Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NcanP55066 Gm25280-201ENSMUST00000157269 101 ntBASIC3.66□□□□□ -1.82
NcanP55066 Gm24198-201ENSMUST00000157812 108 ntBASIC3.66□□□□□ -1.82
NcanP55066 Gm23702-201ENSMUST00000158840 130 ntBASIC3.66□□□□□ -1.82
NcanP55066 Gm22500-201ENSMUST00000158982 99 ntBASIC3.66□□□□□ -1.82
NcanP55066 Gm17187-201ENSMUST00000164622 410 ntBASIC3.66□□□□□ -1.82
NcanP55066 Gm6395-201ENSMUST00000167639 691 ntBASIC3.66□□□□□ -1.82
NcanP55066 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC3.66□□□□□ -1.82
NcanP55066 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
NcanP55066 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NcanP55066 Gm6947-201ENSMUST00000186254 78 ntBASIC3.66□□□□□ -1.82
NcanP55066 Gm29259-201ENSMUST00000186396 694 ntBASIC3.66□□□□□ -1.82
NcanP55066 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NcanP55066 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC3.66□□□□□ -1.82
NcanP55066 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC3.66□□□□□ -1.82
NcanP55066 Gm8403-201ENSMUST00000189712 1298 ntBASIC3.66□□□□□ -1.82
NcanP55066 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC3.66□□□□□ -1.82
NcanP55066 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NcanP55066 Gm37946-201ENSMUST00000192064 347 ntBASIC3.66□□□□□ -1.82
NcanP55066 Gm37845-201ENSMUST00000194977 355 ntBASIC3.66□□□□□ -1.82
NcanP55066 Gm37987-201ENSMUST00000194999 825 ntBASIC3.66□□□□□ -1.82
NcanP55066 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC3.66□□□□□ -1.82
NcanP55066 Gm43104-201ENSMUST00000197234 311 ntBASIC3.66□□□□□ -1.82
NcanP55066 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC3.66□□□□□ -1.82
NcanP55066 Gm45912-201ENSMUST00000210646 543 ntBASIC3.66□□□□□ -1.82
NcanP55066 Gm35857-201ENSMUST00000212739 178 ntBASIC3.66□□□□□ -1.82
NcanP55066 Gm18729-201ENSMUST00000217230 621 ntBASIC3.66□□□□□ -1.82
NcanP55066 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.66□□□□□ -1.82
NcanP55066 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NcanP55066 Gm2544-201ENSMUST00000222702 756 ntBASIC3.66□□□□□ -1.82
NcanP55066 AC126275.1-201ENSMUST00000224881 446 ntBASIC3.66□□□□□ -1.82
NcanP55066 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NcanP55066 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
NcanP55066 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NcanP55066 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
NcanP55066 Gm24928-201ENSMUST00000083399 107 ntBASIC3.66□□□□□ -1.82
NcanP55066 Mir421-201ENSMUST00000083575 76 ntBASIC3.66□□□□□ -1.82
NcanP55066 Gm25897-201ENSMUST00000083709 107 ntBASIC3.66□□□□□ -1.82
NcanP55066 Gm7957-201ENSMUST00000207404 2602 ntBASIC3.66□□□□□ -1.82
NcanP55066 Gm37296-201ENSMUST00000192728 2922 ntBASIC3.66□□□□□ -1.82
NcanP55066 Gm9496-201ENSMUST00000191295 1601 ntBASIC3.66□□□□□ -1.82
NcanP55066 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
NcanP55066 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
NcanP55066 Mir669p-2-201ENSMUST00000103868 87 ntBASIC3.65□□□□□ -1.83
NcanP55066 Mir669p-1-201ENSMUST00000103884 87 ntBASIC3.65□□□□□ -1.83
NcanP55066 Gm22472-201ENSMUST00000104115 134 ntBASIC3.65□□□□□ -1.83
NcanP55066 Gm13650-201ENSMUST00000117729 433 ntBASIC3.65□□□□□ -1.83
NcanP55066 Gm16171-201ENSMUST00000118004 324 ntBASIC3.65□□□□□ -1.83
NcanP55066 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC3.65□□□□□ -1.83
NcanP55066 Gm7071-201ENSMUST00000120458 462 ntBASIC3.65□□□□□ -1.83
NcanP55066 Gm12226-201ENSMUST00000144172 876 ntBASIC3.65□□□□□ -1.83
NcanP55066 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC3.65□□□□□ -1.83
NcanP55066 Gm24190-201ENSMUST00000157976 216 ntBASIC3.65□□□□□ -1.83
NcanP55066 Gm26001-201ENSMUST00000157989 103 ntBASIC3.65□□□□□ -1.83
NcanP55066 Ear-ps10-201ENSMUST00000161871 460 ntBASIC3.65□□□□□ -1.83
NcanP55066 Gm17154-201ENSMUST00000165748 431 ntBASIC3.65□□□□□ -1.83
NcanP55066 Gm17177-201ENSMUST00000169144 483 ntBASIC3.65□□□□□ -1.83
NcanP55066 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC3.65□□□□□ -1.83
NcanP55066 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC3.65□□□□□ -1.83
NcanP55066 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC3.65□□□□□ -1.83
NcanP55066 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC3.65□□□□□ -1.83
NcanP55066 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC3.65□□□□□ -1.83
NcanP55066 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.65□□□□□ -1.83
NcanP55066 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.65□□□□□ -1.83
NcanP55066 Gm26933-201ENSMUST00000182320 827 ntBASIC3.65□□□□□ -1.83
NcanP55066 Gm6510-201ENSMUST00000195916 574 ntBASIC3.65□□□□□ -1.83
NcanP55066 Gm43142-201ENSMUST00000198670 361 ntBASIC3.65□□□□□ -1.83
NcanP55066 Gm43841-201ENSMUST00000199491 586 ntBASIC3.65□□□□□ -1.83
NcanP55066 Ighv1-79-201ENSMUST00000200152 350 ntBASIC3.65□□□□□ -1.83
NcanP55066 Gm9628-201ENSMUST00000222169 725 ntBASIC3.65□□□□□ -1.83
NcanP55066 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
NcanP55066 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
NcanP55066 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC3.65□□□□□ -1.83
NcanP55066 Mir16-2-201ENSMUST00000083672 95 ntBASIC3.65□□□□□ -1.83
NcanP55066 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC3.65□□□□□ -1.83
NcanP55066 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NcanP55066 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NcanP55066 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NcanP55066 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
NcanP55066 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NcanP55066 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
NcanP55066 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
NcanP55066 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NcanP55066 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
NcanP55066 Gm15854-201ENSMUST00000118879 808 ntBASIC3.64□□□□□ -1.83
NcanP55066 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC3.64□□□□□ -1.83
NcanP55066 Gm14333-201ENSMUST00000130484 264 ntBASIC3.64□□□□□ -1.83
NcanP55066 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC3.64□□□□□ -1.83
NcanP55066 Gm16353-201ENSMUST00000159458 1223 ntBASIC3.64□□□□□ -1.83
NcanP55066 Gm18416-201ENSMUST00000175635 1003 ntBASIC3.64□□□□□ -1.83
NcanP55066 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC3.64□□□□□ -1.83
NcanP55066 Gm21894-201ENSMUST00000179631 546 ntBASIC3.64□□□□□ -1.83
NcanP55066 Mir6413-201ENSMUST00000184049 108 ntBASIC3.64□□□□□ -1.83
NcanP55066 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NcanP55066 Gm5368-201ENSMUST00000189012 589 ntBASIC3.64□□□□□ -1.83
NcanP55066 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC3.64□□□□□ -1.83
NcanP55066 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC3.64□□□□□ -1.83
NcanP55066 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC3.64□□□□□ -1.83
NcanP55066 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NcanP55066 Gm43440-201ENSMUST00000201957 729 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms