Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Sox3P53784 CT009510.2-203ENSMUST00000226704 2136 ntBASIC3.13□□□□□ -1.91
Sox3P53784 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
Sox3P53784 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Sox3P53784 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.12□□□□□ -1.91
Sox3P53784 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Sox3P53784 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Sox3P53784 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Sox3P53784 Gm11284-201ENSMUST00000121910 1887 ntBASIC3.12□□□□□ -1.91
Sox3P53784 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.12□□□□□ -1.91
Sox3P53784 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.12□□□□□ -1.91
Sox3P53784 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Sox3P53784 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.12□□□□□ -1.91
Sox3P53784 Gm13087-201ENSMUST00000118298 256 ntBASIC3.12□□□□□ -1.91
Sox3P53784 Gm12722-201ENSMUST00000118507 493 ntBASIC3.12□□□□□ -1.91
Sox3P53784 Gm2003-201ENSMUST00000118537 636 ntBASIC3.12□□□□□ -1.91
Sox3P53784 Gm15190-201ENSMUST00000120855 276 ntBASIC3.12□□□□□ -1.91
Sox3P53784 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.12□□□□□ -1.91
Sox3P53784 Gm1989-201ENSMUST00000126244 636 ntBASIC3.12□□□□□ -1.91
Sox3P53784 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC3.12□□□□□ -1.91
Sox3P53784 Gm24780-201ENSMUST00000157635 143 ntBASIC3.12□□□□□ -1.91
Sox3P53784 Gm24958-201ENSMUST00000158009 97 ntBASIC3.12□□□□□ -1.91
Sox3P53784 Gm17061-201ENSMUST00000163167 499 ntBASIC3.12□□□□□ -1.91
Sox3P53784 Gm13147-202ENSMUST00000177526 1173 ntBASIC3.12□□□□□ -1.91
Sox3P53784 Mup-ps7-201ENSMUST00000178292 545 ntBASIC3.12□□□□□ -1.91
Sox3P53784 Mup-ps8-201ENSMUST00000178663 545 ntBASIC3.12□□□□□ -1.91
Sox3P53784 Mup-ps9-201ENSMUST00000178847 545 ntBASIC3.12□□□□□ -1.91
Sox3P53784 Mup-ps6-201ENSMUST00000179564 545 ntBASIC3.12□□□□□ -1.91
Sox3P53784 Mir6411-201ENSMUST00000183556 108 ntBASIC3.12□□□□□ -1.91
Sox3P53784 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.12□□□□□ -1.91
Sox3P53784 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.12□□□□□ -1.91
Sox3P53784 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Sox3P53784 Gm43096-201ENSMUST00000196173 421 ntBASIC3.12□□□□□ -1.91
Sox3P53784 Gm43355-201ENSMUST00000196541 346 ntBASIC3.12□□□□□ -1.91
Sox3P53784 Gm25203-202ENSMUST00000200458 216 ntBASIC3.12□□□□□ -1.91
Sox3P53784 Gm43992-201ENSMUST00000204358 197 ntBASIC3.12□□□□□ -1.91
Sox3P53784 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC3.12□□□□□ -1.91
Sox3P53784 Gm45778-201ENSMUST00000211959 153 ntBASIC3.12□□□□□ -1.91
Sox3P53784 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC3.12□□□□□ -1.91
Sox3P53784 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC3.12□□□□□ -1.91
Sox3P53784 AC144819.1-201ENSMUST00000227015 620 ntBASIC3.12□□□□□ -1.91
Sox3P53784 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Sox3P53784 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Sox3P53784 Gm25203-201ENSMUST00000082842 215 ntBASIC3.12□□□□□ -1.91
Sox3P53784 Gm21286-201ENSMUST00000098035 545 ntBASIC3.12□□□□□ -1.91
Sox3P53784 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Sox3P53784 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.12□□□□□ -1.91
Sox3P53784 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Sox3P53784 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Sox3P53784 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Sox3P53784 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Sox3P53784 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.11□□□□□ -1.91
Sox3P53784 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.11□□□□□ -1.91
Sox3P53784 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.11□□□□□ -1.91
Sox3P53784 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Sox3P53784 Gm24119-201ENSMUST00000103979 246 ntBASIC3.11□□□□□ -1.91
Sox3P53784 Gm25560-201ENSMUST00000104606 176 ntBASIC3.11□□□□□ -1.91
Sox3P53784 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
Sox3P53784 Gm13678-201ENSMUST00000118926 340 ntBASIC3.11□□□□□ -1.91
Sox3P53784 Gm13419-201ENSMUST00000121711 271 ntBASIC3.11□□□□□ -1.91
Sox3P53784 Gm14389-201ENSMUST00000140453 241 ntBASIC3.11□□□□□ -1.91
Sox3P53784 Gm22034-201ENSMUST00000157283 134 ntBASIC3.11□□□□□ -1.91
Sox3P53784 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC3.11□□□□□ -1.91
Sox3P53784 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC3.11□□□□□ -1.91
Sox3P53784 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.11□□□□□ -1.91
Sox3P53784 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC3.11□□□□□ -1.91
Sox3P53784 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC3.11□□□□□ -1.91
Sox3P53784 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC3.11□□□□□ -1.91
Sox3P53784 Gm38231-201ENSMUST00000192030 347 ntBASIC3.11□□□□□ -1.91
Sox3P53784 Gm38213-201ENSMUST00000193203 173 ntBASIC3.11□□□□□ -1.91
Sox3P53784 Trbv7-201ENSMUST00000193339 402 ntBASIC3.11□□□□□ -1.91
Sox3P53784 Trav12-4-201ENSMUST00000200663 271 ntBASIC3.11□□□□□ -1.91
Sox3P53784 Gm44332-201ENSMUST00000203712 433 ntBASIC3.11□□□□□ -1.91
Sox3P53784 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.11□□□□□ -1.91
Sox3P53784 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Sox3P53784 Gm17911-201ENSMUST00000210806 877 ntBASIC3.11□□□□□ -1.91
Sox3P53784 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.11□□□□□ -1.91
Sox3P53784 AC134335.1-201ENSMUST00000227626 329 ntBASIC3.11□□□□□ -1.91
Sox3P53784 Gm6369-201ENSMUST00000069626 412 ntBASIC3.11□□□□□ -1.91
Sox3P53784 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Sox3P53784 Gm4945-201ENSMUST00000075152 453 ntBASIC3.11□□□□□ -1.91
Sox3P53784 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Sox3P53784 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.11□□□□□ -1.91
Sox3P53784 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Sox3P53784 Gm15773-201ENSMUST00000118665 1448 ntBASIC3.1□□□□□ -1.91
Sox3P53784 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Sox3P53784 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Sox3P53784 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.1□□□□□ -1.91
Sox3P53784 Gm26145-201ENSMUST00000104476 127 ntBASIC3.1□□□□□ -1.91
Sox3P53784 Gm14731-201ENSMUST00000119216 376 ntBASIC3.1□□□□□ -1.91
Sox3P53784 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC3.1□□□□□ -1.91
Sox3P53784 Gm13273-201ENSMUST00000119737 159 ntBASIC3.1□□□□□ -1.91
Sox3P53784 Gm9001-201ENSMUST00000121642 399 ntBASIC3.1□□□□□ -1.91
Sox3P53784 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
Sox3P53784 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC3.1□□□□□ -1.91
Sox3P53784 Gm16129-201ENSMUST00000152628 486 ntBASIC3.1□□□□□ -1.91
Sox3P53784 Gm16569-201ENSMUST00000160526 314 ntBASIC3.1□□□□□ -1.91
Sox3P53784 Gm25026-201ENSMUST00000175017 188 ntBASIC3.1□□□□□ -1.91
Sox3P53784 Gm20672-201ENSMUST00000176605 261 ntBASIC3.1□□□□□ -1.91
Sox3P53784 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms