Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC3.84□□□□□ -1.79
Col28a1Q2UY11 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC3.84□□□□□ -1.79
Col28a1Q2UY11 Gm43406-201ENSMUST00000200356 334 ntBASIC3.84□□□□□ -1.79
Col28a1Q2UY11 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC3.84□□□□□ -1.79
Col28a1Q2UY11 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC3.84□□□□□ -1.79
Col28a1Q2UY11 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC3.84□□□□□ -1.79
Col28a1Q2UY11 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC3.84□□□□□ -1.79
Col28a1Q2UY11 AC101984.1-201ENSMUST00000219639 402 ntBASIC3.84□□□□□ -1.79
Col28a1Q2UY11 CT009713.4-201ENSMUST00000224246 272 ntBASIC3.84□□□□□ -1.79
Col28a1Q2UY11 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.84□□□□□ -1.79
Col28a1Q2UY11 AC154598.1-201ENSMUST00000227079 347 ntBASIC3.84□□□□□ -1.79
Col28a1Q2UY11 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Col28a1Q2UY11 n-R5s160-201ENSMUST00000083096 120 ntBASIC3.84□□□□□ -1.79
Col28a1Q2UY11 Gm25859-201ENSMUST00000083710 91 ntBASIC3.84□□□□□ -1.79
Col28a1Q2UY11 Gm22868-201ENSMUST00000083955 164 ntBASIC3.84□□□□□ -1.79
Col28a1Q2UY11 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Col28a1Q2UY11 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.84□□□□□ -1.79
Col28a1Q2UY11 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Col28a1Q2UY11 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Col28a1Q2UY11 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
Col28a1Q2UY11 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Col28a1Q2UY11 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Col28a1Q2UY11 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Col28a1Q2UY11 Gm43882-201ENSMUST00000204871 2264 ntBASIC3.83□□□□□ -1.8
Col28a1Q2UY11 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Col28a1Q2UY11 Gm5347-201ENSMUST00000210542 2327 ntBASIC3.83□□□□□ -1.8
Col28a1Q2UY11 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col28a1Q2UY11 Gm43834-201ENSMUST00000197097 4830 ntBASIC3.83□□□□□ -1.8
Col28a1Q2UY11 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Col28a1Q2UY11 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.83□□□□□ -1.8
Col28a1Q2UY11 Gm4736-201ENSMUST00000100870 380 ntBASIC3.83□□□□□ -1.8
Col28a1Q2UY11 Gm16100-201ENSMUST00000120489 231 ntBASIC3.83□□□□□ -1.8
Col28a1Q2UY11 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC3.83□□□□□ -1.8
Col28a1Q2UY11 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC3.83□□□□□ -1.8
Col28a1Q2UY11 Gm8121-201ENSMUST00000153583 499 ntBASIC3.83□□□□□ -1.8
Col28a1Q2UY11 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Col28a1Q2UY11 Gm22158-201ENSMUST00000158411 126 ntBASIC3.83□□□□□ -1.8
Col28a1Q2UY11 Gm9071-201ENSMUST00000165915 474 ntBASIC3.83□□□□□ -1.8
Col28a1Q2UY11 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC3.83□□□□□ -1.8
Col28a1Q2UY11 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC3.83□□□□□ -1.8
Col28a1Q2UY11 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC3.83□□□□□ -1.8
Col28a1Q2UY11 Gm19427-201ENSMUST00000183619 208 ntBASIC3.83□□□□□ -1.8
Col28a1Q2UY11 Gm28471-201ENSMUST00000185994 615 ntBASIC3.83□□□□□ -1.8
Col28a1Q2UY11 Gm19774-201ENSMUST00000190667 114 ntBASIC3.83□□□□□ -1.8
Col28a1Q2UY11 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC3.83□□□□□ -1.8
Col28a1Q2UY11 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC3.83□□□□□ -1.8
Col28a1Q2UY11 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC3.83□□□□□ -1.8
Col28a1Q2UY11 Gm19140-201ENSMUST00000209790 421 ntBASIC3.83□□□□□ -1.8
Col28a1Q2UY11 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC3.83□□□□□ -1.8
Col28a1Q2UY11 Gm18487-201ENSMUST00000215826 878 ntBASIC3.83□□□□□ -1.8
Col28a1Q2UY11 Gm19219-201ENSMUST00000215863 724 ntBASIC3.83□□□□□ -1.8
Col28a1Q2UY11 Gm3442-201ENSMUST00000216808 710 ntBASIC3.83□□□□□ -1.8
Col28a1Q2UY11 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC3.83□□□□□ -1.8
Col28a1Q2UY11 Gm18507-201ENSMUST00000218855 525 ntBASIC3.83□□□□□ -1.8
Col28a1Q2UY11 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.83□□□□□ -1.8
Col28a1Q2UY11 AC133517.1-202ENSMUST00000224409 233 ntBASIC3.83□□□□□ -1.8
Col28a1Q2UY11 AC166095.1-203ENSMUST00000224591 233 ntBASIC3.83□□□□□ -1.8
Col28a1Q2UY11 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
Col28a1Q2UY11 Mir323-201ENSMUST00000083683 86 ntBASIC3.83□□□□□ -1.8
Col28a1Q2UY11 Gm15095-201ENSMUST00000118996 1430 ntBASIC3.83□□□□□ -1.8
Col28a1Q2UY11 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Col28a1Q2UY11 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
Col28a1Q2UY11 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col28a1Q2UY11 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Col28a1Q2UY11 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col28a1Q2UY11 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
Col28a1Q2UY11 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Col28a1Q2UY11 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Col28a1Q2UY11 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Col28a1Q2UY11 Gm5248-201ENSMUST00000186108 4046 ntBASIC3.82□□□□□ -1.8
Col28a1Q2UY11 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Col28a1Q2UY11 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC3.82□□□□□ -1.8
Col28a1Q2UY11 AC131720.1-201ENSMUST00000218629 2132 ntBASIC3.82□□□□□ -1.8
Col28a1Q2UY11 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Col28a1Q2UY11 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Col28a1Q2UY11 AC162910.1-201ENSMUST00000221219 1723 ntBASIC3.82□□□□□ -1.8
Col28a1Q2UY11 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Col28a1Q2UY11 Gm7646-201ENSMUST00000198590 1346 ntBASIC3.82□□□□□ -1.8
Col28a1Q2UY11 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC3.82□□□□□ -1.8
Col28a1Q2UY11 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Col28a1Q2UY11 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Col28a1Q2UY11 Mir669g-201ENSMUST00000116809 123 ntBASIC3.82□□□□□ -1.8
Col28a1Q2UY11 Gm14638-201ENSMUST00000121338 216 ntBASIC3.82□□□□□ -1.8
Col28a1Q2UY11 Gm22988-201ENSMUST00000122759 144 ntBASIC3.82□□□□□ -1.8
Col28a1Q2UY11 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC3.82□□□□□ -1.8
Col28a1Q2UY11 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Col28a1Q2UY11 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC3.82□□□□□ -1.8
Col28a1Q2UY11 Gm25908-201ENSMUST00000157624 98 ntBASIC3.82□□□□□ -1.8
Col28a1Q2UY11 Gm22534-201ENSMUST00000158173 104 ntBASIC3.82□□□□□ -1.8
Col28a1Q2UY11 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Col28a1Q2UY11 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Col28a1Q2UY11 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Col28a1Q2UY11 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC3.82□□□□□ -1.8
Col28a1Q2UY11 Gm43494-201ENSMUST00000197672 388 ntBASIC3.82□□□□□ -1.8
Col28a1Q2UY11 Gm43142-201ENSMUST00000198670 361 ntBASIC3.82□□□□□ -1.8
Col28a1Q2UY11 Gm44409-201ENSMUST00000198810 166 ntBASIC3.82□□□□□ -1.8
Col28a1Q2UY11 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC3.82□□□□□ -1.8
Col28a1Q2UY11 Gm6929-201ENSMUST00000210930 468 ntBASIC3.82□□□□□ -1.8
Col28a1Q2UY11 Gm7948-201ENSMUST00000212607 844 ntBASIC3.82□□□□□ -1.8
Col28a1Q2UY11 Gm5023-201ENSMUST00000217442 587 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms