Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC6.6□□□□□ -1.35
Scaf1Q5U4C3 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Scaf1Q5U4C3 Gm15603-201ENSMUST00000119252 492 ntBASIC6.6□□□□□ -1.35
Scaf1Q5U4C3 Defb44-ps-201ENSMUST00000126871 219 ntBASIC6.6□□□□□ -1.35
Scaf1Q5U4C3 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Scaf1Q5U4C3 Gm23906-201ENSMUST00000157573 128 ntBASIC6.6□□□□□ -1.35
Scaf1Q5U4C3 Mir1947-201ENSMUST00000158235 85 ntBASIC6.6□□□□□ -1.35
Scaf1Q5U4C3 Gm17072-201ENSMUST00000166673 658 ntBASIC6.6□□□□□ -1.35
Scaf1Q5U4C3 Gm29320-201ENSMUST00000185235 615 ntBASIC6.6□□□□□ -1.35
Scaf1Q5U4C3 Gm29179-202ENSMUST00000186138 615 ntBASIC6.6□□□□□ -1.35
Scaf1Q5U4C3 Gm29448-201ENSMUST00000186675 615 ntBASIC6.6□□□□□ -1.35
Scaf1Q5U4C3 Gm29314-201ENSMUST00000186800 615 ntBASIC6.6□□□□□ -1.35
Scaf1Q5U4C3 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC6.6□□□□□ -1.35
Scaf1Q5U4C3 Gm28253-202ENSMUST00000187971 615 ntBASIC6.6□□□□□ -1.35
Scaf1Q5U4C3 Gm29352-201ENSMUST00000188054 544 ntBASIC6.6□□□□□ -1.35
Scaf1Q5U4C3 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Scaf1Q5U4C3 Gm29169-201ENSMUST00000189835 615 ntBASIC6.6□□□□□ -1.35
Scaf1Q5U4C3 Gm36891-201ENSMUST00000191995 655 ntBASIC6.6□□□□□ -1.35
Scaf1Q5U4C3 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Scaf1Q5U4C3 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Scaf1Q5U4C3 Gm18540-201ENSMUST00000204025 526 ntBASIC6.6□□□□□ -1.35
Scaf1Q5U4C3 Gm44648-201ENSMUST00000208267 329 ntBASIC6.6□□□□□ -1.35
Scaf1Q5U4C3 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC6.6□□□□□ -1.35
Scaf1Q5U4C3 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Scaf1Q5U4C3 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Scaf1Q5U4C3 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Scaf1Q5U4C3 Gm26447-201ENSMUST00000082448 129 ntBASIC6.6□□□□□ -1.35
Scaf1Q5U4C3 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Scaf1Q5U4C3 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Scaf1Q5U4C3 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Scaf1Q5U4C3 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Scaf1Q5U4C3 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC6.6□□□□□ -1.35
Scaf1Q5U4C3 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
Scaf1Q5U4C3 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Scaf1Q5U4C3 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Scaf1Q5U4C3 Gm44821-201ENSMUST00000208212 2002 ntBASIC6.59□□□□□ -1.35
Scaf1Q5U4C3 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Scaf1Q5U4C3 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Scaf1Q5U4C3 Gm7957-201ENSMUST00000207404 2602 ntBASIC6.59□□□□□ -1.35
Scaf1Q5U4C3 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
Scaf1Q5U4C3 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC6.59□□□□□ -1.35
Scaf1Q5U4C3 Gm13321-201ENSMUST00000117101 400 ntBASIC6.59□□□□□ -1.35
Scaf1Q5U4C3 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC6.59□□□□□ -1.35
Scaf1Q5U4C3 Gm7327-201ENSMUST00000120925 652 ntBASIC6.59□□□□□ -1.35
Scaf1Q5U4C3 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC6.59□□□□□ -1.35
Scaf1Q5U4C3 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC6.59□□□□□ -1.35
Scaf1Q5U4C3 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC6.59□□□□□ -1.35
Scaf1Q5U4C3 Gm23542-201ENSMUST00000158208 96 ntBASIC6.59□□□□□ -1.35
Scaf1Q5U4C3 Gm29330-201ENSMUST00000190032 699 ntBASIC6.59□□□□□ -1.35
Scaf1Q5U4C3 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC6.59□□□□□ -1.35
Scaf1Q5U4C3 Gm37128-201ENSMUST00000192599 232 ntBASIC6.59□□□□□ -1.35
Scaf1Q5U4C3 Gm37961-201ENSMUST00000192729 299 ntBASIC6.59□□□□□ -1.35
Scaf1Q5U4C3 Gm10292-202ENSMUST00000193165 585 ntBASIC6.59□□□□□ -1.35
Scaf1Q5U4C3 Gm44349-201ENSMUST00000197048 123 ntBASIC6.59□□□□□ -1.35
Scaf1Q5U4C3 Mir7227-201ENSMUST00000200408 59 ntBASIC6.59□□□□□ -1.35
Scaf1Q5U4C3 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC6.59□□□□□ -1.35
Scaf1Q5U4C3 Gm44655-201ENSMUST00000207768 423 ntBASIC6.59□□□□□ -1.35
Scaf1Q5U4C3 AC124729.1-201ENSMUST00000225327 976 ntBASIC6.59□□□□□ -1.35
Scaf1Q5U4C3 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Scaf1Q5U4C3 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Scaf1Q5U4C3 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC6.59□□□□□ -1.36
Scaf1Q5U4C3 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Scaf1Q5U4C3 CT030170.3-201ENSMUST00000221205 1815 ntBASIC6.58□□□□□ -1.36
Scaf1Q5U4C3 Gm24371-201ENSMUST00000122662 267 ntBASIC6.58□□□□□ -1.36
Scaf1Q5U4C3 Gm6969-201ENSMUST00000140065 342 ntBASIC6.58□□□□□ -1.36
Scaf1Q5U4C3 Gm22843-201ENSMUST00000157710 134 ntBASIC6.58□□□□□ -1.36
Scaf1Q5U4C3 Gm25606-201ENSMUST00000158363 95 ntBASIC6.58□□□□□ -1.36
Scaf1Q5U4C3 Mir5129-201ENSMUST00000174938 78 ntBASIC6.58□□□□□ -1.36
Scaf1Q5U4C3 Gm23047-201ENSMUST00000177661 94 ntBASIC6.58□□□□□ -1.36
Scaf1Q5U4C3 Gm24168-201ENSMUST00000178825 107 ntBASIC6.58□□□□□ -1.36
Scaf1Q5U4C3 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC6.58□□□□□ -1.36
Scaf1Q5U4C3 Gm28118-201ENSMUST00000185957 294 ntBASIC6.58□□□□□ -1.36
Scaf1Q5U4C3 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC6.58□□□□□ -1.36
Scaf1Q5U4C3 Gm7652-201ENSMUST00000200440 1151 ntBASIC6.58□□□□□ -1.36
Scaf1Q5U4C3 Gm18423-201ENSMUST00000205144 1074 ntBASIC6.58□□□□□ -1.36
Scaf1Q5U4C3 Gm44523-201ENSMUST00000205616 417 ntBASIC6.58□□□□□ -1.36
Scaf1Q5U4C3 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC6.58□□□□□ -1.36
Scaf1Q5U4C3 Gm46369-201ENSMUST00000221577 401 ntBASIC6.58□□□□□ -1.36
Scaf1Q5U4C3 AL606472.1-201ENSMUST00000224628 275 ntBASIC6.58□□□□□ -1.36
Scaf1Q5U4C3 AC101945.3-201ENSMUST00000226568 153 ntBASIC6.58□□□□□ -1.36
Scaf1Q5U4C3 Gm23721-201ENSMUST00000083005 107 ntBASIC6.58□□□□□ -1.36
Scaf1Q5U4C3 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Scaf1Q5U4C3 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC6.58□□□□□ -1.36
Scaf1Q5U4C3 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
Scaf1Q5U4C3 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Scaf1Q5U4C3 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Scaf1Q5U4C3 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Scaf1Q5U4C3 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scaf1Q5U4C3 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Scaf1Q5U4C3 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scaf1Q5U4C3 Gm43259-201ENSMUST00000198446 3277 ntBASIC6.57□□□□□ -1.36
Scaf1Q5U4C3 Gm43696-201ENSMUST00000199385 6071 ntBASIC6.57□□□□□ -1.36
Scaf1Q5U4C3 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC6.57□□□□□ -1.36
Scaf1Q5U4C3 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scaf1Q5U4C3 Gm13491-201ENSMUST00000118267 235 ntBASIC6.57□□□□□ -1.36
Scaf1Q5U4C3 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC6.57□□□□□ -1.36
Scaf1Q5U4C3 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC6.57□□□□□ -1.36
Scaf1Q5U4C3 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Scaf1Q5U4C3 Gm17162-201ENSMUST00000168538 473 ntBASIC6.57□□□□□ -1.36
Scaf1Q5U4C3 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms