Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm27599-201ENSMUST00000183758 174 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Gm27161-201ENSMUST00000183960 562 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Mir6383-201ENSMUST00000184545 116 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Gm28802-201ENSMUST00000188624 944 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Gm18956-201ENSMUST00000192857 480 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Gm37701-201ENSMUST00000192947 1100 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Gm44223-201ENSMUST00000204854 114 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Gm44520-201ENSMUST00000205447 802 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Gm7675-201ENSMUST00000208828 686 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 AC123835.1-201ENSMUST00000214362 670 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Gm9309-201ENSMUST00000223537 546 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 AC158525.1-201ENSMUST00000223806 576 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 AC091783.5-201ENSMUST00000224928 671 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 AC158981.3-201ENSMUST00000226844 1024 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Gm23136-201ENSMUST00000083425 99 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Gm43216-201ENSMUST00000196295 1333 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Gm44120-201ENSMUST00000203022 3023 ntBASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Trav3-3Q5R1C3 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Gm42721-201ENSMUST00000197165 1523 ntBASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Gm23577-201ENSMUST00000103950 110 ntBASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Mir878-201ENSMUST00000104680 78 ntBASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Gm22486-201ENSMUST00000116815 137 ntBASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Gm14566-201ENSMUST00000118915 321 ntBASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Gm5762-201ENSMUST00000119204 258 ntBASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Gm7209-201ENSMUST00000122339 333 ntBASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Gm14129-201ENSMUST00000122436 291 ntBASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Gm25105-201ENSMUST00000122477 130 ntBASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Gm25999-201ENSMUST00000175398 133 ntBASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Gm22120-201ENSMUST00000175590 70 ntBASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Gm18397-201ENSMUST00000176704 587 ntBASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Gm13147-202ENSMUST00000177526 1173 ntBASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Mir6411-201ENSMUST00000183556 108 ntBASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Mir7074-201ENSMUST00000183884 63 ntBASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Gm27964-201ENSMUST00000185195 62 ntBASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Gm28650-201ENSMUST00000188413 411 ntBASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Gm37239-201ENSMUST00000193510 141 ntBASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Gm37732-201ENSMUST00000194377 316 ntBASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Gm31520-201ENSMUST00000203048 733 ntBASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Gm44061-201ENSMUST00000203962 1195 ntBASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Gm20948-201ENSMUST00000211091 449 ntBASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Gm25480-201ENSMUST00000083217 133 ntBASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Gm45884-201ENSMUST00000209540 3416 ntBASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Trav3-3Q5R1C3 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.37□□□□□ -2.03
Trav3-3Q5R1C3 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Trav3-3Q5R1C3 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
Trav3-3Q5R1C3 Snord14c-201ENSMUST00000101927 86 ntBASIC2.37□□□□□ -2.03
Trav3-3Q5R1C3 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Trav3-3Q5R1C3 Gm24987-201ENSMUST00000104453 134 ntBASIC2.37□□□□□ -2.03
Trav3-3Q5R1C3 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.37□□□□□ -2.03
Trav3-3Q5R1C3 Gm7429-201ENSMUST00000118664 348 ntBASIC2.37□□□□□ -2.03
Trav3-3Q5R1C3 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Trav3-3Q5R1C3 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC2.37□□□□□ -2.03
Trav3-3Q5R1C3 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC2.37□□□□□ -2.03
Trav3-3Q5R1C3 Gm22839-201ENSMUST00000158436 304 ntBASIC2.37□□□□□ -2.03
Trav3-3Q5R1C3 Gm23112-201ENSMUST00000158606 125 ntBASIC2.37□□□□□ -2.03
Trav3-3Q5R1C3 Gm20399-201ENSMUST00000174652 132 ntBASIC2.37□□□□□ -2.03
Trav3-3Q5R1C3 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms