Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gm44076-201ENSMUST00000203072 520 ntBASIC2.05□□□□□ -2.08
Trav6d-4Q5R1I0 Gm43922-201ENSMUST00000205071 328 ntBASIC2.05□□□□□ -2.08
Trav6d-4Q5R1I0 Gm18015-201ENSMUST00000214879 316 ntBASIC2.05□□□□□ -2.08
Trav6d-4Q5R1I0 AC129323.1-201ENSMUST00000216733 470 ntBASIC2.05□□□□□ -2.08
Trav6d-4Q5R1I0 Gm7753-201ENSMUST00000221007 867 ntBASIC2.05□□□□□ -2.08
Trav6d-4Q5R1I0 Gm5374-201ENSMUST00000222868 657 ntBASIC2.05□□□□□ -2.08
Trav6d-4Q5R1I0 Gm4945-201ENSMUST00000075152 453 ntBASIC2.05□□□□□ -2.08
Trav6d-4Q5R1I0 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
Trav6d-4Q5R1I0 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Trav6d-4Q5R1I0 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Trav6d-4Q5R1I0 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC2.05□□□□□ -2.08
Trav6d-4Q5R1I0 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
Trav6d-4Q5R1I0 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.04□□□□□ -2.08
Trav6d-4Q5R1I0 Gm15025-201ENSMUST00000118434 418 ntBASIC2.04□□□□□ -2.08
Trav6d-4Q5R1I0 Gm12448-201ENSMUST00000118852 655 ntBASIC2.04□□□□□ -2.08
Trav6d-4Q5R1I0 Gm11582-201ENSMUST00000121041 236 ntBASIC2.04□□□□□ -2.08
Trav6d-4Q5R1I0 Gm13210-201ENSMUST00000121483 273 ntBASIC2.04□□□□□ -2.08
Trav6d-4Q5R1I0 Gm15065-201ENSMUST00000121699 273 ntBASIC2.04□□□□□ -2.08
Trav6d-4Q5R1I0 Gm14421-201ENSMUST00000121755 1958 ntBASIC2.04□□□□□ -2.08
Trav6d-4Q5R1I0 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Trav6d-4Q5R1I0 Gm23470-201ENSMUST00000157129 120 ntBASIC2.04□□□□□ -2.08
Trav6d-4Q5R1I0 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
Trav6d-4Q5R1I0 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Trav6d-4Q5R1I0 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC2.04□□□□□ -2.08
Trav6d-4Q5R1I0 Gm23963-201ENSMUST00000179603 77 ntBASIC2.04□□□□□ -2.08
Trav6d-4Q5R1I0 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC2.04□□□□□ -2.08
Trav6d-4Q5R1I0 Gm3852-201ENSMUST00000182781 264 ntBASIC2.04□□□□□ -2.08
Trav6d-4Q5R1I0 Mir6405-201ENSMUST00000184584 124 ntBASIC2.04□□□□□ -2.08
Trav6d-4Q5R1I0 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Trav6d-4Q5R1I0 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.04□□□□□ -2.08
Trav6d-4Q5R1I0 Gm36994-201ENSMUST00000192941 492 ntBASIC2.04□□□□□ -2.08
Trav6d-4Q5R1I0 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
Trav6d-4Q5R1I0 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.04□□□□□ -2.08
Trav6d-4Q5R1I0 Mir142-201ENSMUST00000198092 64 ntBASIC2.04□□□□□ -2.08
Trav6d-4Q5R1I0 Gm19244-201ENSMUST00000204340 253 ntBASIC2.04□□□□□ -2.08
Trav6d-4Q5R1I0 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC2.04□□□□□ -2.08
Trav6d-4Q5R1I0 Gm8679-201ENSMUST00000210651 1036 ntBASIC2.04□□□□□ -2.08
Trav6d-4Q5R1I0 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.04□□□□□ -2.08
Trav6d-4Q5R1I0 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Trav6d-4Q5R1I0 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Trav6d-4Q5R1I0 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Trav6d-4Q5R1I0 AC132260.2-201ENSMUST00000224482 344 ntBASIC2.04□□□□□ -2.08
Trav6d-4Q5R1I0 Gm4017-201ENSMUST00000084813 338 ntBASIC2.04□□□□□ -2.08
Trav6d-4Q5R1I0 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Trav6d-4Q5R1I0 Gm44789-201ENSMUST00000207195 3101 ntBASIC2.04□□□□□ -2.08
Trav6d-4Q5R1I0 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.04□□□□□ -2.08
Trav6d-4Q5R1I0 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Trav6d-4Q5R1I0 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Trav6d-4Q5R1I0 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
Trav6d-4Q5R1I0 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
Trav6d-4Q5R1I0 Gm18493-201ENSMUST00000192084 1612 ntBASIC2.03□□□□□ -2.08
Trav6d-4Q5R1I0 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Trav6d-4Q5R1I0 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Trav6d-4Q5R1I0 Gm14125-201ENSMUST00000113442 680 ntBASIC2.03□□□□□ -2.08
Trav6d-4Q5R1I0 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Trav6d-4Q5R1I0 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Trav6d-4Q5R1I0 Gm25863-201ENSMUST00000158249 329 ntBASIC2.03□□□□□ -2.08
Trav6d-4Q5R1I0 Gm22766-201ENSMUST00000158372 99 ntBASIC2.03□□□□□ -2.08
Trav6d-4Q5R1I0 Gm22858-201ENSMUST00000174972 76 ntBASIC2.03□□□□□ -2.08
Trav6d-4Q5R1I0 Gm27025-201ENSMUST00000182392 942 ntBASIC2.03□□□□□ -2.08
Trav6d-4Q5R1I0 Mir8103-201ENSMUST00000183945 107 ntBASIC2.03□□□□□ -2.08
Trav6d-4Q5R1I0 Gm8392-201ENSMUST00000185647 835 ntBASIC2.03□□□□□ -2.08
Trav6d-4Q5R1I0 Gm19224-201ENSMUST00000190477 793 ntBASIC2.03□□□□□ -2.08
Trav6d-4Q5R1I0 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Trav6d-4Q5R1I0 Gm7726-201ENSMUST00000206241 231 ntBASIC2.03□□□□□ -2.08
Trav6d-4Q5R1I0 Gm45192-201ENSMUST00000206749 283 ntBASIC2.03□□□□□ -2.08
Trav6d-4Q5R1I0 AC153899.1-201ENSMUST00000214092 1117 ntBASIC2.03□□□□□ -2.08
Trav6d-4Q5R1I0 Gm19563-201ENSMUST00000222031 270 ntBASIC2.03□□□□□ -2.08
Trav6d-4Q5R1I0 Gm18026-201ENSMUST00000222789 727 ntBASIC2.03□□□□□ -2.08
Trav6d-4Q5R1I0 AC098719.1-201ENSMUST00000228920 371 ntBASIC2.03□□□□□ -2.08
Trav6d-4Q5R1I0 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Trav6d-4Q5R1I0 Snord7-201ENSMUST00000083781 97 ntBASIC2.03□□□□□ -2.08
Trav6d-4Q5R1I0 Gm23847-201ENSMUST00000083829 110 ntBASIC2.03□□□□□ -2.08
Trav6d-4Q5R1I0 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Trav6d-4Q5R1I0 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Trav6d-4Q5R1I0 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC2.03□□□□□ -2.09
Trav6d-4Q5R1I0 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
Trav6d-4Q5R1I0 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.02□□□□□ -2.09
Trav6d-4Q5R1I0 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Trav6d-4Q5R1I0 AC154552.6-201ENSMUST00000221365 1342 ntBASIC2.02□□□□□ -2.09
Trav6d-4Q5R1I0 Gm22072-201ENSMUST00000116850 121 ntBASIC2.02□□□□□ -2.09
Trav6d-4Q5R1I0 Gm12492-201ENSMUST00000117665 564 ntBASIC2.02□□□□□ -2.09
Trav6d-4Q5R1I0 Gm12443-201ENSMUST00000122308 323 ntBASIC2.02□□□□□ -2.09
Trav6d-4Q5R1I0 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.02□□□□□ -2.09
Trav6d-4Q5R1I0 Gm24780-201ENSMUST00000157635 143 ntBASIC2.02□□□□□ -2.09
Trav6d-4Q5R1I0 Gm22517-201ENSMUST00000158265 136 ntBASIC2.02□□□□□ -2.09
Trav6d-4Q5R1I0 Gm23005-201ENSMUST00000158950 136 ntBASIC2.02□□□□□ -2.09
Trav6d-4Q5R1I0 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC2.02□□□□□ -2.09
Trav6d-4Q5R1I0 Gm28637-201ENSMUST00000179424 345 ntBASIC2.02□□□□□ -2.09
Trav6d-4Q5R1I0 Gm27369-201ENSMUST00000185182 71 ntBASIC2.02□□□□□ -2.09
Trav6d-4Q5R1I0 Gm42818-201ENSMUST00000198869 987 ntBASIC2.02□□□□□ -2.09
Trav6d-4Q5R1I0 Gm44903-201ENSMUST00000206840 130 ntBASIC2.02□□□□□ -2.09
Trav6d-4Q5R1I0 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
Trav6d-4Q5R1I0 AC140785.1-201ENSMUST00000217782 383 ntBASIC2.02□□□□□ -2.09
Trav6d-4Q5R1I0 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.02□□□□□ -2.09
Trav6d-4Q5R1I0 AC153662.1-201ENSMUST00000222220 270 ntBASIC2.02□□□□□ -2.09
Trav6d-4Q5R1I0 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.02□□□□□ -2.09
Trav6d-4Q5R1I0 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.02□□□□□ -2.09
Trav6d-4Q5R1I0 AC173481.1-201ENSMUST00000223351 270 ntBASIC2.02□□□□□ -2.09
Trav6d-4Q5R1I0 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms