Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Rnf180Q3U827 Gm37630-201ENSMUST00000194210 1456 ntBASIC4.93□□□□□ -1.62
Rnf180Q3U827 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Rnf180Q3U827 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Rnf180Q3U827 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Rnf180Q3U827 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Rnf180Q3U827 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Rnf180Q3U827 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Rnf180Q3U827 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Rnf180Q3U827 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Rnf180Q3U827 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Rnf180Q3U827 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Rnf180Q3U827 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
Rnf180Q3U827 CT009733.2-202ENSMUST00000224171 4748 ntBASIC4.92□□□□□ -1.62
Rnf180Q3U827 Gm43594-201ENSMUST00000201153 3442 ntBASIC4.92□□□□□ -1.62
Rnf180Q3U827 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Rnf180Q3U827 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.92□□□□□ -1.62
Rnf180Q3U827 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Rnf180Q3U827 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC4.92□□□□□ -1.62
Rnf180Q3U827 Gm14385-201ENSMUST00000116315 876 ntBASIC4.92□□□□□ -1.62
Rnf180Q3U827 Gm12386-201ENSMUST00000117380 688 ntBASIC4.92□□□□□ -1.62
Rnf180Q3U827 Gm12793-201ENSMUST00000119268 292 ntBASIC4.92□□□□□ -1.62
Rnf180Q3U827 Gm13804-201ENSMUST00000119552 172 ntBASIC4.92□□□□□ -1.62
Rnf180Q3U827 Gm15926-201ENSMUST00000120492 550 ntBASIC4.92□□□□□ -1.62
Rnf180Q3U827 Gm14915-201ENSMUST00000120747 204 ntBASIC4.92□□□□□ -1.62
Rnf180Q3U827 Gm26027-201ENSMUST00000122725 268 ntBASIC4.92□□□□□ -1.62
Rnf180Q3U827 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC4.92□□□□□ -1.62
Rnf180Q3U827 Gm22563-201ENSMUST00000157333 269 ntBASIC4.92□□□□□ -1.62
Rnf180Q3U827 Gm26045-201ENSMUST00000157862 97 ntBASIC4.92□□□□□ -1.62
Rnf180Q3U827 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Rnf180Q3U827 Gm17538-201ENSMUST00000168236 327 ntBASIC4.92□□□□□ -1.62
Rnf180Q3U827 Gm22398-201ENSMUST00000174941 125 ntBASIC4.92□□□□□ -1.62
Rnf180Q3U827 Gm25731-201ENSMUST00000175167 125 ntBASIC4.92□□□□□ -1.62
Rnf180Q3U827 Mir3112-201ENSMUST00000175431 82 ntBASIC4.92□□□□□ -1.62
Rnf180Q3U827 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Rnf180Q3U827 Gm19427-201ENSMUST00000183619 208 ntBASIC4.92□□□□□ -1.62
Rnf180Q3U827 Gm27905-201ENSMUST00000184005 207 ntBASIC4.92□□□□□ -1.62
Rnf180Q3U827 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.92□□□□□ -1.62
Rnf180Q3U827 Gm43035-201ENSMUST00000197626 517 ntBASIC4.92□□□□□ -1.62
Rnf180Q3U827 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC4.92□□□□□ -1.62
Rnf180Q3U827 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC4.92□□□□□ -1.62
Rnf180Q3U827 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC4.92□□□□□ -1.62
Rnf180Q3U827 AC152415.1-201ENSMUST00000213320 440 ntBASIC4.92□□□□□ -1.62
Rnf180Q3U827 AC154576.1-201ENSMUST00000225864 563 ntBASIC4.92□□□□□ -1.62
Rnf180Q3U827 CT009510.2-203ENSMUST00000226704 2136 ntBASIC4.92□□□□□ -1.62
Rnf180Q3U827 AC157772.2-201ENSMUST00000228202 259 ntBASIC4.92□□□□□ -1.62
Rnf180Q3U827 AC155237.2-201ENSMUST00000228487 478 ntBASIC4.92□□□□□ -1.62
Rnf180Q3U827 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Rnf180Q3U827 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Rnf180Q3U827 Gm9845-201ENSMUST00000056409 598 ntBASIC4.92□□□□□ -1.62
Rnf180Q3U827 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.92□□□□□ -1.62
Rnf180Q3U827 Gm10161-201ENSMUST00000091506 204 ntBASIC4.92□□□□□ -1.62
Rnf180Q3U827 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Rnf180Q3U827 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Rnf180Q3U827 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Rnf180Q3U827 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Rnf180Q3U827 Gm37329-201ENSMUST00000192973 2057 ntBASIC4.92□□□□□ -1.62
Rnf180Q3U827 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Rnf180Q3U827 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Rnf180Q3U827 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Rnf180Q3U827 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
Rnf180Q3U827 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Rnf180Q3U827 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Rnf180Q3U827 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Rnf180Q3U827 Gm12261-201ENSMUST00000117499 645 ntBASIC4.91□□□□□ -1.62
Rnf180Q3U827 Gm12495-201ENSMUST00000119750 447 ntBASIC4.91□□□□□ -1.62
Rnf180Q3U827 Gm11398-201ENSMUST00000120330 320 ntBASIC4.91□□□□□ -1.62
Rnf180Q3U827 Gm15899-201ENSMUST00000128586 238 ntBASIC4.91□□□□□ -1.62
Rnf180Q3U827 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC4.91□□□□□ -1.62
Rnf180Q3U827 Gm22531-201ENSMUST00000158819 140 ntBASIC4.91□□□□□ -1.62
Rnf180Q3U827 Gm16134-201ENSMUST00000161714 336 ntBASIC4.91□□□□□ -1.62
Rnf180Q3U827 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Rnf180Q3U827 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Rnf180Q3U827 Gm27161-201ENSMUST00000183960 562 ntBASIC4.91□□□□□ -1.62
Rnf180Q3U827 Mir6418-201ENSMUST00000185075 115 ntBASIC4.91□□□□□ -1.62
Rnf180Q3U827 Gm3010-201ENSMUST00000198805 448 ntBASIC4.91□□□□□ -1.62
Rnf180Q3U827 Gm44355-201ENSMUST00000200417 104 ntBASIC4.91□□□□□ -1.62
Rnf180Q3U827 Gm43440-201ENSMUST00000201957 729 ntBASIC4.91□□□□□ -1.62
Rnf180Q3U827 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Rnf180Q3U827 AC125531.1-201ENSMUST00000219849 221 ntBASIC4.91□□□□□ -1.62
Rnf180Q3U827 Gm2446-201ENSMUST00000220144 772 ntBASIC4.91□□□□□ -1.62
Rnf180Q3U827 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC4.91□□□□□ -1.62
Rnf180Q3U827 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC4.91□□□□□ -1.62
Rnf180Q3U827 AC124746.2-201ENSMUST00000226594 427 ntBASIC4.91□□□□□ -1.62
Rnf180Q3U827 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Rnf180Q3U827 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Rnf180Q3U827 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Rnf180Q3U827 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Rnf180Q3U827 AC159326.1-201ENSMUST00000219989 1302 ntBASIC4.91□□□□□ -1.62
Rnf180Q3U827 Gm28634-201ENSMUST00000191087 2613 ntBASIC4.91□□□□□ -1.62
Rnf180Q3U827 Gm37456-201ENSMUST00000193176 5837 ntBASIC4.91□□□□□ -1.62
Rnf180Q3U827 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Rnf180Q3U827 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Rnf180Q3U827 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
Rnf180Q3U827 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Rnf180Q3U827 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Rnf180Q3U827 Gm25315-201ENSMUST00000116823 121 ntBASIC4.9□□□□□ -1.63
Rnf180Q3U827 Gm23226-201ENSMUST00000116927 103 ntBASIC4.9□□□□□ -1.63
Rnf180Q3U827 Gm14926-201ENSMUST00000120650 508 ntBASIC4.9□□□□□ -1.63
Rnf180Q3U827 Gm26335-201ENSMUST00000178449 107 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms