Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Col6a1Q04857 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Col6a1Q04857 Snord72-201ENSMUST00000104549 81 ntBASIC5.16□□□□□ -1.58
Col6a1Q04857 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a1Q04857 Gm11874-201ENSMUST00000117437 130 ntBASIC5.16□□□□□ -1.58
Col6a1Q04857 Gm14142-201ENSMUST00000117833 296 ntBASIC5.16□□□□□ -1.58
Col6a1Q04857 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC5.16□□□□□ -1.58
Col6a1Q04857 Gm12137-201ENSMUST00000119565 346 ntBASIC5.16□□□□□ -1.58
Col6a1Q04857 Gm14577-201ENSMUST00000121134 256 ntBASIC5.16□□□□□ -1.58
Col6a1Q04857 Gm25290-201ENSMUST00000122796 144 ntBASIC5.16□□□□□ -1.58
Col6a1Q04857 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a1Q04857 Gm26348-201ENSMUST00000157528 240 ntBASIC5.16□□□□□ -1.58
Col6a1Q04857 Gm24751-201ENSMUST00000157844 102 ntBASIC5.16□□□□□ -1.58
Col6a1Q04857 Gm3027-201ENSMUST00000167579 451 ntBASIC5.16□□□□□ -1.58
Col6a1Q04857 Gm3104-201ENSMUST00000171004 473 ntBASIC5.16□□□□□ -1.58
Col6a1Q04857 Mir3112-201ENSMUST00000175431 82 ntBASIC5.16□□□□□ -1.58
Col6a1Q04857 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC5.16□□□□□ -1.58
Col6a1Q04857 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC5.16□□□□□ -1.58
Col6a1Q04857 Gm22448-201ENSMUST00000179254 107 ntBASIC5.16□□□□□ -1.58
Col6a1Q04857 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC5.16□□□□□ -1.58
Col6a1Q04857 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC5.16□□□□□ -1.58
Col6a1Q04857 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC5.16□□□□□ -1.58
Col6a1Q04857 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC5.16□□□□□ -1.58
Col6a1Q04857 Gm24518-201ENSMUST00000180275 94 ntBASIC5.16□□□□□ -1.58
Col6a1Q04857 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC5.16□□□□□ -1.58
Col6a1Q04857 Gm43415-201ENSMUST00000201934 750 ntBASIC5.16□□□□□ -1.58
Col6a1Q04857 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC5.16□□□□□ -1.58
Col6a1Q04857 AC091783.4-201ENSMUST00000224940 611 ntBASIC5.16□□□□□ -1.58
Col6a1Q04857 AC113031.3-201ENSMUST00000226552 190 ntBASIC5.16□□□□□ -1.58
Col6a1Q04857 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a1Q04857 Gm10038-201ENSMUST00000077233 441 ntBASIC5.16□□□□□ -1.58
Col6a1Q04857 Gm24166-201ENSMUST00000082724 135 ntBASIC5.16□□□□□ -1.58
Col6a1Q04857 Gm26128-201ENSMUST00000083170 110 ntBASIC5.16□□□□□ -1.58
Col6a1Q04857 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC5.16□□□□□ -1.58
Col6a1Q04857 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
Col6a1Q04857 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Col6a1Q04857 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Col6a1Q04857 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC5.15□□□□□ -1.58
Col6a1Q04857 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
Col6a1Q04857 Gm29325-201ENSMUST00000190705 2528 ntBASIC5.15□□□□□ -1.58
Col6a1Q04857 Gm24403-201ENSMUST00000104616 130 ntBASIC5.15□□□□□ -1.59
Col6a1Q04857 Gm14706-201ENSMUST00000117744 255 ntBASIC5.15□□□□□ -1.59
Col6a1Q04857 Gm15211-201ENSMUST00000118932 528 ntBASIC5.15□□□□□ -1.59
Col6a1Q04857 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC5.15□□□□□ -1.59
Col6a1Q04857 Gm24780-201ENSMUST00000157635 143 ntBASIC5.15□□□□□ -1.59
Col6a1Q04857 Gm23779-201ENSMUST00000157938 64 ntBASIC5.15□□□□□ -1.59
Col6a1Q04857 Gm25714-201ENSMUST00000158626 296 ntBASIC5.15□□□□□ -1.59
Col6a1Q04857 Gm8292-201ENSMUST00000162574 396 ntBASIC5.15□□□□□ -1.59
Col6a1Q04857 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC5.15□□□□□ -1.59
Col6a1Q04857 Gm27896-201ENSMUST00000175162 317 ntBASIC5.15□□□□□ -1.59
Col6a1Q04857 Gm21842-201ENSMUST00000177552 498 ntBASIC5.15□□□□□ -1.59
Col6a1Q04857 Gm21626-201ENSMUST00000177791 498 ntBASIC5.15□□□□□ -1.59
Col6a1Q04857 Gm21562-201ENSMUST00000177888 498 ntBASIC5.15□□□□□ -1.59
Col6a1Q04857 Gm21539-201ENSMUST00000177925 498 ntBASIC5.15□□□□□ -1.59
Col6a1Q04857 Gm21599-201ENSMUST00000178249 498 ntBASIC5.15□□□□□ -1.59
Col6a1Q04857 Gm21914-201ENSMUST00000178452 498 ntBASIC5.15□□□□□ -1.59
Col6a1Q04857 Gm21723-201ENSMUST00000178692 498 ntBASIC5.15□□□□□ -1.59
Col6a1Q04857 Gm21916-201ENSMUST00000178771 498 ntBASIC5.15□□□□□ -1.59
Col6a1Q04857 Gm21801-201ENSMUST00000178865 498 ntBASIC5.15□□□□□ -1.59
Col6a1Q04857 Gm21633-201ENSMUST00000178941 498 ntBASIC5.15□□□□□ -1.59
Col6a1Q04857 Gm21821-201ENSMUST00000179646 498 ntBASIC5.15□□□□□ -1.59
Col6a1Q04857 Gm21588-201ENSMUST00000180074 498 ntBASIC5.15□□□□□ -1.59
Col6a1Q04857 Gm21780-201ENSMUST00000180128 498 ntBASIC5.15□□□□□ -1.59
Col6a1Q04857 Gm21572-201ENSMUST00000180134 498 ntBASIC5.15□□□□□ -1.59
Col6a1Q04857 Gm21529-201ENSMUST00000180175 498 ntBASIC5.15□□□□□ -1.59
Col6a1Q04857 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC5.15□□□□□ -1.59
Col6a1Q04857 Gm29370-202ENSMUST00000187476 499 ntBASIC5.15□□□□□ -1.59
Col6a1Q04857 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Col6a1Q04857 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC5.15□□□□□ -1.59
Col6a1Q04857 Gm30280-201ENSMUST00000192214 262 ntBASIC5.15□□□□□ -1.59
Col6a1Q04857 Gm37097-201ENSMUST00000193676 336 ntBASIC5.15□□□□□ -1.59
Col6a1Q04857 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Col6a1Q04857 Gm45395-201ENSMUST00000209891 559 ntBASIC5.15□□□□□ -1.59
Col6a1Q04857 Gm45730-201ENSMUST00000212560 395 ntBASIC5.15□□□□□ -1.59
Col6a1Q04857 AC161256.1-201ENSMUST00000217312 213 ntBASIC5.15□□□□□ -1.59
Col6a1Q04857 Gm46389-201ENSMUST00000223199 392 ntBASIC5.15□□□□□ -1.59
Col6a1Q04857 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Col6a1Q04857 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Col6a1Q04857 Gm42548-201ENSMUST00000202669 3933 ntBASIC5.15□□□□□ -1.59
Col6a1Q04857 Gm37930-201ENSMUST00000194308 1886 ntBASIC5.15□□□□□ -1.59
Col6a1Q04857 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col6a1Q04857 AC152981.1-201ENSMUST00000218320 2480 ntBASIC5.15□□□□□ -1.59
Col6a1Q04857 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col6a1Q04857 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col6a1Q04857 Gm45129-201ENSMUST00000208444 2224 ntBASIC5.15□□□□□ -1.59
Col6a1Q04857 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Col6a1Q04857 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col6a1Q04857 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.14□□□□□ -1.59
Col6a1Q04857 Gm8989-201ENSMUST00000184782 7275 ntBASIC5.14□□□□□ -1.59
Col6a1Q04857 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Col6a1Q04857 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Col6a1Q04857 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
Col6a1Q04857 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a1Q04857 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a1Q04857 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a1Q04857 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Col6a1Q04857 Gm25420-201ENSMUST00000104216 127 ntBASIC5.14□□□□□ -1.59
Col6a1Q04857 Gm5757-201ENSMUST00000117494 528 ntBASIC5.14□□□□□ -1.59
Col6a1Q04857 Gm14013-201ENSMUST00000119006 270 ntBASIC5.14□□□□□ -1.59
Col6a1Q04857 Gm14287-201ENSMUST00000121060 117 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 100.3 ms