.99
Col11a1Q61245 Mir3087-201ENSMUST00000199405 56 ntBASIC2.61□□□□□ -1.99
Col11a1Q61245 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.61□□□□□ -1.99
Col11a1Q61245 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC2.61□□□□□ -1.99
Col11a1Q61245 Gm44060-201ENSMUST00000204440 410 ntBASIC2.61□□□□□ -1.99
Col11a1Q61245 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC2.61□□□□□ -1.99
Col11a1Q61245 AC159246.1-201ENSMUST00000214478 249 ntBASIC2.61□□□□□ -1.99
Col11a1Q61245 AC126554.4-201ENSMUST00000221055 409 ntBASIC2.61□□□□□ -1.99
Col11a1Q61245 AC124729.1-202ENSMUST00000225587 938 ntBASIC2.61□□□□□ -1.99
Col11a1Q61245 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Col11a1Q61245 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Col11a1Q61245 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Col11a1Q61245 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Col11a1Q61245 Gm11414-201ENSMUST00000121795 263 ntBASIC2.61□□□□□ -1.99
Col11a1Q61245 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.61□□□□□ -1.99
Col11a1Q61245 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC2.61□□□□□ -1.99
Col11a1Q61245 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.61□□□□□ -1.99
Col11a1Q61245 Gm24317-201ENSMUST00000178536 107 ntBASIC2.61□□□□□ -1.99
Col11a1Q61245 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
Col11a1Q61245 Gm29657-201ENSMUST00000189807 342 ntBASIC2.61□□□□□ -1.99
Col11a1Q61245 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC2.61□□□□□ -1.99
Col11a1Q61245 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.61□□□□□ -1.99
Col11a1Q61245 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
Col11a1Q61245 Gm5175-202ENSMUST00000219699 529 ntBASIC2.61□□□□□ -1.99
Col11a1Q61245 AC122295.1-201ENSMUST00000223476 388 ntBASIC2.61□□□□□ -1.99
Col11a1Q61245 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC2.61□□□□□ -1.99
Col11a1Q61245 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Col11a1Q61245 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Col11a1Q61245 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Col11a1Q61245 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
Col11a1Q61245 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Col11a1Q61245 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Col11a1Q61245 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC2.6□□□□□ -1.99
Col11a1Q61245 Gm24771-201ENSMUST00000158508 137 ntBASIC2.6□□□□□ -1.99
Col11a1Q61245 Gm24885-201ENSMUST00000158783 270 ntBASIC2.6□□□□□ -1.99
Col11a1Q61245 Gm27330-201ENSMUST00000184689 132 ntBASIC2.6□□□□□ -1.99
Col11a1Q61245 Gm37732-201ENSMUST00000194377 316 ntBASIC2.6□□□□□ -1.99
Col11a1Q61245 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Col11a1Q61245 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Col11a1Q61245 AC118639.1-201ENSMUST00000227204 338 ntBASIC2.6□□□□□ -1.99
Col11a1Q61245 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Col11a1Q61245 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Col11a1Q61245 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Col11a1Q61245 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Col11a1Q61245 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Col11a1Q61245 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Col11a1Q61245 Gm13755-201ENSMUST00000118509 305 ntBASIC2.59□□□□□ -1.99
Col11a1Q61245 Gm13314-201ENSMUST00000118742 335 ntBASIC2.59□□□□□ -1.99
Col11a1Q61245 Gm14804-201ENSMUST00000122322 508 ntBASIC2.59□□□□□ -1.99
Col11a1Q61245 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.59□□□□□ -1.99
Col11a1Q61245 Gm8502-201ENSMUST00000185708 901 ntBASIC2.59□□□□□ -1.99
Col11a1Q61245 Gm21147-201ENSMUST00000186046 913 ntBASIC2.59□□□□□ -1.99
Col11a1Q61245 Gm29534-201ENSMUST00000187328 382 ntBASIC2.59□□□□□ -1.99
Col11a1Q61245 Gm20561-201ENSMUST00000188131 292 ntBASIC2.59□□□□□ -1.99
Col11a1Q61245 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Col11a1Q61245 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.59□□□□□ -1.99
Col11a1Q61245 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.59□□□□□ -1.99
Col11a1Q61245 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC2.59□□□□□ -1.99
Col11a1Q61245 Gm26226-201ENSMUST00000082509 116 ntBASIC2.59□□□□□ -1.99
Col11a1Q61245 Gm22806-201ENSMUST00000082738 136 ntBASIC2.59□□□□□ -1.99
Col11a1Q61245 n-R5s220-201ENSMUST00000082926 120 ntBASIC2.59□□□□□ -1.99
Col11a1Q61245 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Col11a1Q61245 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Col11a1Q61245 Gm15854-201ENSMUST00000118879 808 ntBASIC2.58□□□□□ -2
Col11a1Q61245 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC2.58□□□□□ -2
Col11a1Q61245 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC2.58□□□□□ -2
Col11a1Q61245 Gm7592-201ENSMUST00000160674 627 ntBASIC2.58□□□□□ -2
Col11a1Q61245 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC2.58□□□□□ -2
Col11a1Q61245 Mir8103-201ENSMUST00000183945 107 ntBASIC2.58□□□□□ -2
Col11a1Q61245 Gm19252-201ENSMUST00000204705 305 ntBASIC2.58□□□□□ -2
Col11a1Q61245 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Col11a1Q61245 Gm8031-201ENSMUST00000213430 626 ntBASIC2.58□□□□□ -2
Col11a1Q61245 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC2.58□□□□□ -2
Col11a1Q61245 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Col11a1Q61245 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Col11a1Q61245 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Col11a1Q61245 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Col11a1Q61245 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.58□□□□□ -2
Col11a1Q61245 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.58□□□□□ -2
Col11a1Q61245 Gm37965-201ENSMUST00000195304 1362 ntBASIC2.58□□□□□ -2
Col11a1Q61245 Mir592-201ENSMUST00000102113 96 ntBASIC2.58□□□□□ -2
Col11a1Q61245 Gm15162-201ENSMUST00000119325 283 ntBASIC2.58□□□□□ -2
Col11a1Q61245 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC2.58□□□□□ -2
Col11a1Q61245 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Col11a1Q61245 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC2.58□□□□□ -2
Col11a1Q61245 Gm38332-201ENSMUST00000194189 147 ntBASIC2.58□□□□□ -2
Col11a1Q61245 AC132121.1-201ENSMUST00000220774 332 ntBASIC2.58□□□□□ -2
Col11a1Q61245 CT485608.1-201ENSMUST00000228759 389 ntBASIC2.58□□□□□ -2
Col11a1Q61245 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Col11a1Q61245 Gm18493-201ENSMUST00000192084 1612 ntBASIC2.58□□□□□ -2
Col11a1Q61245 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC2.58□□□□□ -2
Col11a1Q61245 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
Col11a1Q61245 Gm37903-201ENSMUST00000192122 2381 ntBASIC2.57□□□□□ -2
Col11a1Q61245 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.57□□□□□ -2
Col11a1Q61245 Gm12042-201ENSMUST00000120479 301 ntBASIC2.57□□□□□ -2
Col11a1Q61245 Gm23385-201ENSMUST00000158592 295 ntBASIC2.57□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms